RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 MCCD1P59942 119 aaPredicted RBP13.23□□□□□ -0.29
RNF220-211ENST00000474956 CLDN10P78369 228 aa13.23□□□□□ -0.29
RNF220-211ENST00000474956 SLC29A2Q14542 456 aa13.23□□□□□ -0.29
RNF220-211ENST00000474956 PPP1R7Q15435 360 aa13.23□□□□□ -0.29
RNF220-211ENST00000474956 CCDC137Q6PK04 289 aaKnown RBP13.23□□□□□ -0.29
RNF220-211ENST00000474956 MTRF1LQ9UGC7 380 aaKnown RBP13.23□□□□□ -0.29
RNF220-211ENST00000474956 PODXLO00592 558 aa13.22□□□□□ -0.29
RNF220-211ENST00000474956 DKC1O60832 514 aaKnown RBP eCLIP13.22□□□□□ -0.29
RNF220-211ENST00000474956 PHF2O75151 1096 aa13.22□□□□□ -0.29
RNF220-211ENST00000474956 STAM2O75886 525 aa13.22□□□□□ -0.29
RNF220-211ENST00000474956 MAPK4P31152 587 aa13.22□□□□□ -0.29
RNF220-211ENST00000474956 CHRNA3P32297 505 aa13.22□□□□□ -0.29
RNF220-211ENST00000474956 RAP1GAPP47736 663 aa13.22□□□□□ -0.29
RNF220-211ENST00000474956 HADHBP55084 474 aaKnown RBP13.22□□□□□ -0.29
RNF220-211ENST00000474956 RPL7AP62424 266 aaKnown RBP13.22□□□□□ -0.29
RNF220-211ENST00000474956 NCOA4Q13772 614 aa13.22□□□□□ -0.29
RNF220-211ENST00000474956 WDR44Q5JSH3 913 aa13.22□□□□□ -0.29
RNF220-211ENST00000474956 HIBCHQ6NVY1 386 aaPredicted RBP13.22□□□□□ -0.29
RNF220-211ENST00000474956 UBL4BQ8N7F7 174 aa13.22□□□□□ -0.29
RNF220-211ENST00000474956 SEPT1Q8WYJ6 367 aa13.22□□□□□ -0.29
RNF220-211ENST00000474956 SPATA33Q96N06 139 aa13.22□□□□□ -0.29
RNF220-211ENST00000474956 TMEM109Q9BVC6 243 aa13.22□□□□□ -0.29
RNF220-211ENST00000474956 AZI2Q9H6S1 392 aa13.22□□□□□ -0.29
RNF220-211ENST00000474956 ZNF408Q9H9D4 720 aa13.22□□□□□ -0.29
RNF220-211ENST00000474956 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.22□□□□□ -0.29
RNF220-211ENST00000474956 GRHL1Q9NZI5 618 aa13.22□□□□□ -0.29
RNF220-211ENST00000474956 SLC12A4Q9UP95 1085 aa13.22□□□□□ -0.29
RNF220-211ENST00000474956 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.22□□□□□ -0.29
RNF220-211ENST00000474956 PPP2R3BQ9Y5P8 575 aa13.22□□□□□ -0.29
RNF220-211ENST00000474956 SIP14410 1827 aa13.22□□□□□ -0.29
RNF220-211ENST00000474956 MIF4GDA9UHW6 222 aaKnown RBP13.22□□□□□ -0.29
RNF220-211ENST00000474956 BRD2P25440 801 aaKnown RBP13.22□□□□□ -0.29
RNF220-211ENST00000474956 GNA15P30679 374 aa13.22□□□□□ -0.29
RNF220-211ENST00000474956 VPS41P49754 854 aa13.22□□□□□ -0.29
RNF220-211ENST00000474956 METTL7BQ6UX53 244 aa13.22□□□□□ -0.29
RNF220-211ENST00000474956 SLC13A5Q86YT5 568 aaPredicted RBP13.22□□□□□ -0.29
RNF220-211ENST00000474956 RBBP8NLQ8NC74 664 aaPredicted RBP13.22□□□□□ -0.29
RNF220-211ENST00000474956 NSRP1Q9H0G5 558 aaKnown RBP13.22□□□□□ -0.29
RNF220-211ENST00000474956 RNF19AQ9NV58 838 aa13.22□□□□□ -0.29
RNF220-211ENST00000474956 FOXO6A8MYZ6 492 aa13.21□□□□□ -0.29
RNF220-211ENST00000474956 NOP56O00567 594 aaKnown RBP13.21□□□□□ -0.29
RNF220-211ENST00000474956 THAP12O43422 761 aa13.21□□□□□ -0.29
RNF220-211ENST00000474956 MAFO75444 373 aaPredicted RBP13.21□□□□□ -0.29
RNF220-211ENST00000474956 ATP6V1G2O95670 118 aa13.21□□□□□ -0.29
RNF220-211ENST00000474956 FGFR4P22455 802 aa13.21□□□□□ -0.29
RNF220-211ENST00000474956 GTF2H1P32780 548 aa13.21□□□□□ -0.29
RNF220-211ENST00000474956 EAPPQ56P03 285 aaPredicted RBP13.21□□□□□ -0.29
RNF220-211ENST00000474956 C9orf131Q5VYM1 1079 aa13.21□□□□□ -0.29
RNF220-211ENST00000474956 LRRC34Q8IZ02 419 aa13.21□□□□□ -0.29
RNF220-211ENST00000474956 CCDC63Q8NA47 563 aa13.21□□□□□ -0.29
RNF220-211ENST00000474956 PCDHA3Q9Y5H8 950 aa13.21□□□□□ -0.29
RNF220-211ENST00000474956 CLTAP09496 248 aa13.21□□□□□ -0.29
RNF220-211ENST00000474956 TFAMQ00059 246 aaKnown RBP13.21□□□□□ -0.29
RNF220-211ENST00000474956 SF3A3Q12874 501 aaKnown RBP eCLIP13.21□□□□□ -0.294e-9■■■■□ 20.9
RNF220-211ENST00000474956 E2F5Q15329 346 aa13.21□□□□□ -0.29
RNF220-211ENST00000474956 PCYOX1Q9UHG3 505 aa13.21□□□□□ -0.29
RNF220-211ENST00000474956 POLIQ9UNA4 740 aa13.21□□□□□ -0.29
RNF220-211ENST00000474956 CFAP73A6NFT4 308 aa13.21□□□□□ -0.3
RNF220-211ENST00000474956 PI4K2BG5E9Z4 385 aa13.21□□□□□ -0.3
RNF220-211ENST00000474956 CTNNA2P26232 953 aa13.21□□□□□ -0.3
RNF220-211ENST00000474956 SSR1P43307 286 aaKnown RBP13.21□□□□□ -0.3
RNF220-211ENST00000474956 IFI35P80217 286 aaPredicted RBP13.21□□□□□ -0.3
RNF220-211ENST00000474956 TXNRD3NBQ6F5E7 133 aa13.21□□□□□ -0.3
RNF220-211ENST00000474956 MON1BQ7L1V2 547 aa13.21□□□□□ -0.3
RNF220-211ENST00000474956 CCDC105Q8IYK2 499 aa13.21□□□□□ -0.3
RNF220-211ENST00000474956 NOD2Q9HC29 1040 aa13.21□□□□□ -0.3
RNF220-211ENST00000474956 SUFUQ9UMX1 484 aa13.21□□□□□ -0.3
RNF220-211ENST00000474956 CEP83Q9Y592 693 aa13.21□□□□□ -0.3
RNF220-211ENST00000474956 PCDHB2Q9Y5E7 798 aa13.21□□□□□ -0.3
RNF220-211ENST00000474956 INO80B-WBP1J3KQ70 363 aa13.2□□□□□ -0.3
RNF220-211ENST00000474956 ABLIM1O14639 778 aa13.2□□□□□ -0.3
RNF220-211ENST00000474956 MTA2O94776 668 aa13.2□□□□□ -0.3
RNF220-211ENST00000474956 SLMAPQ14BN4 828 aa13.2□□□□□ -0.3
RNF220-211ENST00000474956 SEL1L2Q5TEA6 688 aa13.2□□□□□ -0.3
RNF220-211ENST00000474956 GPAT2Q6NUI2 795 aa13.2□□□□□ -0.3
RNF220-211ENST00000474956 TAOK1Q7L7X3 1001 aa13.2□□□□□ -0.3
RNF220-211ENST00000474956 TRPM8Q7Z2W7 1104 aa13.2□□□□□ -0.3
RNF220-211ENST00000474956 TFAP2BQ92481 460 aa13.2□□□□□ -0.3
RNF220-211ENST00000474956 CGRRF1Q99675 332 aa13.2□□□□□ -0.3
RNF220-211ENST00000474956 PRMT1Q99873 361 aaKnown RBP13.2□□□□□ -0.3
RNF220-211ENST00000474956 ELAC2Q9BQ52 826 aaKnown RBP13.2□□□□□ -0.3
RNF220-211ENST00000474956 INO80BQ9C086 356 aaPredicted RBP13.2□□□□□ -0.3
RNF220-211ENST00000474956 CCDC113Q9H0I3 377 aa13.2□□□□□ -0.3
RNF220-211ENST00000474956 CXCL16Q9H2A7 254 aa13.2□□□□□ -0.3
RNF220-211ENST00000474956 SEMA4AQ9H3S1 761 aa13.2□□□□□ -0.3
RNF220-211ENST00000474956 BAIAP2L1Q9UHR4 511 aa13.2□□□□□ -0.3
RNF220-211ENST00000474956 TP73O15350 636 aa13.2□□□□□ -0.3
RNF220-211ENST00000474956 PRKCBP05771 671 aa13.2□□□□□ -0.3
RNF220-211ENST00000474956 VIMP08670 466 aaKnown RBP13.2□□□□□ -0.3
RNF220-211ENST00000474956 ZNF286BP0CG31 522 aa13.2□□□□□ -0.3
RNF220-211ENST00000474956 NSFP46459 744 aaKnown RBP13.2□□□□□ -0.3
RNF220-211ENST00000474956 IREB2P48200 963 aaKnown RBP13.2□□□□□ -0.3
RNF220-211ENST00000474956 CDH8P55286 799 aa13.2□□□□□ -0.3
RNF220-211ENST00000474956 NOMO3P69849 1222 aa13.2□□□□□ -0.3
RNF220-211ENST00000474956 RIPK1Q13546 671 aa13.2□□□□□ -0.3
RNF220-211ENST00000474956 CELF3Q5SZQ8 465 aaKnown RBP13.2□□□□□ -0.3
RNF220-211ENST00000474956 CYP4A22Q5TCH4 519 aa13.2□□□□□ -0.3
RNF220-211ENST00000474956 CCDC25Q86WR0 208 aa13.2□□□□□ -0.3
RNF220-211ENST00000474956 RPS6KC1Q96S38 1066 aa13.2□□□□□ -0.3
RNF220-211ENST00000474956 MMP19Q99542 508 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms