RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 SLC35C1Q96A29 364 aa18.23■□□□□ 0.51
SCAF11-206ENST00000474828 EEF2KMTQ96G04 330 aa18.23■□□□□ 0.51
SCAF11-206ENST00000474828 DACH1Q9UI36 760 aa18.23■□□□□ 0.51
SCAF11-206ENST00000474828 COQ4Q9Y3A0 265 aa18.23■□□□□ 0.51
SCAF11-206ENST00000474828 C2CD2LO14523 706 aa18.22■□□□□ 0.51
SCAF11-206ENST00000474828 GABRDO14764 452 aa18.22■□□□□ 0.51
SCAF11-206ENST00000474828 ADAM12O43184 909 aa18.22■□□□□ 0.51
SCAF11-206ENST00000474828 KRT13P13646 458 aa18.22■□□□□ 0.51
SCAF11-206ENST00000474828 HOXB8P17481 243 aaPredicted RBP18.22■□□□□ 0.51
SCAF11-206ENST00000474828 DLX2Q07687 328 aaPredicted RBP18.22■□□□□ 0.51
SCAF11-206ENST00000474828 MYO1EQ12965 1108 aa18.22■□□□□ 0.51
SCAF11-206ENST00000474828 LEXMQ3ZCV2 418 aa18.22■□□□□ 0.51
SCAF11-206ENST00000474828 DSTYKQ6XUX3 929 aa18.22■□□□□ 0.51
SCAF11-206ENST00000474828 CEP57Q86XR8 500 aa18.22■□□□□ 0.51
SCAF11-206ENST00000474828 TRIM59Q8IWR1 403 aa18.22■□□□□ 0.51
SCAF11-206ENST00000474828 TMEM86AQ8N2M4 240 aa18.22■□□□□ 0.51
SCAF11-206ENST00000474828 TAF4BQ92750 862 aa18.22■□□□□ 0.51
SCAF11-206ENST00000474828 CASP10Q92851 521 aa18.22■□□□□ 0.51
SCAF11-206ENST00000474828 HPDLQ96IR7 371 aa18.22■□□□□ 0.51
SCAF11-206ENST00000474828 FAXDC2Q96IV6 333 aa18.22■□□□□ 0.51
SCAF11-206ENST00000474828 RTP3Q9BQQ7 232 aa18.22■□□□□ 0.51
SCAF11-206ENST00000474828 TMEM8AQ9HCN3 771 aa18.22■□□□□ 0.51
SCAF11-206ENST00000474828 ARMCX3Q9UH62 379 aaPredicted RBP18.22■□□□□ 0.51
SCAF11-206ENST00000474828 FBXL5Q9UKA1 691 aa18.22■□□□□ 0.51
SCAF11-206ENST00000474828 MAFFQ9ULX9 164 aa18.22■□□□□ 0.51
SCAF11-206ENST00000474828 CYB561D2O14569 222 aa18.21■□□□□ 0.51
SCAF11-206ENST00000474828 STX10O60499 249 aa18.21■□□□□ 0.51
SCAF11-206ENST00000474828 ASS1P00966 412 aaKnown RBP18.21■□□□□ 0.51
SCAF11-206ENST00000474828 KLRC2P26717 231 aa18.21■□□□□ 0.51
SCAF11-206ENST00000474828 STX17P56962 302 aa18.21■□□□□ 0.51
SCAF11-206ENST00000474828 RBM10P98175 930 aaKnown RBP18.21■□□□□ 0.51
SCAF11-206ENST00000474828 YWHAHQ04917 246 aaPredicted RBP18.21■□□□□ 0.51
SCAF11-206ENST00000474828 NCOA4Q13772 614 aa18.21■□□□□ 0.51
SCAF11-206ENST00000474828 ZNF280DQ6N043 979 aa18.21■□□□□ 0.51
SCAF11-206ENST00000474828 SYCE2Q6PIF2 218 aa18.21■□□□□ 0.51
SCAF11-206ENST00000474828 CMASQ8NFW8 434 aaPredicted RBP18.21■□□□□ 0.51
SCAF11-206ENST00000474828 ATXN2LQ8WWM7 1075 aaKnown RBP18.21■□□□□ 0.51
SCAF11-206ENST00000474828 SYAP1Q96A49 352 aaPredicted RBP18.21■□□□□ 0.51
SCAF11-206ENST00000474828 S1PR5Q9H228 398 aa18.21■□□□□ 0.51
SCAF11-206ENST00000474828 PLEKHA4Q9H4M7 779 aa18.21■□□□□ 0.51
SCAF11-206ENST00000474828 PRDM6Q9NQX0 595 aa18.21■□□□□ 0.51
SCAF11-206ENST00000474828 DZANK1Q9NVP4 752 aa18.21■□□□□ 0.51
SCAF11-206ENST00000474828 CLDND1Q9NY35 253 aa18.21■□□□□ 0.51
SCAF11-206ENST00000474828 L1RE1Q9UN81 338 aa18.21■□□□□ 0.51
SCAF11-206ENST00000474828 BRWD1Q9NSI6 2320 aa18.2■□□□□ 0.5
SCAF11-206ENST00000474828 OR6C75A6NL08 312 aa18.2■□□□□ 0.5
SCAF11-206ENST00000474828 TGM5O43548 720 aa18.2■□□□□ 0.5
SCAF11-206ENST00000474828 TACC1O75410 805 aa18.2■□□□□ 0.5
SCAF11-206ENST00000474828 CSPG5O95196 566 aa18.2■□□□□ 0.5
SCAF11-206ENST00000474828 FGFR1OPO95684 399 aaKnown RBP18.2■□□□□ 0.5
SCAF11-206ENST00000474828 POU2F2P09086 479 aa18.2■□□□□ 0.5
SCAF11-206ENST00000474828 TRIM49P0CI25 452 aa18.2■□□□□ 0.5
SCAF11-206ENST00000474828 TRIM49CP0CI26 452 aa18.2■□□□□ 0.5
SCAF11-206ENST00000474828 EPCAMP16422 314 aa18.2■□□□□ 0.5
SCAF11-206ENST00000474828 RPL17P18621 184 aaKnown RBP18.2■□□□□ 0.5
SCAF11-206ENST00000474828 MYL6P60660 151 aa18.2■□□□□ 0.5
SCAF11-206ENST00000474828 SOWAHAQ2M3V2 549 aa18.2■□□□□ 0.5
SCAF11-206ENST00000474828 SGSM1Q2NKQ1 1148 aa18.2■□□□□ 0.5
SCAF11-206ENST00000474828 TPGS2Q68CL5 300 aa18.2■□□□□ 0.5
SCAF11-206ENST00000474828 KRT39Q6A163 491 aa18.2■□□□□ 0.5
SCAF11-206ENST00000474828 OVOS1Q6IE37 1185 aa18.2■□□□□ 0.5
SCAF11-206ENST00000474828 ANKRD54Q6NXT1 300 aa18.2■□□□□ 0.5
SCAF11-206ENST00000474828 PDCL2Q8N4E4 241 aa18.2■□□□□ 0.5
SCAF11-206ENST00000474828 SMRP1Q8NCR6 262 aa18.2■□□□□ 0.5
SCAF11-206ENST00000474828 ZNF461Q8TAF7 563 aa18.2■□□□□ 0.5
SCAF11-206ENST00000474828 PPM1EQ8WY54 764 aa18.2■□□□□ 0.5
SCAF11-206ENST00000474828 SRRTQ9BXP5 876 aaKnown RBP18.2■□□□□ 0.5
SCAF11-206ENST00000474828 IGFLR1Q9H665 355 aa18.2■□□□□ 0.5
SCAF11-206ENST00000474828 THEGQ9P2T0 379 aa18.2■□□□□ 0.5
SCAF11-206ENST00000474828 DPP7Q9UHL4 492 aa18.2■□□□□ 0.5
SCAF11-206ENST00000474828 FBXW11Q9UKB1 542 aa18.2■□□□□ 0.5
SCAF11-206ENST00000474828 CDY1Q9Y6F8 540 aa18.2■□□□□ 0.5
SCAF11-206ENST00000474828 GLUD1P00367 558 aa18.19■□□□□ 0.5
SCAF11-206ENST00000474828 KRT19P08727 400 aa18.19■□□□□ 0.5
SCAF11-206ENST00000474828 SRGAP2BP0DMP2 458 aa18.19■□□□□ 0.5
SCAF11-206ENST00000474828 OR1D2P34982 312 aa18.19■□□□□ 0.5
SCAF11-206ENST00000474828 GCLMP48507 274 aa18.19■□□□□ 0.5
SCAF11-206ENST00000474828 ROR1Q01973 937 aa18.19■□□□□ 0.5
SCAF11-206ENST00000474828 SKOR2Q2VWA4 1001 aaPredicted RBP18.19■□□□□ 0.5
SCAF11-206ENST00000474828 CTXN3Q4LDR2 81 aa18.19■□□□□ 0.5
SCAF11-206ENST00000474828 WSCD1Q658N2 575 aa18.19■□□□□ 0.5
SCAF11-206ENST00000474828 CYP26C1Q6V0L0 522 aa18.19■□□□□ 0.5
SCAF11-206ENST00000474828 ENOX1Q8TC92 643 aaKnown RBP18.19■□□□□ 0.5
SCAF11-206ENST00000474828 KBTBD7Q8WVZ9 684 aa18.19■□□□□ 0.5
SCAF11-206ENST00000474828 FUCA2Q9BTY2 467 aa18.19■□□□□ 0.5
SCAF11-206ENST00000474828 THAP9Q9H5L6 903 aa18.19■□□□□ 0.5
SCAF11-206ENST00000474828 ANO10Q9NW15 660 aa18.19■□□□□ 0.5
SCAF11-206ENST00000474828 TIMM13Q9Y5L4 95 aaPredicted RBP18.19■□□□□ 0.5
SCAF11-206ENST00000474828 SNX9Q9Y5X1 595 aa18.19■□□□□ 0.5
SCAF11-206ENST00000474828 PLXNA3P51805 1871 aa18.18■□□□□ 0.5
SCAF11-206ENST00000474828 WDR27A2RRH5 827 aa18.18■□□□□ 0.5
SCAF11-206ENST00000474828 HUS1O60921 280 aa18.18■□□□□ 0.5
SCAF11-206ENST00000474828 HLA-DRAP01903 254 aa18.18■□□□□ 0.5
SCAF11-206ENST00000474828 ATF2P15336 505 aa18.18■□□□□ 0.5
SCAF11-206ENST00000474828 WARSP23381 471 aaKnown RBP18.18■□□□□ 0.5
SCAF11-206ENST00000474828 HOXA9P31269 272 aa18.18■□□□□ 0.5
SCAF11-206ENST00000474828 GPR17Q13304 367 aa18.18■□□□□ 0.5
SCAF11-206ENST00000474828 TRPC3Q13507 836 aa18.18■□□□□ 0.5
SCAF11-206ENST00000474828 UVSSAQ2YD98 709 aa18.18■□□□□ 0.5
SCAF11-206ENST00000474828 PUS10Q3MIT2 529 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms