RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 CYP11A1P05108 521 aa16.92■□□□□ 0.3
COL1A1-204ENST00000474644 GTF2F1P35269 517 aaKnown RBP eCLIP16.92■□□□□ 0.3
COL1A1-204ENST00000474644 NDUFV1P49821 464 aa16.92■□□□□ 0.3
COL1A1-204ENST00000474644 MRPL58Q14197 206 aaKnown RBP16.92■□□□□ 0.3
COL1A1-204ENST00000474644 DUSP6Q16828 381 aa16.92■□□□□ 0.3
COL1A1-204ENST00000474644 HSP90AA4PQ58FG1 418 aa16.92■□□□□ 0.3
COL1A1-204ENST00000474644 CDKAL1Q5VV42 579 aa16.92■□□□□ 0.3
COL1A1-204ENST00000474644 ZNF280DQ6N043 979 aa16.92■□□□□ 0.3
COL1A1-204ENST00000474644 MAFAQ8NHW3 353 aaPredicted RBP16.92■□□□□ 0.3
COL1A1-204ENST00000474644 CDCA3Q99618 268 aaPredicted RBP16.92■□□□□ 0.3
COL1A1-204ENST00000474644 BPIFA3Q9BQP9 254 aa16.92■□□□□ 0.3
COL1A1-204ENST00000474644 TLE6Q9H808 572 aa16.92■□□□□ 0.3
COL1A1-204ENST00000474644 VRTNQ9H8Y1 702 aa16.92■□□□□ 0.3
COL1A1-204ENST00000474644 FNIP2Q9P278 1114 aa16.92■□□□□ 0.3
COL1A1-204ENST00000474644 L1RE1Q9UN81 338 aa16.92■□□□□ 0.3
COL1A1-204ENST00000474644 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.92■□□□□ 0.3
COL1A1-204ENST00000474644 SNX9Q9Y5X1 595 aa16.92■□□□□ 0.3
COL1A1-204ENST00000474644 BACE2Q9Y5Z0 518 aa16.92■□□□□ 0.3
COL1A1-204ENST00000474644 TTC28Q96AY4 2481 aa16.91■□□□□ 0.3
COL1A1-204ENST00000474644 HUS1O60921 280 aa16.91■□□□□ 0.3
COL1A1-204ENST00000474644 CLASP2O75122 1294 aaKnown RBP16.91■□□□□ 0.3
COL1A1-204ENST00000474644 CLSTN1O94985 981 aa16.91■□□□□ 0.3
COL1A1-204ENST00000474644 OAZ2O95190 189 aa16.91■□□□□ 0.3
COL1A1-204ENST00000474644 ASS1P00966 412 aaKnown RBP16.91■□□□□ 0.3
COL1A1-204ENST00000474644 FMO5P49326 533 aa16.91■□□□□ 0.3
COL1A1-204ENST00000474644 MYL7Q01449 175 aa16.91■□□□□ 0.3
COL1A1-204ENST00000474644 YWHAHQ04917 246 aaPredicted RBP16.91■□□□□ 0.3
COL1A1-204ENST00000474644 WSCD1Q658N2 575 aa16.91■□□□□ 0.3
COL1A1-204ENST00000474644 OVOS1Q6IE37 1185 aa16.91■□□□□ 0.3
COL1A1-204ENST00000474644 RSPO2Q6UXX9 243 aaPredicted RBP16.91■□□□□ 0.3
COL1A1-204ENST00000474644 AOPEPQ8N6M6 819 aa16.91■□□□□ 0.3
COL1A1-204ENST00000474644 TOP6BLQ8N6T0 577 aa16.91■□□□□ 0.3
COL1A1-204ENST00000474644 FBXL13Q8NEE6 735 aa16.91■□□□□ 0.3
COL1A1-204ENST00000474644 PPM1EQ8WY54 764 aa16.91■□□□□ 0.3
COL1A1-204ENST00000474644 TAF4BQ92750 862 aa16.91■□□□□ 0.3
COL1A1-204ENST00000474644 ELMO3Q96BJ8 720 aa16.91■□□□□ 0.3
COL1A1-204ENST00000474644 CLSTN3Q9BQT9 956 aa16.91■□□□□ 0.3
COL1A1-204ENST00000474644 IGFLR1Q9H665 355 aa16.91■□□□□ 0.3
COL1A1-204ENST00000474644 DSEQ9UL01 958 aa16.91■□□□□ 0.3
COL1A1-204ENST00000474644 KCNJ18B7U540 433 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 H7C4K7 107 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 ADAM12O43184 909 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 TBC1D4O60343 1298 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 N4BP1O75113 896 aaKnown RBP16.9■□□□□ 0.3
COL1A1-204ENST00000474644 AFPP02771 609 aaKnown RBP16.9■□□□□ 0.3
COL1A1-204ENST00000474644 ADH1AP07327 375 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 EEF1GP26641 437 aaKnown RBP16.9■□□□□ 0.3
COL1A1-204ENST00000474644 KLRC2P26717 231 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 MTIF2P46199 727 aaKnown RBP16.9■□□□□ 0.3
COL1A1-204ENST00000474644 ZNF165P49910 485 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 TNNC1P63316 161 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 KCNH2Q12809 1159 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 KCNJ12Q14500 433 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 COL19A1Q14993 1142 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 NCAPHQ15003 741 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 SOWAHAQ2M3V2 549 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 SGSM1Q2NKQ1 1148 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 WDR72Q3MJ13 1102 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 CTXN3Q4LDR2 81 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 SPOPLQ6IQ16 392 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 SLC8B1Q6J4K2 584 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 LIMS2Q7Z4I7 341 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 CREBRFQ8IUR6 639 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 GLYCTKQ8IVS8 523 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 PDCL2Q8N4E4 241 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 EFHBQ8N7U6 833 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 VN1R2Q8NFZ6 395 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 SEMA4DQ92854 862 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 PI4K2AQ9BTU6 479 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 IMPG2Q9BZV3 1241 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 FANCLQ9NW38 375 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 MAGEC2Q9UBF1 373 aaPredicted RBP16.9■□□□□ 0.3
COL1A1-204ENST00000474644 FBXL5Q9UKA1 691 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 POLIQ9UNA4 740 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 COQ4Q9Y3A0 265 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 CDY1Q9Y6F8 540 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 MYO7AQ13402 2215 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 VCANP13611 3396 aa16.9■□□□□ 0.3
COL1A1-204ENST00000474644 FSD2A1L4K1 749 aa16.89■□□□□ 0.29
COL1A1-204ENST00000474644 PMM2O15305 246 aa16.89■□□□□ 0.29
COL1A1-204ENST00000474644 LINC01565O15544 149 aa16.89■□□□□ 0.29
COL1A1-204ENST00000474644 LRRN2O75325 713 aa16.89■□□□□ 0.29
COL1A1-204ENST00000474644 CLCN4P51793 760 aa16.89■□□□□ 0.29
COL1A1-204ENST00000474644 NOP14P78316 857 aaKnown RBP16.89■□□□□ 0.29
COL1A1-204ENST00000474644 RBM10P98175 930 aaKnown RBP16.89■□□□□ 0.29
COL1A1-204ENST00000474644 ZNF667Q5HYK9 610 aa16.89■□□□□ 0.29
COL1A1-204ENST00000474644 LLGL2Q6P1M3 1020 aa16.89■□□□□ 0.29
COL1A1-204ENST00000474644 DPH6Q7L8W6 267 aa16.89■□□□□ 0.29
COL1A1-204ENST00000474644 METTL23Q86XA0 190 aa16.89■□□□□ 0.29
COL1A1-204ENST00000474644 DHX40Q8IX18 779 aaKnown RBP16.89■□□□□ 0.29
COL1A1-204ENST00000474644 ADGRF2Q8IZF7 708 aa16.89■□□□□ 0.29
COL1A1-204ENST00000474644 TMEM86AQ8N2M4 240 aa16.89■□□□□ 0.29
COL1A1-204ENST00000474644 KBTBD7Q8WVZ9 684 aa16.89■□□□□ 0.29
COL1A1-204ENST00000474644 MMS19Q96T76 1030 aa16.89■□□□□ 0.29
COL1A1-204ENST00000474644 RTP3Q9BQQ7 232 aa16.89■□□□□ 0.29
COL1A1-204ENST00000474644 APOBEC3GQ9HC16 384 aaKnown RBP16.89■□□□□ 0.29
COL1A1-204ENST00000474644 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.89■□□□□ 0.29
COL1A1-204ENST00000474644 RAB20Q9NX57 234 aa16.89■□□□□ 0.29
COL1A1-204ENST00000474644 NXF1Q9UBU9 619 aaKnown RBP16.89■□□□□ 0.29
COL1A1-204ENST00000474644 HCFC2Q9Y5Z7 792 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms