RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 MRPS23Q9Y3D9 190 aaKnown RBP20.12■□□□□ 0.81
CCDC171-206ENST00000474193 PIRO00625 290 aa20.11■□□□□ 0.81
CCDC171-206ENST00000474193 ZNF197O14709 1029 aa20.11■□□□□ 0.81
CCDC171-206ENST00000474193 EIF3DO15371 548 aaKnown RBP eCLIP20.11■□□□□ 0.81
CCDC171-206ENST00000474193 PNPLA4P41247 253 aa20.11■□□□□ 0.81
CCDC171-206ENST00000474193 CASP5P51878 434 aa20.11■□□□□ 0.81
CCDC171-206ENST00000474193 TFAMQ00059 246 aaKnown RBP20.11■□□□□ 0.81
CCDC171-206ENST00000474193 DPYDQ12882 1025 aa20.11■□□□□ 0.81
CCDC171-206ENST00000474193 PSMD2Q13200 908 aa20.11■□□□□ 0.81
CCDC171-206ENST00000474193 PLD1Q13393 1074 aa20.11■□□□□ 0.81
CCDC171-206ENST00000474193 SURF1Q15526 300 aa20.11■□□□□ 0.81
CCDC171-206ENST00000474193 SV2CQ496J9 727 aa20.11■□□□□ 0.81
CCDC171-206ENST00000474193 CYP4A22Q5TCH4 519 aa20.11■□□□□ 0.81
CCDC171-206ENST00000474193 CRELD2Q6UXH1 353 aaPredicted RBP20.11■□□□□ 0.81
CCDC171-206ENST00000474193 MTSS1LQ765P7 747 aa20.11■□□□□ 0.81
CCDC171-206ENST00000474193 GPD1LQ8N335 351 aa20.11■□□□□ 0.81
CCDC171-206ENST00000474193 SMARCE1Q969G3 411 aa20.11■□□□□ 0.81
CCDC171-206ENST00000474193 SAAL1Q96ER3 474 aa20.11■□□□□ 0.81
CCDC171-206ENST00000474193 PCIF1Q9H4Z3 704 aa20.11■□□□□ 0.81
CCDC171-206ENST00000474193 RMND1Q9NWS8 449 aa20.11■□□□□ 0.81
CCDC171-206ENST00000474193 DUSP12Q9UNI6 340 aa20.11■□□□□ 0.81
CCDC171-206ENST00000474193 ANO9A1A5B4 782 aa20.1■□□□□ 0.81
CCDC171-206ENST00000474193 ZNF233A6NK53 670 aa20.1■□□□□ 0.81
CCDC171-206ENST00000474193 N4BP1O75113 896 aaKnown RBP20.1■□□□□ 0.81
CCDC171-206ENST00000474193 PRR29P0C7W0 189 aa20.1■□□□□ 0.81
CCDC171-206ENST00000474193 RFX1P22670 979 aa20.1■□□□□ 0.81
CCDC171-206ENST00000474193 PLA2G5P39877 138 aa20.1■□□□□ 0.81
CCDC171-206ENST00000474193 SNRPFP62306 86 aaKnown RBP20.1■□□□□ 0.81
CCDC171-206ENST00000474193 NTHL1P78549 312 aa20.1■□□□□ 0.81
CCDC171-206ENST00000474193 PNOCQ13519 176 aa20.1■□□□□ 0.81
CCDC171-206ENST00000474193 MYBPC2Q14324 1141 aa20.1■□□□□ 0.81
CCDC171-206ENST00000474193 BRSK2Q8IWQ3 736 aa20.1■□□□□ 0.81
CCDC171-206ENST00000474193 IKZF4Q9H2S9 585 aa20.1■□□□□ 0.81
CCDC171-206ENST00000474193 DNMT3BQ9UBC3 853 aaKnown RBP20.1■□□□□ 0.81
CCDC171-206ENST00000474193 INSL5Q9Y5Q6 135 aa20.1■□□□□ 0.81
CCDC171-206ENST00000474193 GOLGA8IPA6NC78 632 aa20.09■□□□□ 0.81
CCDC171-206ENST00000474193 GOLGA8JA6NMD2 632 aa20.09■□□□□ 0.81
CCDC171-206ENST00000474193 CYB561D2O14569 222 aa20.09■□□□□ 0.81
CCDC171-206ENST00000474193 GPR17Q13304 367 aa20.09■□□□□ 0.81
CCDC171-206ENST00000474193 CAMK4Q16566 473 aa20.09■□□□□ 0.81
CCDC171-206ENST00000474193 KMT5BQ4FZB7 885 aa20.09■□□□□ 0.81
CCDC171-206ENST00000474193 HS2ST1Q7LGA3 356 aa20.09■□□□□ 0.81
CCDC171-206ENST00000474193 SLC44A3Q8N4M1 653 aa20.09■□□□□ 0.81
CCDC171-206ENST00000474193 LEMD2Q8NC56 503 aa20.09■□□□□ 0.81
CCDC171-206ENST00000474193 ZNF507Q8TCN5 953 aa20.09■□□□□ 0.81
CCDC171-206ENST00000474193 FGF13Q92913 245 aa20.09■□□□□ 0.81
CCDC171-206ENST00000474193 CORO1BQ9BR76 489 aa20.09■□□□□ 0.81
CCDC171-206ENST00000474193 UBE4BO95155 1302 aa20.08■□□□□ 0.81
CCDC171-206ENST00000474193 KPNA7A9QM74 516 aa20.08■□□□□ 0.81
CCDC171-206ENST00000474193 STK25O00506 426 aa20.08■□□□□ 0.81
CCDC171-206ENST00000474193 RHOP08100 348 aa20.08■□□□□ 0.81
CCDC171-206ENST00000474193 TMEM191BP0C7N4 346 aa20.08■□□□□ 0.81
CCDC171-206ENST00000474193 AVPR2P30518 371 aa20.08■□□□□ 0.81
CCDC171-206ENST00000474193 ALDH1A3P47895 512 aa20.08■□□□□ 0.81
CCDC171-206ENST00000474193 NUBP1P53384 320 aa20.08■□□□□ 0.81
CCDC171-206ENST00000474193 EPHB3P54753 998 aa20.08■□□□□ 0.81
CCDC171-206ENST00000474193 RNF19BQ6ZMZ0 732 aa20.08■□□□□ 0.81
CCDC171-206ENST00000474193 PDZD4Q76G19 769 aaPredicted RBP20.08■□□□□ 0.81
CCDC171-206ENST00000474193 RSAD2Q8WXG1 361 aa20.08■□□□□ 0.81
CCDC171-206ENST00000474193 ANKRD36BP1Q96IX9 119 aa20.08■□□□□ 0.81
CCDC171-206ENST00000474193 GSDMAQ96QA5 445 aa20.08■□□□□ 0.81
CCDC171-206ENST00000474193 CBWD1Q9BRT8 395 aa20.08■□□□□ 0.81
CCDC171-206ENST00000474193 GTPBP4Q9BZE4 634 aaKnown RBP20.08■□□□□ 0.81
CCDC171-206ENST00000474193 IRF2BPLQ9H1B7 796 aa20.08■□□□□ 0.81
CCDC171-206ENST00000474193 NUP62CLQ9H1M0 184 aa20.08■□□□□ 0.81
CCDC171-206ENST00000474193 AVENQ9NQS1 362 aaPredicted RBP20.08■□□□□ 0.81
CCDC171-206ENST00000474193 HCFC1R1Q9NWW0 138 aa20.08■□□□□ 0.81
CCDC171-206ENST00000474193 GDE1Q9NZC3 331 aa20.08■□□□□ 0.81
CCDC171-206ENST00000474193 CGNQ9P2M7 1197 aaKnown RBP20.08■□□□□ 0.81
CCDC171-206ENST00000474193 WNT16Q9UBV4 365 aa20.08■□□□□ 0.81
CCDC171-206ENST00000474193 PPEF2O14830 753 aa20.07■□□□□ 0.8
CCDC171-206ENST00000474193 KLRC4O43908 158 aa20.07■□□□□ 0.8
CCDC171-206ENST00000474193 KIF20AO95235 890 aa20.07■□□□□ 0.8
CCDC171-206ENST00000474193 SEC24AO95486 1093 aa20.07■□□□□ 0.8
CCDC171-206ENST00000474193 TNNC2P02585 160 aa20.07■□□□□ 0.8
CCDC171-206ENST00000474193 CYP11A1P05108 521 aa20.07■□□□□ 0.8
CCDC171-206ENST00000474193 KRT19P08727 400 aa20.07■□□□□ 0.8
CCDC171-206ENST00000474193 SRFP11831 508 aa20.07■□□□□ 0.8
CCDC171-206ENST00000474193 TWF1Q12792 350 aa20.07■□□□□ 0.8
CCDC171-206ENST00000474193 KCNB1Q14721 858 aa20.07■□□□□ 0.8
CCDC171-206ENST00000474193 EFCAB13Q8IY85 973 aa20.07■□□□□ 0.8
CCDC171-206ENST00000474193 CSGALNACT2Q8N6G5 542 aa20.07■□□□□ 0.8
CCDC171-206ENST00000474193 GPT2Q8TD30 523 aa20.07■□□□□ 0.8
CCDC171-206ENST00000474193 HPS3Q969F9 1004 aa20.07■□□□□ 0.8
CCDC171-206ENST00000474193 SMOC2Q9H3U7 446 aa20.07■□□□□ 0.8
CCDC171-206ENST00000474193 CLSTN2Q9H4D0 955 aa20.07■□□□□ 0.8
CCDC171-206ENST00000474193 SLC39A2Q9NP94 309 aa20.07■□□□□ 0.8
CCDC171-206ENST00000474193 ITGA11Q9UKX5 1188 aa20.07■□□□□ 0.8
CCDC171-206ENST00000474193 AGAP1Q9UPQ3 857 aa20.07■□□□□ 0.8
CCDC171-206ENST00000474193 ANHXE9PGG2 379 aa20.06■□□□□ 0.8
CCDC171-206ENST00000474193 HUS1O60921 280 aa20.06■□□□□ 0.8
CCDC171-206ENST00000474193 RHOBTB3O94955 611 aa20.06■□□□□ 0.8
CCDC171-206ENST00000474193 RBP5P82980 135 aa20.06■□□□□ 0.8
CCDC171-206ENST00000474193 SMARCB1Q12824 385 aa20.06■□□□□ 0.8
CCDC171-206ENST00000474193 DCP1BQ8IZD4 617 aaKnown RBP20.06■□□□□ 0.8
CCDC171-206ENST00000474193 TMEM130Q8N3G9 435 aa20.06■□□□□ 0.8
CCDC171-206ENST00000474193 FLCNQ8NFG4 579 aa20.06■□□□□ 0.8
CCDC171-206ENST00000474193 ITFG1Q8TB96 612 aa20.06■□□□□ 0.8
CCDC171-206ENST00000474193 PGLYRP2Q96PD5 576 aa20.06■□□□□ 0.8
CCDC171-206ENST00000474193 FGFBP2Q9BYJ0 223 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms