RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 BEST2Q8NFU1 509 aa8.18□□□□□ -1.1
CCDC93-207ENST00000474006 URGCPQ8TCY9 931 aa8.18□□□□□ -1.1
CCDC93-207ENST00000474006 TAS1R2Q8TE23 839 aa8.18□□□□□ -1.1
CCDC93-207ENST00000474006 ANKRD36BP1Q96IX9 119 aa8.18□□□□□ -1.1
CCDC93-207ENST00000474006 RPS6KC1Q96S38 1066 aa8.18□□□□□ -1.1
CCDC93-207ENST00000474006 HINFPQ9BQA5 517 aa8.18□□□□□ -1.1
CCDC93-207ENST00000474006 CRACR2AQ9BSW2 395 aa8.18□□□□□ -1.1
CCDC93-207ENST00000474006 TRIM5Q9C035 493 aa8.18□□□□□ -1.1
CCDC93-207ENST00000474006 XPO4Q9C0E2 1151 aaKnown RBP8.18□□□□□ -1.1
CCDC93-207ENST00000474006 MTMR12Q9C0I1 747 aa8.18□□□□□ -1.1
CCDC93-207ENST00000474006 DPP3Q9NY33 737 aa8.18□□□□□ -1.1
CCDC93-207ENST00000474006 KANSL3Q9P2N6 904 aa8.18□□□□□ -1.1
CCDC93-207ENST00000474006 UBQLN1Q9UMX0 589 aaKnown RBP8.18□□□□□ -1.1
CCDC93-207ENST00000474006 PLAGL2Q9UPG8 496 aa8.18□□□□□ -1.1
CCDC93-207ENST00000474006 SLC4A7Q9Y6M7 1214 aa8.18□□□□□ -1.1
CCDC93-207ENST00000474006 WDR81Q562E7 1941 aa8.18□□□□□ -1.1
CCDC93-207ENST00000474006 TRIP12Q14669 1992 aaPredicted RBP8.18□□□□□ -1.1
CCDC93-207ENST00000474006 LOXHD1Q8IVV2 1947 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 EVPLQ92817 2033 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 TBKBP1A7MCY6 615 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 LGALS16A8MUM7 142 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 P4HA2O15460 535 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 CBFA2T2O43439 604 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 LRRN2O75325 713 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 DGKIO75912 1065 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 DDHD2O94830 711 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 VNN1O95497 513 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 KRT19P08727 400 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 TMEM191BP0C7N4 346 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 ZNF75DP51815 510 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 RBP5P82980 135 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 SOX4Q06945 474 aaPredicted RBP8.17□□□□□ -1.1
CCDC93-207ENST00000474006 KCNMA1Q12791 1236 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 CETN1Q12798 172 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 BIRC3Q13489 604 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 TRPC3Q13507 836 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 SHHQ15465 462 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 NAB2Q15742 525 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 PTPN21Q16825 1174 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 ZACNQ401N2 412 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 C9orf50Q5SZB4 431 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 FKBP15Q5T1M5 1219 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 RASIP1Q5U651 963 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 GBP6Q6ZN66 633 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 ZNF280BQ86YH2 543 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 C1orf127Q8N9H9 656 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 FBXL13Q8NEE6 735 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 CXorf38Q8TB03 319 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 PHOSPHO2Q8TCD6 241 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 SEMA4DQ92854 862 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 ZNF689Q96CS4 500 aaPredicted RBP8.17□□□□□ -1.1
CCDC93-207ENST00000474006 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.17□□□□□ -1.1
CCDC93-207ENST00000474006 SLC38A7Q9NVC3 462 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 TBC1D13Q9NVG8 400 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 RAB20Q9NX57 234 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 PLA2G2EQ9NZK7 142 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 TUBGCP4Q9UGJ1 667 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 SIX4Q9UIU6 781 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 AGAP1Q9UPQ3 857 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 COQ4Q9Y3A0 265 aa8.17□□□□□ -1.1
CCDC93-207ENST00000474006 ANO9A1A5B4 782 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 GTPBP10A4D1E9 387 aaKnown RBP8.16□□□□□ -1.1
CCDC93-207ENST00000474006 PIRO00625 290 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 XPOTO43592 962 aaKnown RBP8.16□□□□□ -1.1
CCDC93-207ENST00000474006 N4BP1O75113 896 aaKnown RBP8.16□□□□□ -1.1
CCDC93-207ENST00000474006 GJB5O95377 273 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 ADCY5O95622 1261 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 HLA-DRAP01903 254 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 ALDH2P05091 517 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 ITGB3P05106 788 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 TPM3P06753 285 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 ATP2A2P16615 1042 aaKnown RBP8.16□□□□□ -1.1
CCDC93-207ENST00000474006 SLC9A1P19634 815 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 IGFBP4P22692 258 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 IGFBP6P24592 240 aaPredicted RBP8.16□□□□□ -1.1
CCDC93-207ENST00000474006 PON1P27169 355 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 RPL9P32969 192 aaKnown RBP8.16□□□□□ -1.1
CCDC93-207ENST00000474006 KLK7P49862 253 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 MXI1P50539 228 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 MYL6P60660 151 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 MYL7Q01449 175 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 RNASELQ05823 741 aaKnown RBP8.16□□□□□ -1.1
CCDC93-207ENST00000474006 GRIK3Q13003 919 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 SYCP1Q15431 976 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 EXOC3L4Q17RC7 722 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 SGSM1Q2NKQ1 1148 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 PAN2Q504Q3 1202 aaKnown RBP8.16□□□□□ -1.1
CCDC93-207ENST00000474006 EPC2Q52LR7 807 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 C9orf57Q5W0N0 161 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 HERC6Q8IVU3 1022 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 COLGALT2Q8IYK4 626 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 SNIP1Q8TAD8 396 aaKnown RBP8.16□□□□□ -1.1
CCDC93-207ENST00000474006 LMO3Q8TAP4 145 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 RABGGTAQ92696 567 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 KAT6AQ92794 2004 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 ELMO3Q96BJ8 720 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 FAM193BQ96PV7 902 aaPredicted RBP8.16□□□□□ -1.1
CCDC93-207ENST00000474006 ERGIC2Q96RQ1 377 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 GDF15Q99988 308 aa8.16□□□□□ -1.1
CCDC93-207ENST00000474006 UBE2OQ9C0C9 1292 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms