RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 SNX9Q9Y5X1 595 aa14.8□□□□□ -0.04
USF1-205ENST00000473969 CCDC195A0A1B0GUA6 201 aa14.79□□□□□ -0.04
USF1-205ENST00000473969 IKBKBO14920 756 aa14.79□□□□□ -0.04
USF1-205ENST00000473969 STX10O60499 249 aa14.79□□□□□ -0.04
USF1-205ENST00000473969 AKAP3O75969 853 aa14.79□□□□□ -0.04
USF1-205ENST00000473969 MBD3O95983 291 aa14.79□□□□□ -0.04
USF1-205ENST00000473969 CYP11A1P05108 521 aa14.79□□□□□ -0.04
USF1-205ENST00000473969 IL9P15248 144 aa14.79□□□□□ -0.04
USF1-205ENST00000473969 ATICP31939 592 aa14.79□□□□□ -0.04
USF1-205ENST00000473969 MTHFRP42898 656 aa14.79□□□□□ -0.04
USF1-205ENST00000473969 PTPRJQ12913 1337 aa14.79□□□□□ -0.04
USF1-205ENST00000473969 PDCD11Q14690 1871 aaKnown RBP14.79□□□□□ -0.04
USF1-205ENST00000473969 ATG2AQ2TAZ0 1938 aa14.79□□□□□ -0.04
USF1-205ENST00000473969 PPM1LQ5SGD2 360 aa14.79□□□□□ -0.04
USF1-205ENST00000473969 TPGS2Q68CL5 300 aa14.79□□□□□ -0.04
USF1-205ENST00000473969 LILRA6Q6PI73 481 aa14.79□□□□□ -0.04
USF1-205ENST00000473969 TMC5Q6UXY8 1006 aa14.79□□□□□ -0.04
USF1-205ENST00000473969 C12orf76Q8N812 135 aaPredicted RBP14.79□□□□□ -0.04
USF1-205ENST00000473969 ZNF461Q8TAF7 563 aa14.79□□□□□ -0.04
USF1-205ENST00000473969 ADAMTS19Q8TE59 1207 aa14.79□□□□□ -0.04
USF1-205ENST00000473969 NELFBQ8WX92 580 aa14.79□□□□□ -0.04
USF1-205ENST00000473969 SYAP1Q96A49 352 aaPredicted RBP14.79□□□□□ -0.04
USF1-205ENST00000473969 NECTIN4Q96NY8 510 aa14.79□□□□□ -0.04
USF1-205ENST00000473969 MMS19Q96T76 1030 aa14.79□□□□□ -0.04
USF1-205ENST00000473969 ZDHHC7Q9NXF8 308 aa14.79□□□□□ -0.04
USF1-205ENST00000473969 SIX4Q9UIU6 781 aa14.79□□□□□ -0.04
USF1-205ENST00000473969 PRRG1O14668 218 aa14.78□□□□□ -0.04
USF1-205ENST00000473969 SLC16A3O15427 465 aaKnown RBP14.78□□□□□ -0.04
USF1-205ENST00000473969 ADAM12O43184 909 aa14.78□□□□□ -0.04
USF1-205ENST00000473969 FGFR1OPO95684 399 aaKnown RBP14.78□□□□□ -0.04
USF1-205ENST00000473969 C8AP07357 584 aa14.78□□□□□ -0.04
USF1-205ENST00000473969 TNNC1P63316 161 aa14.78□□□□□ -0.04
USF1-205ENST00000473969 MYL7Q01449 175 aa14.78□□□□□ -0.04
USF1-205ENST00000473969 ROR1Q01973 937 aa14.78□□□□□ -0.04
USF1-205ENST00000473969 ENPEPQ07075 957 aa14.78□□□□□ -0.04
USF1-205ENST00000473969 PAK1Q13153 545 aa14.78□□□□□ -0.04
USF1-205ENST00000473969 CBX2Q14781 532 aaPredicted RBP14.78□□□□□ -0.04
USF1-205ENST00000473969 SMAD2Q15796 467 aaKnown RBP14.78□□□□□ -0.04
USF1-205ENST00000473969 UVSSAQ2YD98 709 aa14.78□□□□□ -0.04
USF1-205ENST00000473969 WSCD1Q658N2 575 aa14.78□□□□□ -0.04
USF1-205ENST00000473969 CYP26C1Q6V0L0 522 aa14.78□□□□□ -0.04
USF1-205ENST00000473969 RTL10Q7L3V2 364 aa14.78□□□□□ -0.04
USF1-205ENST00000473969 DPH6Q7L8W6 267 aa14.78□□□□□ -0.04
USF1-205ENST00000473969 TMEM86AQ8N2M4 240 aa14.78□□□□□ -0.04
USF1-205ENST00000473969 CMASQ8NFW8 434 aaPredicted RBP14.78□□□□□ -0.04
USF1-205ENST00000473969 ZNF516Q92618 1163 aa14.78□□□□□ -0.04
USF1-205ENST00000473969 EEF2KMTQ96G04 330 aa14.78□□□□□ -0.04
USF1-205ENST00000473969 FAM84AQ96KN4 292 aa14.78□□□□□ -0.04
USF1-205ENST00000473969 UHRF1Q96T88 793 aaPredicted RBP14.78□□□□□ -0.04
USF1-205ENST00000473969 S1PR5Q9H228 398 aa14.78□□□□□ -0.04
USF1-205ENST00000473969 GDAP2Q9NXN4 497 aa14.78□□□□□ -0.04
USF1-205ENST00000473969 PRKAG3Q9UGI9 489 aa14.78□□□□□ -0.04
USF1-205ENST00000473969 DACH1Q9UI36 760 aa14.78□□□□□ -0.04
USF1-205ENST00000473969 FBXW11Q9UKB1 542 aa14.78□□□□□ -0.04
USF1-205ENST00000473969 MAFFQ9ULX9 164 aa14.78□□□□□ -0.04
USF1-205ENST00000473969 CTNND2Q9UQB3 1225 aa14.78□□□□□ -0.04
USF1-205ENST00000473969 TRIM49BA6NDI0 452 aa14.77□□□□□ -0.05
USF1-205ENST00000473969 PPP1R3GB7ZBB8 358 aa14.77□□□□□ -0.05
USF1-205ENST00000473969 TBC1D4O60343 1298 aa14.77□□□□□ -0.05
USF1-205ENST00000473969 XYLBO75191 536 aa14.77□□□□□ -0.05
USF1-205ENST00000473969 ZMYND10O75800 440 aa14.77□□□□□ -0.05
USF1-205ENST00000473969 CST3P01034 146 aaPredicted RBP14.77□□□□□ -0.05
USF1-205ENST00000473969 HNRNPA1P09651 372 aaKnown RBP eCLIP14.77□□□□□ -0.05
USF1-205ENST00000473969 P4HA1P13674 534 aa14.77□□□□□ -0.05
USF1-205ENST00000473969 CD44P16070 742 aaKnown RBP14.77□□□□□ -0.05
USF1-205ENST00000473969 LHX1P48742 406 aa14.77□□□□□ -0.05
USF1-205ENST00000473969 DLG4P78352 724 aa14.77□□□□□ -0.05
USF1-205ENST00000473969 CLDN10P78369 228 aa14.77□□□□□ -0.05
USF1-205ENST00000473969 TSPY1Q01534 308 aa14.77□□□□□ -0.05
USF1-205ENST00000473969 NCOA4Q13772 614 aa14.77□□□□□ -0.05
USF1-205ENST00000473969 TCERG1LQ5VWI1 586 aa14.77□□□□□ -0.05
USF1-205ENST00000473969 RSPO2Q6UXX9 243 aaPredicted RBP14.77□□□□□ -0.05
USF1-205ENST00000473969 C15orf39Q6ZRI6 1047 aa14.77□□□□□ -0.05
USF1-205ENST00000473969 DCP1BQ8IZD4 617 aaKnown RBP14.77□□□□□ -0.05
USF1-205ENST00000473969 TOP6BLQ8N6T0 577 aa14.77□□□□□ -0.05
USF1-205ENST00000473969 MLKLQ8NB16 471 aa14.77□□□□□ -0.05
USF1-205ENST00000473969 CCDC150Q8NCX0 1101 aa14.77□□□□□ -0.05
USF1-205ENST00000473969 SLC7A14Q8TBB6 771 aa14.77□□□□□ -0.05
USF1-205ENST00000473969 SPATA18Q8TC71 538 aa14.77□□□□□ -0.05
USF1-205ENST00000473969 PLEKHO2Q8TD55 490 aa14.77□□□□□ -0.05
USF1-205ENST00000473969 SMG7Q92540 1137 aaKnown RBP14.77□□□□□ -0.05
USF1-205ENST00000473969 BORCS6Q96GS4 357 aa14.77□□□□□ -0.05
USF1-205ENST00000473969 CEP63Q96MT8 703 aa14.77□□□□□ -0.05
USF1-205ENST00000473969 IMPG2Q9BZV3 1241 aa14.77□□□□□ -0.05
USF1-205ENST00000473969 MMRN2Q9H8L6 949 aa14.77□□□□□ -0.05
USF1-205ENST00000473969 CYP4F11Q9HBI6 524 aa14.77□□□□□ -0.05
USF1-205ENST00000473969 METTL14Q9HCE5 456 aaKnown RBP14.77□□□□□ -0.05
USF1-205ENST00000473969 AFF4Q9UHB7 1163 aaKnown RBP14.77□□□□□ -0.05
USF1-205ENST00000473969 WDR27A2RRH5 827 aa14.76□□□□□ -0.05
USF1-205ENST00000473969 RFPL2O75678 378 aa14.76□□□□□ -0.05
USF1-205ENST00000473969 ABLIM3O94929 683 aa14.76□□□□□ -0.05
USF1-205ENST00000473969 LRG1P02750 347 aa14.76□□□□□ -0.05
USF1-205ENST00000473969 C4BPAP04003 597 aaKnown RBP14.76□□□□□ -0.05
USF1-205ENST00000473969 ATF2P15336 505 aa14.76□□□□□ -0.05
USF1-205ENST00000473969 BMP6P22004 513 aa14.76□□□□□ -0.05
USF1-205ENST00000473969 SSTR3P32745 418 aaPredicted RBP14.76□□□□□ -0.05
USF1-205ENST00000473969 GTF2H1P32780 548 aa14.76□□□□□ -0.05
USF1-205ENST00000473969 PIK3CAP42336 1068 aa14.76□□□□□ -0.05
USF1-205ENST00000473969 PMS1P54277 932 aaKnown RBP14.76□□□□□ -0.05
USF1-205ENST00000473969 STX17P56962 302 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms