RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 JPH1Q9HDC5 661 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-214ENST00000473778 BAIAP2L1Q9UHR4 511 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 AGO2Q9UKV8 859 aaKnown RBP11.6□□□□□ -0.55
C9orf3-214ENST00000473778 ZNF214Q9UL59 606 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-214ENST00000473778 GRID1Q9ULK0 1009 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 ZNRF3Q9ULT6 936 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.6□□□□□ -0.55
C9orf3-214ENST00000473778 IRF6O14896 467 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 PSTPIP1O43586 416 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 BANF1O75531 89 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 CCND2P30279 289 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 RTP1P59025 263 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 BNIP1Q12981 228 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 SNRNP48Q6IEG0 339 aaKnown RBP11.6□□□□□ -0.55
C9orf3-214ENST00000473778 MFSD7Q6UXD7 560 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 USP37Q86T82 979 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 PNMA8AQ86V59 439 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-214ENST00000473778 AGBL3Q8NEM8 1001 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 SPDYE1Q8NFV5 336 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-214ENST00000473778 RDM1Q8NG50 284 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 PRCCQ92733 491 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-214ENST00000473778 ATP6V0A1Q93050 837 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 FNBP1Q96RU3 617 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 TARS2Q9BW92 718 aaKnown RBP11.6□□□□□ -0.55
C9orf3-214ENST00000473778 L3MBTL1Q9Y468 752 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 PCDHB4Q9Y5E5 795 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.6□□□□□ -0.55
C9orf3-214ENST00000473778 STYXL1Q9Y6J8 313 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 CNTNAP2Q9UHC6 1331 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 F8VP50 259 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 LIASO43766 372 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 PEX10O60683 326 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 ZBED4O75132 1171 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 PIAS1O75925 651 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 CST3P01034 146 aaPredicted RBP11.59□□□□□ -0.55
C9orf3-214ENST00000473778 TAC1P20366 129 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 GLRA2P23416 452 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 SSR1P43307 286 aaKnown RBP11.59□□□□□ -0.55
C9orf3-214ENST00000473778 ALDH5A1P51649 535 aaPredicted RBP11.59□□□□□ -0.55
C9orf3-214ENST00000473778 NOP14P78316 857 aaKnown RBP11.59□□□□□ -0.55
C9orf3-214ENST00000473778 SARNPP82979 210 aaKnown RBP11.59□□□□□ -0.55
C9orf3-214ENST00000473778 GAD2Q05329 585 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 NFX1Q12986 1120 aaKnown RBP11.59□□□□□ -0.55
C9orf3-214ENST00000473778 EMC2Q15006 297 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 WDR72Q3MJ13 1102 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 WDR44Q5JSH3 913 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 ZNF365Q70YC5 407 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 SPATA21Q7Z572 469 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 PHF13Q86YI8 300 aaPredicted RBP11.59□□□□□ -0.55
C9orf3-214ENST00000473778 RELL1Q8IUW5 271 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 RTKN2Q8IZC4 609 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 RBBP8NLQ8NC74 664 aaPredicted RBP11.59□□□□□ -0.55
C9orf3-214ENST00000473778 MCPH1Q8NEM0 835 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 THOC1Q96FV9 657 aaKnown RBP11.59□□□□□ -0.55
C9orf3-214ENST00000473778 NSRP1Q9H0G5 558 aaKnown RBP11.59□□□□□ -0.55
C9orf3-214ENST00000473778 ECT2Q9H8V3 914 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 RBAKQ9NYW8 714 aaPredicted RBP11.59□□□□□ -0.55
C9orf3-214ENST00000473778 ANKFY1Q9P2R3 1169 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 SLC9A2Q9UBY0 812 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 FBXO40Q9UH90 709 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 IVNS1ABPQ9Y6Y0 642 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 PHIPQ8WWQ0 1821 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 TCRBV5S1A1TA0A578 114 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 RASA4BC9J798 803 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 RASA4O43374 803 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 CDH16O75309 829 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 SPAG7O75391 227 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 PSAPP07602 524 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 KRT16P08779 473 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 FGFR1P11362 822 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 DPEP1P16444 411 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 MAN1A1P33908 653 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 TNFSF9P41273 254 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 MAGEA4P43358 317 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 TMEM132BQ14DG7 1078 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 TMED2Q15363 201 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 FAM182AQ5T1J6 154 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 ZNF772Q68DY9 489 aaPredicted RBP11.59□□□□□ -0.55
C9orf3-214ENST00000473778 CAPN12Q6ZSI9 719 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 FAM47EQ6ZV65 393 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 ECHDC2Q86YB7 292 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 CCDC89Q8N998 374 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 EXD1Q8NHP7 514 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 MAGEC3Q8TD91 643 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 ZNF606Q8WXB4 792 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 HAUS1Q96CS2 278 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 SLITRK1Q96PX8 696 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 C10orf88Q9H8K7 445 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 CNTN6Q9UQ52 1028 aa11.59□□□□□ -0.55
C9orf3-214ENST00000473778 ADGRA2Q96PE1 1338 aa11.58□□□□□ -0.56
C9orf3-214ENST00000473778 IGF2BP3O00425 579 aaKnown RBP eCLIP11.58□□□□□ -0.56
C9orf3-214ENST00000473778 PECAM1P16284 738 aaPredicted RBP11.58□□□□□ -0.56
C9orf3-214ENST00000473778 PAX7P23759 505 aa11.58□□□□□ -0.56
C9orf3-214ENST00000473778 STX2P32856 288 aa11.58□□□□□ -0.56
C9orf3-214ENST00000473778 IRX1P78414 480 aaPredicted RBP11.58□□□□□ -0.56
C9orf3-214ENST00000473778 CAV1Q03135 178 aa11.58□□□□□ -0.56
C9orf3-214ENST00000473778 ZNF268Q14587 947 aaPredicted RBP11.58□□□□□ -0.56
C9orf3-214ENST00000473778 CCDC142Q17RM4 750 aa11.58□□□□□ -0.56
C9orf3-214ENST00000473778 NBPF12Q5TAG4 269 aaPredicted RBP11.58□□□□□ -0.56
C9orf3-214ENST00000473778 PRAMEF18Q5VWM3 479 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms