RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 MYBPC2Q14324 1141 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 PSMD6Q15008 389 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 SURF1Q15526 300 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 NFKBIBQ15653 356 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 ZBTB6Q15916 424 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 SPATA1Q5VX52 437 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 TTI2Q6NXR4 508 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 NT5DC4Q86YG4 428 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 ZC3H3Q8IXZ2 948 aaKnown RBP9.83□□□□□ -0.84
SMC4-214ENST00000472991 FAM186BQ8IYM0 893 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 MLKLQ8NB16 471 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 C3orf58Q8NDZ4 430 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 BEST2Q8NFU1 509 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 SPPL3Q8TCT6 385 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 PLEKHO2Q8TD55 490 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 EPS8L1Q8TE68 723 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 TMEM174Q8WUU8 243 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 POF1BQ8WVV4 589 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 MYLIPQ8WY64 445 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 CCDC127Q96BQ5 260 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 EEF2KMTQ96G04 330 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 MFSD14AQ96MC6 490 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 UROC1Q96N76 676 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 FNBP1Q96RU3 617 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 TSPAN18Q96SJ8 248 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 GAS2L1Q99501 681 aaPredicted RBP9.83□□□□□ -0.84
SMC4-214ENST00000472991 CDX2Q99626 313 aaPredicted RBP9.83□□□□□ -0.84
SMC4-214ENST00000472991 COLEC11Q9BWP8 271 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 VN1R3Q9BXE9 311 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 MTMR12Q9C0I1 747 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 MTMR10Q9NXD2 777 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 ADAM28Q9UKQ2 775 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 FRMD4BQ9Y2L6 1034 aa9.83□□□□□ -0.84
SMC4-214ENST00000472991 PPEF2O14830 753 aa9.82□□□□□ -0.84
SMC4-214ENST00000472991 MAN1A2O60476 641 aa9.82□□□□□ -0.84
SMC4-214ENST00000472991 AKAP3O75969 853 aa9.82□□□□□ -0.84
SMC4-214ENST00000472991 EPB41P11171 864 aaKnown RBP9.82□□□□□ -0.84
SMC4-214ENST00000472991 TNNI1P19237 187 aa9.82□□□□□ -0.84
SMC4-214ENST00000472991 CYP3A5P20815 502 aa9.82□□□□□ -0.84
SMC4-214ENST00000472991 IGFBP6P24592 240 aaPredicted RBP9.82□□□□□ -0.84
SMC4-214ENST00000472991 DNAJB1P25685 340 aa9.82□□□□□ -0.84
SMC4-214ENST00000472991 LRPAP1P30533 357 aa9.82□□□□□ -0.84
SMC4-214ENST00000472991 PSMC2P35998 433 aaKnown RBP9.82□□□□□ -0.84
SMC4-214ENST00000472991 FKBP3Q00688 224 aaKnown RBP9.82□□□□□ -0.84
SMC4-214ENST00000472991 PLCB3Q01970 1234 aa9.82□□□□□ -0.84
SMC4-214ENST00000472991 KRT17Q04695 432 aa9.82□□□□□ -0.84
SMC4-214ENST00000472991 UBE3AQ05086 875 aa9.82□□□□□ -0.84
SMC4-214ENST00000472991 CAMK1Q14012 370 aa9.82□□□□□ -0.84
SMC4-214ENST00000472991 ADGRE1Q14246 886 aa9.82□□□□□ -0.84
SMC4-214ENST00000472991 UPP1Q16831 310 aa9.82□□□□□ -0.84
SMC4-214ENST00000472991 PPP1R26Q5T8A7 1209 aaPredicted RBP9.82□□□□□ -0.84
SMC4-214ENST00000472991 FUT10Q6P4F1 479 aa9.82□□□□□ -0.84
SMC4-214ENST00000472991 SASS6Q6UVJ0 657 aa9.82□□□□□ -0.84
SMC4-214ENST00000472991 WDR49Q8IV35 697 aa9.82□□□□□ -0.84
SMC4-214ENST00000472991 OR5B17Q8NGF7 314 aa9.82□□□□□ -0.84
SMC4-214ENST00000472991 ANKRD36BP1Q96IX9 119 aa9.82□□□□□ -0.84
SMC4-214ENST00000472991 CGRRF1Q99675 332 aa9.82□□□□□ -0.84
SMC4-214ENST00000472991 DUSP9Q99956 384 aaKnown RBP9.82□□□□□ -0.84
SMC4-214ENST00000472991 MKNK1Q9BUB5 465 aa9.82□□□□□ -0.84
SMC4-214ENST00000472991 GZF1Q9H116 711 aaPredicted RBP9.82□□□□□ -0.84
SMC4-214ENST00000472991 INTS13Q9NVM9 706 aa9.82□□□□□ -0.84
SMC4-214ENST00000472991 DPP3Q9NY33 737 aa9.82□□□□□ -0.84
SMC4-214ENST00000472991 CDV3Q9UKY7 258 aaKnown RBP9.82□□□□□ -0.84
SMC4-214ENST00000472991 GPSM3Q9Y4H4 160 aa9.82□□□□□ -0.84
SMC4-214ENST00000472991 SF3B1O75533 1304 aaKnown RBP eCLIP9.82□□□□□ -0.847e-33■■■■■ 320.9
SMC4-214ENST00000472991 EYSQ5T1H1 3165 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 LRRIQ3A6PVS8 624 aaPredicted RBP9.81□□□□□ -0.84
SMC4-214ENST00000472991 TMEM189-UBE2V1I3L0A0 370 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 I3L4J1 428 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 MAPK13O15264 365 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 TADA2AO75478 443 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 B3GAT3O94766 335 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 TNNC2P02585 160 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 ITGB3P05106 788 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 TRIM49P0CI25 452 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 TRIM49CP0CI26 452 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 KRT13P13646 458 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 IGFBP4P22692 258 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 RPL9P32969 192 aaKnown RBP9.81□□□□□ -0.84
SMC4-214ENST00000472991 IRS1P35568 1242 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 BRCC3P46736 316 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 ERVFC1P60507 584 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 DLG4P78352 724 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 STX1AQ16623 288 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 SKOR2Q2VWA4 1001 aaPredicted RBP9.81□□□□□ -0.84
SMC4-214ENST00000472991 PLPP4Q5VZY2 271 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 C9orf57Q5W0N0 161 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 DCLRE1AQ6PJP8 1040 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 FOXR2Q6PJQ5 311 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 CD300LGQ6UXG3 332 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 C11orf57Q6ZUT1 292 aaPredicted RBP9.81□□□□□ -0.84
SMC4-214ENST00000472991 DDX53Q86TM3 631 aaKnown RBP9.81□□□□□ -0.84
SMC4-214ENST00000472991 RNF168Q8IYW5 571 aaPredicted RBP9.81□□□□□ -0.84
SMC4-214ENST00000472991 VPS52Q8N1B4 723 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 CSGALNACT2Q8N6G5 542 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 C1orf127Q8N9H9 656 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 PARD3BQ8TEW8 1205 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 CACTINQ8WUQ7 758 aaKnown RBP9.81□□□□□ -0.84
SMC4-214ENST00000472991 MED15Q96RN5 788 aa9.81□□□□□ -0.84
SMC4-214ENST00000472991 KCTD15Q96SI1 283 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms