RNA–Protein interactions for RNA: ENST00000472673.5

COMMD3-211, Transcript of COMM domain containing 3, human

TSL 3

Gene COMMD3, Length 237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD3-211	ENST00000472673	TRIB1	Q96RU8	372 aa		4.88	□□□□□ -1.63
COMMD3-211	ENST00000472673	SMO	Q99835	787 aa		4.88	□□□□□ -1.63
COMMD3-211	ENST00000472673	VKORC1	Q9BQB6	163 aa		4.88	□□□□□ -1.63
COMMD3-211	ENST00000472673	TCF7L1	Q9HCS4	588 aa		4.88	□□□□□ -1.63
COMMD3-211	ENST00000472673	LMBRD1	Q9NUN5	540 aa		4.88	□□□□□ -1.63
COMMD3-211	ENST00000472673	CFAP97	Q9P2B7	532 aa		4.88	□□□□□ -1.63
COMMD3-211	ENST00000472673	LRIT1	Q9P2V4	623 aa		4.88	□□□□□ -1.63
COMMD3-211	ENST00000472673	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.88	□□□□□ -1.63
COMMD3-211	ENST00000472673	ANKRD6	Q9Y2G4	727 aa		4.88	□□□□□ -1.63
COMMD3-211	ENST00000472673	NEU2	Q9Y3R4	380 aa		4.88	□□□□□ -1.63
COMMD3-211	ENST00000472673	SALL3	Q9BXA9	1300 aa		4.88	□□□□□ -1.63
COMMD3-211	ENST00000472673	POLRMT	O00411	1230 aa	Known RBP	4.87	□□□□□ -1.63
COMMD3-211	ENST00000472673	AKAP5	P24588	427 aa		4.87	□□□□□ -1.63
COMMD3-211	ENST00000472673	ZNF135	P52742	658 aa	Predicted RBP	4.87	□□□□□ -1.63
COMMD3-211	ENST00000472673	POU6F2	P78424	691 aa	Predicted RBP	4.87	□□□□□ -1.63
COMMD3-211	ENST00000472673	MRPS35	P82673	323 aa	Known RBP	4.87	□□□□□ -1.63
COMMD3-211	ENST00000472673	DYRK1A	Q13627	763 aa		4.87	□□□□□ -1.63
COMMD3-211	ENST00000472673	TTF1	Q15361	905 aa	Predicted RBP	4.87	□□□□□ -1.63
COMMD3-211	ENST00000472673	PRR16	Q569H4	304 aa		4.87	□□□□□ -1.63
COMMD3-211	ENST00000472673	SLC30A10	Q6XR72	485 aa		4.87	□□□□□ -1.63
COMMD3-211	ENST00000472673	ACTRT2	Q8TDY3	377 aa		4.87	□□□□□ -1.63
COMMD3-211	ENST00000472673	SNX19	Q92543	992 aa		4.87	□□□□□ -1.63
COMMD3-211	ENST00000472673	TNPO1	Q92973	898 aa	Known RBP	4.87	□□□□□ -1.63
COMMD3-211	ENST00000472673	MVB12A	Q96EY5	273 aa		4.87	□□□□□ -1.63
COMMD3-211	ENST00000472673	LRIG1	Q96JA1	1093 aa		4.87	□□□□□ -1.63
COMMD3-211	ENST00000472673	NUP88	Q99567	741 aa	Predicted RBP	4.87	□□□□□ -1.63
COMMD3-211	ENST00000472673	WDCP	Q9H6R7	721 aa		4.87	□□□□□ -1.63
COMMD3-211	ENST00000472673	KMT5A	Q9NQR1	393 aa		4.87	□□□□□ -1.63
COMMD3-211	ENST00000472673	INTS13	Q9NVM9	706 aa		4.87	□□□□□ -1.63
COMMD3-211	ENST00000472673	RLIM	Q9NVW2	624 aa		4.87	□□□□□ -1.63
COMMD3-211	ENST00000472673	LOC105371045	A0A1W2PR82	267 aa		4.86	□□□□□ -1.63
COMMD3-211	ENST00000472673	PEX1	O43933	1283 aa		4.86	□□□□□ -1.63
COMMD3-211	ENST00000472673	ABLIM3	O94929	683 aa		4.86	□□□□□ -1.63
COMMD3-211	ENST00000472673	TYR	P14679	529 aa		4.86	□□□□□ -1.63
COMMD3-211	ENST00000472673	GATA3	P23771	443 aa		4.86	□□□□□ -1.63
COMMD3-211	ENST00000472673	CLK3	P49761	638 aa	Known RBP	4.86	□□□□□ -1.63
COMMD3-211	ENST00000472673	MCL1	Q07820	350 aa		4.86	□□□□□ -1.63
COMMD3-211	ENST00000472673	KIF22	Q14807	665 aa		4.86	□□□□□ -1.63
COMMD3-211	ENST00000472673	ZNF169	Q14929	603 aa	Predicted RBP	4.86	□□□□□ -1.63
COMMD3-211	ENST00000472673	FAM90A1	Q86YD7	464 aa		4.86	□□□□□ -1.63
COMMD3-211	ENST00000472673	GRAMD1C	Q8IYS0	662 aa		4.86	□□□□□ -1.63
COMMD3-211	ENST00000472673	ADGRG5	Q8IZF4	528 aa		4.86	□□□□□ -1.63
COMMD3-211	ENST00000472673	SLC30A5	Q8TAD4	765 aa		4.86	□□□□□ -1.63
COMMD3-211	ENST00000472673	FBXO41	Q8TF61	875 aa		4.86	□□□□□ -1.63
COMMD3-211	ENST00000472673	MAP3K14	Q99558	947 aa		4.86	□□□□□ -1.63
COMMD3-211	ENST00000472673	PNPO	Q9NVS9	261 aa		4.86	□□□□□ -1.63
COMMD3-211	ENST00000472673	PRSS29P	A6NIE9	313 aa		4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673		H3BUI4	141 aa		4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	YY2	O15391	372 aa		4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	MATN4	O95460	622 aa		4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	AHSG	P02765	367 aa		4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	SRGN	P10124	158 aa		4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	RARB	P10826	455 aa		4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	SIM1	P81133	766 aa	Predicted RBP	4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	PIN1	Q13526	163 aa	Predicted RBP	4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	IFIT1B	Q5T764	474 aa	Known RBP	4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	VWA1	Q6PCB0	445 aa		4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	TSHZ1	Q6ZSZ6	1077 aa		4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	MICALCL	Q6ZW33	695 aa		4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	SIMC1	Q8NDZ2	872 aa		4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	TOR1AIP2	Q8NFQ8	470 aa		4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	CAGE1	Q8TC20	777 aa		4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	LPIN2	Q92539	896 aa		4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	HPS3	Q969F9	1004 aa		4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	FBXL20	Q96IG2	436 aa		4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	FAM167A	Q96KS9	214 aa		4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	RHOBTB2	Q9BYZ6	727 aa		4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	MRPL46	Q9H2W6	279 aa	Known RBP	4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	GPR35	Q9HC97	309 aa		4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	KIAA1586	Q9HCI6	787 aa		4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	MRPS18A	Q9NVS2	196 aa	Known RBP	4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	ETAA1	Q9NY74	926 aa		4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	ZNF180	Q9UJW8	692 aa		4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	AGAP1	Q9UPQ3	857 aa		4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	INSL6	Q9Y581	213 aa		4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	PCDHA1	Q9Y5I3	950 aa		4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	NR2E3	Q9Y5X4	410 aa		4.85	□□□□□ -1.63
COMMD3-211	ENST00000472673	SHROOM4	Q9ULL8	1493 aa		4.84	□□□□□ -1.63
COMMD3-211	ENST00000472673		E7ENX8	843 aa		4.84	□□□□□ -1.63
COMMD3-211	ENST00000472673	AKAP10	O43572	662 aa		4.84	□□□□□ -1.63
COMMD3-211	ENST00000472673	VPS4B	O75351	444 aa		4.84	□□□□□ -1.63
COMMD3-211	ENST00000472673	OFD1	O75665	1012 aa		4.84	□□□□□ -1.63
COMMD3-211	ENST00000472673	KIF20A	O95235	890 aa		4.84	□□□□□ -1.63
COMMD3-211	ENST00000472673	CHEK2	O96017	543 aa		4.84	□□□□□ -1.63
COMMD3-211	ENST00000472673	GNAI2	P04899	355 aa		4.84	□□□□□ -1.63
COMMD3-211	ENST00000472673	PPP3CB	P16298	524 aa		4.84	□□□□□ -1.63
COMMD3-211	ENST00000472673	LPO	P22079	712 aa	Predicted RBP	4.84	□□□□□ -1.63
COMMD3-211	ENST00000472673	FOLR3	P41439	243 aa		4.84	□□□□□ -1.63
COMMD3-211	ENST00000472673	NPTX2	P47972	431 aa		4.84	□□□□□ -1.63
COMMD3-211	ENST00000472673	PTH2R	P49190	550 aa		4.84	□□□□□ -1.63
COMMD3-211	ENST00000472673	RAB27A	P51159	221 aa		4.84	□□□□□ -1.63
COMMD3-211	ENST00000472673	TAP2	Q03519	686 aa		4.84	□□□□□ -1.63
COMMD3-211	ENST00000472673	HABP2	Q14520	560 aa	Predicted RBP	4.84	□□□□□ -1.63
COMMD3-211	ENST00000472673	ZNF267	Q14586	743 aa	Predicted RBP	4.84	□□□□□ -1.63
COMMD3-211	ENST00000472673	HLX	Q14774	488 aa	Predicted RBP	4.84	□□□□□ -1.63
COMMD3-211	ENST00000472673	ATAT1	Q5SQI0	421 aa		4.84	□□□□□ -1.63
COMMD3-211	ENST00000472673	PPP1R3B	Q86XI6	285 aa		4.84	□□□□□ -1.63
COMMD3-211	ENST00000472673	ADGRG3	Q86Y34	549 aa		4.84	□□□□□ -1.63
COMMD3-211	ENST00000472673	B3GALNT2	Q8NCR0	500 aa		4.84	□□□□□ -1.63
COMMD3-211	ENST00000472673	DUSP26	Q9BV47	211 aa		4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms