RNA–Protein interactions for RNA: ENST00000472305.1

SEC16A-209, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, human

TSL 3

Gene SEC16A, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC16A-209	ENST00000472305	NME7	Q9Y5B8	376 aa		13.82	□□□□□ -0.2
SEC16A-209	ENST00000472305	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
SEC16A-209	ENST00000472305	NLRC5	Q86WI3	1866 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	LRRC10B	A6NIK2	292 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	HIDE1	A8MVS5	230 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	PMM2	O15305	246 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	TEX33	O43247	280 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	LILRB3	O75022	631 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	CLSTN1	O94985	981 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	STAU1	O95793	577 aa	Known RBP	13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	CTSA	P10619	480 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	RPL17	P18621	184 aa	Known RBP	13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	SLC9A1	P19634	815 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	ATIC	P31939	592 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	PNPLA4	P41247	253 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	KLK7	P49862	253 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	CDH8	P55286	799 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	MYO1E	Q12965	1108 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	PTPN14	Q15678	1187 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	SOWAHA	Q2M3V2	549 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	SGSM1	Q2NKQ1	1148 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	USP41	Q3LFD5	358 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	WDR72	Q3MJ13	1102 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	DPY19L2P1	Q6NXN4	242 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	SCARA5	Q6ZMJ2	495 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	TMC7	Q7Z402	723 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	ADGRD2	Q7Z7M1	963 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	LNX1	Q8TBB1	728 aa	Predicted RBP	13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	RIN2	Q8WYP3	895 aa	Predicted RBP	13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	TCF25	Q9BQ70	676 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	MRPL45	Q9BRJ2	306 aa	Known RBP	13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	TTPAL	Q9BTX7	342 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	SMYD3	Q9H7B4	428 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	VRTN	Q9H8Y1	702 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	TLR9	Q9NR96	1032 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	PUF60	Q9UHX1	559 aa	Known RBP	13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	LZTS1	Q9Y250	596 aa		13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.81	□□□□□ -0.2
SEC16A-209	ENST00000472305	CHD7	Q9P2D1	2997 aa		13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	PLXNA4	Q9HCM2	1894 aa		13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	GOLGA6L19	H0YKK7	550 aa		13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	PES1	O00541	588 aa	Known RBP	13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	P4HA2	O15460	535 aa		13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	ADAM12	O43184	909 aa		13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	N4BP1	O75113	896 aa	Known RBP	13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	CXCL14	O95715	111 aa		13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	CA8	P35219	290 aa		13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	ASPA	P45381	313 aa		13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	GLUD2	P49448	558 aa		13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	NOP14	P78316	857 aa	Known RBP	13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	FANCC	Q00597	558 aa		13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	DSG1	Q02413	1049 aa		13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	UBE3A	Q05086	875 aa		13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	MRPL58	Q14197	206 aa	Known RBP	13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	ZNF667	Q5HYK9	610 aa		13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	VARS2	Q5ST30	1063 aa	Known RBP	13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	GJB7	Q6PEY0	223 aa		13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	LIMS2	Q7Z4I7	341 aa		13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	ARHGEF19	Q8IW93	802 aa		13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	PDCL2	Q8N4E4	241 aa		13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	MICAL1	Q8TDZ2	1067 aa		13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	KBTBD7	Q8WVZ9	684 aa		13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	KAT5	Q92993	513 aa		13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	TMEM209	Q96SK2	561 aa		13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	RTP3	Q9BQQ7	232 aa		13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	INTS2	Q9H0H0	1204 aa	Known RBP	13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	ENTPD7	Q9NQZ7	604 aa		13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	GDAP2	Q9NXN4	497 aa		13.8	□□□□□ -0.2
SEC16A-209	ENST00000472305	MYO7A	Q13402	2215 aa		13.79	□□□□□ -0.2
SEC16A-209	ENST00000472305	CARNS1	A5YM72	827 aa		13.79	□□□□□ -0.2
SEC16A-209	ENST00000472305	C2orf71	A6NGG8	1288 aa		13.79	□□□□□ -0.2
SEC16A-209	ENST00000472305	SYN3	O14994	580 aa		13.79	□□□□□ -0.2
SEC16A-209	ENST00000472305	AP5Z1	O43299	807 aa		13.79	□□□□□ -0.2
SEC16A-209	ENST00000472305	TRAPPC3	O43617	180 aa		13.79	□□□□□ -0.2
SEC16A-209	ENST00000472305	WEE2	P0C1S8	567 aa		13.79	□□□□□ -0.2
SEC16A-209	ENST00000472305	TYMP	P19971	482 aa		13.79	□□□□□ -0.2
SEC16A-209	ENST00000472305	CDR1	P51861	262 aa		13.79	□□□□□ -0.2
SEC16A-209	ENST00000472305	ELAVL2	Q12926	359 aa	Known RBP	13.79	□□□□□ -0.2
SEC16A-209	ENST00000472305	TJAP1	Q5JTD0	557 aa		13.79	□□□□□ -0.2
SEC16A-209	ENST00000472305	PHLDB3	Q6NSJ2	640 aa		13.79	□□□□□ -0.2
SEC16A-209	ENST00000472305	GBP6	Q6ZN66	633 aa		13.79	□□□□□ -0.2
SEC16A-209	ENST00000472305	GLYCTK	Q8IVS8	523 aa		13.79	□□□□□ -0.2
SEC16A-209	ENST00000472305	TOP6BL	Q8N6T0	577 aa		13.79	□□□□□ -0.2
SEC16A-209	ENST00000472305	MYLIP	Q8WY64	445 aa		13.79	□□□□□ -0.2
SEC16A-209	ENST00000472305	TAF4B	Q92750	862 aa		13.79	□□□□□ -0.2
SEC16A-209	ENST00000472305	MMS19	Q96T76	1030 aa		13.79	□□□□□ -0.2
SEC16A-209	ENST00000472305	ARID3A	Q99856	593 aa		13.79	□□□□□ -0.2
SEC16A-209	ENST00000472305	LPIN3	Q9BQK8	851 aa		13.79	□□□□□ -0.2
SEC16A-209	ENST00000472305	SIX2	Q9NPC8	291 aa		13.79	□□□□□ -0.2
SEC16A-209	ENST00000472305	GCNT4	Q9P109	453 aa		13.79	□□□□□ -0.2
SEC16A-209	ENST00000472305	AJAP1	Q9UKB5	411 aa	Predicted RBP	13.79	□□□□□ -0.2
SEC16A-209	ENST00000472305	MTCH2	Q9Y6C9	303 aa		13.79	□□□□□ -0.2
SEC16A-209	ENST00000472305	MYO9B	Q13459	2157 aa		13.78	□□□□□ -0.2
SEC16A-209	ENST00000472305	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.78	□□□□□ -0.2
SEC16A-209	ENST00000472305	LGALS16	A8MUM7	142 aa		13.78	□□□□□ -0.2
SEC16A-209	ENST00000472305	PER2	O15055	1255 aa		13.78	□□□□□ -0.2
SEC16A-209	ENST00000472305	TBC1D4	O60343	1298 aa		13.78	□□□□□ -0.2
SEC16A-209	ENST00000472305	HUS1	O60921	280 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms