RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 ZBTB33Q86T24 672 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 PPFIBP1Q86W92 1011 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 CEP120Q8N960 986 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 KREMEN2Q8NCW0 462 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 PRSS33Q8NF86 280 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 CCDC47Q96A33 483 aaKnown RBP9.95□□□□□ -0.82
SMC4-213ENST00000472282 PBXIP1Q96AQ6 731 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 ITPKCQ96DU7 683 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 ZBTB45Q96K62 511 aaPredicted RBP9.95□□□□□ -0.82
SMC4-213ENST00000472282 RIPOR3Q96MK2 946 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 NECTIN4Q96NY8 510 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 COLEC11Q9BWP8 271 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 STRA6Q9BX79 667 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 EMILIN2Q9BXX0 1053 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 CDT1Q9H211 546 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 IKZF4Q9H2S9 585 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 ZFAND3Q9H8U3 227 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 SFXN1Q9H9B4 322 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 RXFP1Q9HBX9 757 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 MAN1C1Q9NR34 630 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 LIMD1Q9UGP4 676 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 HOOK1Q9UJC3 728 aaKnown RBP9.95□□□□□ -0.82
SMC4-213ENST00000472282 GDAQ9Y2T3 454 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 ZMYM2Q9UBW7 1377 aa9.95□□□□□ -0.82
SMC4-213ENST00000472282 COL4A3Q01955 1670 aa9.94□□□□□ -0.82
SMC4-213ENST00000472282 UBE4BO95155 1302 aa9.94□□□□□ -0.82
SMC4-213ENST00000472282 TISP43B9A030 160 aa9.94□□□□□ -0.82
SMC4-213ENST00000472282 EIF3DO15371 548 aaKnown RBP eCLIP9.94□□□□□ -0.822e-16■■■■■ 56.2
SMC4-213ENST00000472282 MEFVO15553 781 aaPredicted RBP9.94□□□□□ -0.82
SMC4-213ENST00000472282 N4BP1O75113 896 aaKnown RBP9.94□□□□□ -0.82
SMC4-213ENST00000472282 TOM1L1O75674 476 aa9.94□□□□□ -0.82
SMC4-213ENST00000472282 RFPL2O75678 378 aa9.94□□□□□ -0.82
SMC4-213ENST00000472282 KIF4AO95239 1232 aa9.94□□□□□ -0.82
SMC4-213ENST00000472282 PROZP22891 400 aa9.94□□□□□ -0.82
SMC4-213ENST00000472282 MATR3P43243 847 aaKnown RBP eCLIP9.94□□□□□ -0.827e-8■■□□□ 11.8
SMC4-213ENST00000472282 TUSC3Q13454 348 aa9.94□□□□□ -0.82
SMC4-213ENST00000472282 HSP90AA2PQ14568 343 aaPredicted RBP9.94□□□□□ -0.82
SMC4-213ENST00000472282 NOLC1Q14978 699 aaKnown RBP eCLIP9.94□□□□□ -0.824e-16■■■■■ 30.2
SMC4-213ENST00000472282 SLC39A4Q6P5W5 647 aa9.94□□□□□ -0.82
SMC4-213ENST00000472282 MPZL3Q6UWV2 235 aa9.94□□□□□ -0.82
SMC4-213ENST00000472282 CD300LGQ6UXG3 332 aa9.94□□□□□ -0.82
SMC4-213ENST00000472282 EPM2AIP1Q7L775 607 aaPredicted RBP9.94□□□□□ -0.82
SMC4-213ENST00000472282 PALB2Q86YC2 1186 aa9.94□□□□□ -0.82
SMC4-213ENST00000472282 HACE1Q8IYU2 909 aa9.94□□□□□ -0.82
SMC4-213ENST00000472282 KIAA0895Q8NCT3 520 aa9.94□□□□□ -0.82
SMC4-213ENST00000472282 RIN2Q8WYP3 895 aaPredicted RBP9.94□□□□□ -0.82
SMC4-213ENST00000472282 ACCSQ96QU6 501 aa9.94□□□□□ -0.82
SMC4-213ENST00000472282 TCHPQ9BT92 498 aa9.94□□□□□ -0.82
SMC4-213ENST00000472282 HAPLN2Q9GZV7 340 aa9.94□□□□□ -0.82
SMC4-213ENST00000472282 PTPRHQ9HD43 1115 aa9.94□□□□□ -0.82
SMC4-213ENST00000472282 ADAM28Q9UKQ2 775 aa9.94□□□□□ -0.82
SMC4-213ENST00000472282 NR2E1Q9Y466 385 aa9.94□□□□□ -0.82
SMC4-213ENST00000472282 MAP4K5Q9Y4K4 846 aa9.94□□□□□ -0.82
SMC4-213ENST00000472282 ANKRD63C9JTQ0 380 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 ADAM12O43184 909 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 TGM5O43548 720 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 RHOBTB3O94955 611 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 SMC2O95347 1197 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 GLUD1P00367 558 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 ADH1AP07327 375 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 MCF2P10911 925 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 BMP2P12643 396 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 GRM5P41594 1212 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 NHLH1Q02575 133 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 SOX4Q06945 474 aaPredicted RBP9.93□□□□□ -0.82
SMC4-213ENST00000472282 STK4Q13043 487 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 PSMD2Q13200 908 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 KCNB1Q14721 858 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 CAMK4Q16566 473 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 C6orf118Q5T5N4 469 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 LILRA6Q6PI73 481 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 APBB1IPQ7Z5R6 666 aaPredicted RBP9.93□□□□□ -0.82
SMC4-213ENST00000472282 NELFCDQ8IXH7 590 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 ELOA2Q8IYF1 753 aaPredicted RBP9.93□□□□□ -0.82
SMC4-213ENST00000472282 ZDHHC14Q8IZN3 488 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 SYCP3Q8IZU3 236 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 TMEM130Q8N3G9 435 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 FBXL6Q8N531 539 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 TDRD5Q8NAT2 981 aaKnown RBP9.93□□□□□ -0.82
SMC4-213ENST00000472282 GPT2Q8TD30 523 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 SCFD1Q8WVM8 642 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 SMARCE1Q969G3 411 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 ZNF707Q96C28 371 aaPredicted RBP9.93□□□□□ -0.82
SMC4-213ENST00000472282 MFSD14AQ96MC6 490 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 GOLGA2P5Q9HBQ8 144 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 EXOC7Q9UPT5 735 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 SORCS3Q9UPU3 1222 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 PCDHA5Q9Y5H7 936 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 TSC2P49815 1807 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 MUC6Q6W4X9 2439 aa9.93□□□□□ -0.82
SMC4-213ENST00000472282 SCN1AP35498 2009 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 CCDC195A0A1B0GUA6 201 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 CLDN3O15551 220 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 TADA2AO75478 443 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 THP07101 528 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 MCM4P33991 863 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 HOXD13P35453 343 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 OSTNP61366 133 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 MCL1Q07820 350 aa9.92□□□□□ -0.82
SMC4-213ENST00000472282 QPCTQ16769 361 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms