RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 PLEKHA5Q9HAU0 1116 aa10.23□□□□□ -0.77
GGPS1-204ENST00000471812 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.23□□□□□ -0.77
GGPS1-204ENST00000471812 DNMT3BQ9UBC3 853 aaKnown RBP10.23□□□□□ -0.77
GGPS1-204ENST00000471812 SIX4Q9UIU6 781 aa10.23□□□□□ -0.77
GGPS1-204ENST00000471812 RABGEF1Q9UJ41 708 aa10.23□□□□□ -0.77
GGPS1-204ENST00000471812 UBQLN1Q9UMX0 589 aaKnown RBP10.23□□□□□ -0.77
GGPS1-204ENST00000471812 NUB1Q9Y5A7 615 aa10.23□□□□□ -0.77
GGPS1-204ENST00000471812 CLUHO75153 1309 aa10.23□□□□□ -0.77
GGPS1-204ENST00000471812 DENND4CQ5VZ89 1909 aa10.23□□□□□ -0.77
GGPS1-204ENST00000471812 CACNA1HO95180 2353 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 FSD2A1L4K1 749 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 M0QZQ0 153 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 ABLIM3O94929 683 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 NDUFV2P19404 249 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 RPL9P32969 192 aaKnown RBP10.22□□□□□ -0.77
GGPS1-204ENST00000471812 CCR2P41597 374 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 LILRA4P59901 499 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 STK4Q13043 487 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 PTPN21Q16825 1174 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 KMT5BQ4FZB7 885 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 CTXN3Q4LDR2 81 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 SWT1Q5T5J6 900 aaKnown RBP10.22□□□□□ -0.77
GGPS1-204ENST00000471812 SLC8B1Q6J4K2 584 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 CNNM4Q6P4Q7 775 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 RNF19BQ6ZMZ0 732 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 UNC13DQ70J99 1090 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 OSTM1Q86WC4 334 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 CCDC65Q8IXS2 484 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 GPR65Q8IYL9 337 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 SYCP3Q8IZU3 236 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 C1orf127Q8N9H9 656 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 FSIP1Q8NA03 581 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 IQUBQ8NA54 791 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 TDRD5Q8NAT2 981 aaKnown RBP10.22□□□□□ -0.77
GGPS1-204ENST00000471812 STKLD1Q8NE28 680 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 ZNF507Q8TCN5 953 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 ASIC4Q96FT7 647 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 POP1Q99575 1024 aaKnown RBP10.22□□□□□ -0.77
GGPS1-204ENST00000471812 WDR6Q9NNW5 1121 aaKnown RBP10.22□□□□□ -0.77
GGPS1-204ENST00000471812 DPP3Q9NY33 737 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 SSX2IPQ9Y2D8 614 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 NME7Q9Y5B8 376 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 BACE2Q9Y5Z0 518 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 PTPRDP23468 1912 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 NCANO14594 1321 aa10.22□□□□□ -0.77
GGPS1-204ENST00000471812 FAM237AA0A1B0GTK4 181 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 SYN3O14994 580 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 GJA1P17302 382 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 CYP3A5P20815 502 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 CMA1P23946 247 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 POLR2BP30876 1174 aaKnown RBP10.21□□□□□ -0.77
GGPS1-204ENST00000471812 CASP4P49662 377 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 CYP2J2P51589 502 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 VCPP55072 806 aaKnown RBP10.21□□□□□ -0.77
GGPS1-204ENST00000471812 KRT85P78386 507 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 TFAMQ00059 246 aaKnown RBP10.21□□□□□ -0.77
GGPS1-204ENST00000471812 ELAVL2Q12926 359 aaKnown RBP10.21□□□□□ -0.77
GGPS1-204ENST00000471812 TUSC1Q2TAM9 212 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 PPM1LQ5SGD2 360 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 WSCD1Q658N2 575 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 ARMCX5Q6P1M9 558 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 C15orf39Q6ZRI6 1047 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 TRIM67Q6ZTA4 783 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 CCDC149Q6ZUS6 474 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 ANKS3Q6ZW76 656 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 LRRTM3Q86VH5 581 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 RDH13Q8NBN7 331 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 EDAQ92838 391 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 NECTIN4Q96NY8 510 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 LPIN3Q9BQK8 851 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 MTMR12Q9C0I1 747 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 CUEDC2Q9H467 287 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 PLEKHA4Q9H4M7 779 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 AGPAT3Q9NRZ7 376 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 TMLHEQ9NVH6 421 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 FAM13BQ9NYF5 915 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 RBAKQ9NYW8 714 aaPredicted RBP10.21□□□□□ -0.77
GGPS1-204ENST00000471812 HSPBP1Q9NZL4 362 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 CEP72Q9P209 647 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 KCNG1Q9UIX4 513 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 CFAP45Q9UL16 551 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 POLIQ9UNA4 740 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 VPS9D1Q9Y2B5 631 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 SLC27A5Q9Y2P5 690 aa10.21□□□□□ -0.77
GGPS1-204ENST00000471812 GREB1Q4ZG55 1949 aa10.21□□□□□ -0.78
GGPS1-204ENST00000471812 TMEM221A6NGB7 291 aa10.2□□□□□ -0.78
GGPS1-204ENST00000471812 M0R296 226 aa10.2□□□□□ -0.78
GGPS1-204ENST00000471812 EXTL3O43909 919 aa10.2□□□□□ -0.78
GGPS1-204ENST00000471812 MOSPD3O75425 235 aa10.2□□□□□ -0.78
GGPS1-204ENST00000471812 ITGB3P05106 788 aa10.2□□□□□ -0.78
GGPS1-204ENST00000471812 SLFN14P0C7P3 912 aa10.2□□□□□ -0.78
GGPS1-204ENST00000471812 CEBPBP17676 345 aa10.2□□□□□ -0.78
GGPS1-204ENST00000471812 GARTP22102 1010 aa10.2□□□□□ -0.78
GGPS1-204ENST00000471812 GBP2P32456 591 aaPredicted RBP10.2□□□□□ -0.78
GGPS1-204ENST00000471812 ADCY1Q08828 1119 aa10.2□□□□□ -0.78
GGPS1-204ENST00000471812 ATL3Q6DD88 541 aa10.2□□□□□ -0.78
GGPS1-204ENST00000471812 SLFN12LQ6IEE8 588 aa10.2□□□□□ -0.78
GGPS1-204ENST00000471812 PARM1Q6UWI2 310 aa10.2□□□□□ -0.78
GGPS1-204ENST00000471812 DSTYKQ6XUX3 929 aa10.2□□□□□ -0.78
GGPS1-204ENST00000471812 SMYD4Q8IYR2 804 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms