RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 TJP3O95049 919 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 CST3P01034 146 aaPredicted RBP11.27□□□□□ -0.6
APLF-204ENST00000471727 EDN1P05305 212 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 HARSP12081 509 aaKnown RBP11.27□□□□□ -0.6
APLF-204ENST00000471727 MMP13P45452 471 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 KCNJ1P48048 391 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 MKRN4PQ13434 485 aaPredicted RBP11.27□□□□□ -0.6
APLF-204ENST00000471727 ZNF699Q32M78 642 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 ZNF568Q3ZCX4 644 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 ATF7IP2Q5U623 682 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 TTC19Q6DKK2 380 aaPredicted RBP11.27□□□□□ -0.6
APLF-204ENST00000471727 DNAJC24Q6P3W2 148 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 RHBDF2Q6PJF5 856 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 MMS22LQ6ZRQ5 1243 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 IFNLR1Q8IU57 520 aaPredicted RBP11.27□□□□□ -0.6
APLF-204ENST00000471727 CCDC50Q8IVM0 306 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 TTC39CQ8N584 583 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 NIPA2Q8N8Q9 360 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 NLGN2Q8NFZ4 835 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 IPO4Q8TEX9 1081 aaKnown RBP11.27□□□□□ -0.6
APLF-204ENST00000471727 C1orf54Q8WWF1 131 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 OTUD5Q96G74 571 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 SERPINB12Q96P63 405 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 LHX5Q9H2C1 402 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 SEMA4AQ9H3S1 761 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 RPF1Q9H9Y2 349 aaKnown RBP11.27□□□□□ -0.6
APLF-204ENST00000471727 CISHQ9NSE2 258 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 RBPJLQ9UBG7 517 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 ANAPC5Q9UJX4 755 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 DRG1Q9Y295 367 aaKnown RBP11.27□□□□□ -0.6
APLF-204ENST00000471727 EFR3BQ9Y2G0 817 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 C5orf60A6NFR6 353 aa11.27□□□□□ -0.61
APLF-204ENST00000471727 ZBTB42B2RXF5 422 aa11.27□□□□□ -0.61
APLF-204ENST00000471727 DDNO94850 711 aaPredicted RBP11.27□□□□□ -0.61
APLF-204ENST00000471727 IVDP26440 423 aa11.27□□□□□ -0.61
APLF-204ENST00000471727 ATICP31939 592 aa11.27□□□□□ -0.61
APLF-204ENST00000471727 TNFSF9P41273 254 aa11.27□□□□□ -0.61
APLF-204ENST00000471727 MYL6P60660 151 aa11.27□□□□□ -0.61
APLF-204ENST00000471727 NFX1Q12986 1120 aaKnown RBP11.27□□□□□ -0.61
APLF-204ENST00000471727 DRP2Q13474 957 aa11.27□□□□□ -0.61
APLF-204ENST00000471727 LAMC2Q13753 1193 aa11.27□□□□□ -0.61
APLF-204ENST00000471727 HSDL1Q3SXM5 330 aa11.27□□□□□ -0.61
APLF-204ENST00000471727 TNFAIP8L3Q5GJ75 292 aa11.27□□□□□ -0.61
APLF-204ENST00000471727 DCUN1D2Q6PH85 259 aa11.27□□□□□ -0.61
APLF-204ENST00000471727 USP50Q70EL3 339 aaPredicted RBP11.27□□□□□ -0.61
APLF-204ENST00000471727 ZBTB33Q86T24 672 aa11.27□□□□□ -0.61
APLF-204ENST00000471727 ERICH1Q86X53 443 aa11.27□□□□□ -0.61
APLF-204ENST00000471727 CPNE8Q86YQ8 564 aa11.27□□□□□ -0.61
APLF-204ENST00000471727 CCDC77Q9BR77 488 aa11.27□□□□□ -0.61
APLF-204ENST00000471727 MTMR12Q9C0I1 747 aa11.27□□□□□ -0.61
APLF-204ENST00000471727 ASB7Q9H672 318 aa11.27□□□□□ -0.61
APLF-204ENST00000471727 ERAP1Q9NZ08 941 aa11.27□□□□□ -0.61
APLF-204ENST00000471727 PNMA3Q9UL41 463 aa11.27□□□□□ -0.61
APLF-204ENST00000471727 TCRBV5S1A1TA0A578 114 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 FAM170AA1A519 330 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 ADM5C9JUS6 153 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 MEFVO15553 781 aaPredicted RBP11.26□□□□□ -0.61
APLF-204ENST00000471727 ARIH2O95376 493 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 HOXC6P09630 235 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 TXNP10599 105 aaKnown RBP11.26□□□□□ -0.61
APLF-204ENST00000471727 MCF2P10911 925 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 RALAP11233 206 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 P4HA1P13674 534 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 RDXP35241 583 aaKnown RBP11.26□□□□□ -0.61
APLF-204ENST00000471727 ADCY8P40145 1251 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 PHKA2P46019 1235 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 GSCP56915 257 aaPredicted RBP11.26□□□□□ -0.61
APLF-204ENST00000471727 CCNA1P78396 465 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 SLC20A2Q08357 652 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 ACAP1Q15027 740 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 TMEM132AQ24JP5 1023 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 ERMARDQ5T6L9 678 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 EFCAB12Q6NXP0 572 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 EEPD1Q7L9B9 569 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 POLNQ7Z5Q5 900 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 NT5DC4Q86YG4 428 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 RHPN2Q8IUC4 686 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 PASD1Q8IV76 773 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 FNIP1Q8TF40 1166 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 P3H4Q92791 437 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 ELMO3Q96BJ8 720 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 FGD4Q96M96 766 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 TRIM7Q9C029 511 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 MIS12Q9H081 205 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 VRTNQ9H8Y1 702 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 CYP3A43Q9HB55 503 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 PPANQ9NQ55 473 aaKnown RBP11.26□□□□□ -0.61
APLF-204ENST00000471727 CHST7Q9NS84 486 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 NEU2Q9Y3R4 380 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 DICER1Q9UPY3 1922 aaKnown RBP11.26□□□□□ -0.61
APLF-204ENST00000471727 COL1A2P08123 1366 aa11.26□□□□□ -0.61
APLF-204ENST00000471727 INO80B-WBP1J3KQ70 363 aa11.25□□□□□ -0.61
APLF-204ENST00000471727 TTC4O95801 387 aa11.25□□□□□ -0.61
APLF-204ENST00000471727 CPP00450 1065 aa11.25□□□□□ -0.61
APLF-204ENST00000471727 CALCAP01258 141 aa11.25□□□□□ -0.61
APLF-204ENST00000471727 SHBGP04278 402 aa11.25□□□□□ -0.61
APLF-204ENST00000471727 WEE2P0C1S8 567 aa11.25□□□□□ -0.61
APLF-204ENST00000471727 MARK3P27448 753 aa11.25□□□□□ -0.61
APLF-204ENST00000471727 TMOD1P28289 359 aa11.25□□□□□ -0.61
APLF-204ENST00000471727 SSR1P43307 286 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms