RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 TMEM125Q96AQ2 219 aa4.15□□□□□ -1.75
COPS3-206ENST00000471414 VRK1Q99986 396 aaPredicted RBP4.15□□□□□ -1.75
COPS3-206ENST00000471414 BRINP2Q9C0B6 783 aa4.15□□□□□ -1.75
COPS3-206ENST00000471414 GPR35Q9HC97 309 aa4.15□□□□□ -1.75
COPS3-206ENST00000471414 ETAA1Q9NY74 926 aa4.15□□□□□ -1.75
COPS3-206ENST00000471414 LRIT1Q9P2V4 623 aa4.15□□□□□ -1.75
COPS3-206ENST00000471414 ARPP21Q9UBL0 812 aaPredicted RBP4.15□□□□□ -1.75
COPS3-206ENST00000471414 ENTPD2Q9Y5L3 495 aa4.15□□□□□ -1.75
COPS3-206ENST00000471414 SPATA31A3Q5VYP0 1347 aa4.15□□□□□ -1.75
COPS3-206ENST00000471414 LRRC3CA6NJW4 275 aa4.14□□□□□ -1.75
COPS3-206ENST00000471414 PEX1O43933 1283 aa4.14□□□□□ -1.75
COPS3-206ENST00000471414 RBMXL2O75526 392 aaKnown RBP4.14□□□□□ -1.75
COPS3-206ENST00000471414 RPLP2P05387 115 aaKnown RBP4.14□□□□□ -1.75
COPS3-206ENST00000471414 FTH1P19P0C7X4 201 aa4.14□□□□□ -1.75
COPS3-206ENST00000471414 ZNF37AP17032 561 aaPredicted RBP4.14□□□□□ -1.75
COPS3-206ENST00000471414 CYP2C19P33261 490 aa4.14□□□□□ -1.75
COPS3-206ENST00000471414 HNRNPMP52272 730 aaKnown RBP eCLIP4.14□□□□□ -1.75
COPS3-206ENST00000471414 PIGFQ07326 219 aa4.14□□□□□ -1.75
COPS3-206ENST00000471414 UAP1L1Q3KQV9 507 aa4.14□□□□□ -1.75
COPS3-206ENST00000471414 TAPT1Q6NXT6 567 aa4.14□□□□□ -1.75
COPS3-206ENST00000471414 PPP1R32Q7Z5V6 425 aa4.14□□□□□ -1.75
COPS3-206ENST00000471414 PNMA8AQ86V59 439 aaPredicted RBP4.14□□□□□ -1.75
COPS3-206ENST00000471414 SLC30A5Q8TAD4 765 aa4.14□□□□□ -1.75
COPS3-206ENST00000471414 MYCBPAPQ8TBZ2 947 aa4.14□□□□□ -1.75
COPS3-206ENST00000471414 PGBD1Q96JS3 809 aa4.14□□□□□ -1.75
COPS3-206ENST00000471414 KRTAP9-8Q9BYQ0 159 aa4.14□□□□□ -1.75
COPS3-206ENST00000471414 IMPG2Q9BZV3 1241 aa4.14□□□□□ -1.75
COPS3-206ENST00000471414 KLK15Q9H2R5 256 aa4.14□□□□□ -1.75
COPS3-206ENST00000471414 TCF7L1Q9HCS4 588 aa4.14□□□□□ -1.75
COPS3-206ENST00000471414 SLC17A6Q9P2U8 582 aa4.14□□□□□ -1.75
COPS3-206ENST00000471414 COL4A3BPQ9Y5P4 624 aa4.14□□□□□ -1.75
COPS3-206ENST00000471414 CCDC151A5D8V7 595 aa4.13□□□□□ -1.75
COPS3-206ENST00000471414 LRRC14BA6NHZ5 514 aa4.13□□□□□ -1.75
COPS3-206ENST00000471414 VWC2LB2RUY7 222 aa4.13□□□□□ -1.75
COPS3-206ENST00000471414 ADM5C9JUS6 153 aa4.13□□□□□ -1.75
COPS3-206ENST00000471414 INO80B-WBP1J3KQ70 363 aa4.13□□□□□ -1.75
COPS3-206ENST00000471414 SLC16A6O15403 523 aa4.13□□□□□ -1.75
COPS3-206ENST00000471414 C1RP00736 705 aa4.13□□□□□ -1.75
COPS3-206ENST00000471414 PPP3CBP16298 524 aa4.13□□□□□ -1.75
COPS3-206ENST00000471414 PRDX5P30044 214 aa4.13□□□□□ -1.75
COPS3-206ENST00000471414 GRIA3P42263 894 aa4.13□□□□□ -1.75
COPS3-206ENST00000471414 RECQLP46063 649 aaPredicted RBP4.13□□□□□ -1.75
COPS3-206ENST00000471414 TOB1P50616 345 aaPredicted RBP4.13□□□□□ -1.75
COPS3-206ENST00000471414 HK3P52790 923 aa4.13□□□□□ -1.75
COPS3-206ENST00000471414 PROK1P58294 105 aa4.13□□□□□ -1.75
COPS3-206ENST00000471414 FPGSQ05932 587 aa4.13□□□□□ -1.75
COPS3-206ENST00000471414 FOXF2Q12947 444 aa4.13□□□□□ -1.75
COPS3-206ENST00000471414 HNRNPA0Q13151 305 aaKnown RBP4.13□□□□□ -1.75
COPS3-206ENST00000471414 NOGQ13253 232 aa4.13□□□□□ -1.75
COPS3-206ENST00000471414 TXNRD1Q16881 649 aa4.13□□□□□ -1.75
COPS3-206ENST00000471414 CD300EQ496F6 205 aaPredicted RBP4.13□□□□□ -1.75
COPS3-206ENST00000471414 LRCH2Q5VUJ6 765 aa4.13□□□□□ -1.75
COPS3-206ENST00000471414 PEG10Q86TG7 708 aaKnown RBP4.13□□□□□ -1.75
COPS3-206ENST00000471414 FAM109AQ8N4B1 249 aa4.13□□□□□ -1.75
COPS3-206ENST00000471414 NSUN7Q8NE18 718 aaKnown RBP4.13□□□□□ -1.75
COPS3-206ENST00000471414 SNX19Q92543 992 aa4.13□□□□□ -1.75
COPS3-206ENST00000471414 UROC1Q96N76 676 aa4.13□□□□□ -1.75
COPS3-206ENST00000471414 TRIB1Q96RU8 372 aa4.13□□□□□ -1.75
COPS3-206ENST00000471414 OSBPL9Q96SU4 736 aa4.13□□□□□ -1.75
COPS3-206ENST00000471414 INO80BQ9C086 356 aaPredicted RBP4.13□□□□□ -1.75
COPS3-206ENST00000471414 MAN1C1Q9NR34 630 aa4.13□□□□□ -1.75
COPS3-206ENST00000471414 MRPS18AQ9NVS2 196 aaKnown RBP4.13□□□□□ -1.75
COPS3-206ENST00000471414 POLHQ9Y253 713 aa4.13□□□□□ -1.75
COPS3-206ENST00000471414 FRMD4BQ9Y2L6 1034 aa4.13□□□□□ -1.75
COPS3-206ENST00000471414 WIPF3A6NGB9 483 aa4.12□□□□□ -1.75
COPS3-206ENST00000471414 ARIH2O95376 493 aa4.12□□□□□ -1.75
COPS3-206ENST00000471414 CHEK2O96017 543 aa4.12□□□□□ -1.75
COPS3-206ENST00000471414 GJB1P08034 283 aa4.12□□□□□ -1.75
COPS3-206ENST00000471414 PDCP20941 246 aa4.12□□□□□ -1.75
COPS3-206ENST00000471414 HABP2Q14520 560 aaPredicted RBP4.12□□□□□ -1.75
COPS3-206ENST00000471414 KIF22Q14807 665 aa4.12□□□□□ -1.75
COPS3-206ENST00000471414 TSHZ1Q6ZSZ6 1077 aa4.12□□□□□ -1.75
COPS3-206ENST00000471414 USP45Q70EL2 814 aa4.12□□□□□ -1.75
COPS3-206ENST00000471414 FAM9AQ8IZU1 332 aaPredicted RBP4.12□□□□□ -1.75
COPS3-206ENST00000471414 CPA6Q8N4T0 437 aa4.12□□□□□ -1.75
COPS3-206ENST00000471414 C3orf20Q8ND61 904 aa4.12□□□□□ -1.75
COPS3-206ENST00000471414 SLC17A8Q8NDX2 589 aa4.12□□□□□ -1.75
COPS3-206ENST00000471414 SARAFQ96BY9 339 aa4.12□□□□□ -1.75
COPS3-206ENST00000471414 ADARB2Q9NS39 739 aaKnown RBP4.12□□□□□ -1.75
COPS3-206ENST00000471414 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.12□□□□□ -1.75
COPS3-206ENST00000471414 CGB1A6NKQ9 187 aa4.11□□□□□ -1.75
COPS3-206ENST00000471414 POU2F2P09086 479 aa4.11□□□□□ -1.75
COPS3-206ENST00000471414 PCSK6P29122 969 aa4.11□□□□□ -1.75
COPS3-206ENST00000471414 NPTX2P47972 431 aa4.11□□□□□ -1.75
COPS3-206ENST00000471414 PIK3CGP48736 1102 aa4.11□□□□□ -1.75
COPS3-206ENST00000471414 NXPH1P58417 271 aa4.11□□□□□ -1.75
COPS3-206ENST00000471414 ITIH3Q06033 890 aa4.11□□□□□ -1.75
COPS3-206ENST00000471414 BRDTQ58F21 947 aaPredicted RBP4.11□□□□□ -1.75
COPS3-206ENST00000471414 KAZNQ674X7 775 aa4.11□□□□□ -1.75
COPS3-206ENST00000471414 SRRM1Q8IYB3 904 aaKnown RBP4.11□□□□□ -1.75
COPS3-206ENST00000471414 MIER2Q8N344 545 aa4.11□□□□□ -1.75
COPS3-206ENST00000471414 AOPEPQ8N6M6 819 aa4.11□□□□□ -1.75
COPS3-206ENST00000471414 GPATCH3Q96I76 525 aa4.11□□□□□ -1.75
COPS3-206ENST00000471414 SMOQ99835 787 aa4.11□□□□□ -1.75
COPS3-206ENST00000471414 MRPL46Q9H2W6 279 aaKnown RBP4.11□□□□□ -1.75
COPS3-206ENST00000471414 WDCPQ9H6R7 721 aa4.11□□□□□ -1.75
COPS3-206ENST00000471414 BRD9Q9H8M2 597 aa4.11□□□□□ -1.75
COPS3-206ENST00000471414 RSAD1Q9HA92 442 aa4.11□□□□□ -1.75
COPS3-206ENST00000471414 KIAA1586Q9HCI6 787 aa4.11□□□□□ -1.75
COPS3-206ENST00000471414 GNL3LQ9NVN8 582 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms