RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 AVENQ9NQS1 362 aaPredicted RBP16.63■□□□□ 0.25
COL1A1-203ENST00000471344 OLFML3Q9NRN5 406 aa16.63■□□□□ 0.25
COL1A1-203ENST00000471344 DPP3Q9NY33 737 aa16.63■□□□□ 0.25
COL1A1-203ENST00000471344 DERAQ9Y315 318 aa16.63■□□□□ 0.25
COL1A1-203ENST00000471344 C2CD2Q9Y426 696 aa16.63■□□□□ 0.25
COL1A1-203ENST00000471344 NCANO14594 1321 aa16.63■□□□□ 0.25
COL1A1-203ENST00000471344 ODC1P11926 461 aa16.62■□□□□ 0.25
COL1A1-203ENST00000471344 TYMPP19971 482 aa16.62■□□□□ 0.25
COL1A1-203ENST00000471344 NUBP1P53384 320 aa16.62■□□□□ 0.25
COL1A1-203ENST00000471344 DUSP4Q13115 394 aa16.62■□□□□ 0.25
COL1A1-203ENST00000471344 SNW1Q13573 536 aaKnown RBP16.62■□□□□ 0.25
COL1A1-203ENST00000471344 DTWD2Q8NBA8 298 aa16.62■□□□□ 0.25
COL1A1-203ENST00000471344 ATAD1Q8NBU5 361 aa16.62■□□□□ 0.25
COL1A1-203ENST00000471344 DHX58Q96C10 678 aa16.62■□□□□ 0.25
COL1A1-203ENST00000471344 PCIF1Q9H4Z3 704 aa16.62■□□□□ 0.25
COL1A1-203ENST00000471344 ASB7Q9H672 318 aa16.62■□□□□ 0.25
COL1A1-203ENST00000471344 SLC27A5Q9Y2P5 690 aa16.62■□□□□ 0.25
COL1A1-203ENST00000471344 FRYLO94915 3013 aa16.62■□□□□ 0.25
COL1A1-203ENST00000471344 MTMR11A4FU01 709 aa16.61■□□□□ 0.25
COL1A1-203ENST00000471344 OR6C75A6NL08 312 aa16.61■□□□□ 0.25
COL1A1-203ENST00000471344 PPP6R2O75170 966 aa16.61■□□□□ 0.25
COL1A1-203ENST00000471344 ZSCAN22P10073 491 aaPredicted RBP16.61■□□□□ 0.25
COL1A1-203ENST00000471344 MYL4P12829 197 aa16.61■□□□□ 0.25
COL1A1-203ENST00000471344 GLULP15104 373 aa16.61■□□□□ 0.25
COL1A1-203ENST00000471344 RFX1P22670 979 aa16.61■□□□□ 0.25
COL1A1-203ENST00000471344 CASP1P29466 404 aa16.61■□□□□ 0.25
COL1A1-203ENST00000471344 HOXD13P35453 343 aa16.61■□□□□ 0.25
COL1A1-203ENST00000471344 FAM78AQ5JUQ0 283 aa16.61■□□□□ 0.25
COL1A1-203ENST00000471344 PDZD4Q76G19 769 aaPredicted RBP16.61■□□□□ 0.25
COL1A1-203ENST00000471344 NOC3LQ8WTT2 800 aaKnown RBP16.61■□□□□ 0.25
COL1A1-203ENST00000471344 ZNF396Q96N95 335 aaPredicted RBP16.61■□□□□ 0.25
COL1A1-203ENST00000471344 TSPAN18Q96SJ8 248 aa16.61■□□□□ 0.25
COL1A1-203ENST00000471344 PYM1Q9BRP8 204 aaKnown RBP16.61■□□□□ 0.25
COL1A1-203ENST00000471344 GDE1Q9NZC3 331 aa16.61■□□□□ 0.25
COL1A1-203ENST00000471344 COL4A2P08572 1712 aa16.61■□□□□ 0.25
COL1A1-203ENST00000471344 CYB561D2O14569 222 aa16.6■□□□□ 0.25
COL1A1-203ENST00000471344 YEATS4O95619 227 aa16.6■□□□□ 0.25
COL1A1-203ENST00000471344 F13A1P00488 732 aa16.6■□□□□ 0.25
COL1A1-203ENST00000471344 CYP11A1P05108 521 aa16.6■□□□□ 0.25
COL1A1-203ENST00000471344 CD72P21854 359 aa16.6■□□□□ 0.25
COL1A1-203ENST00000471344 GPR17Q13304 367 aa16.6■□□□□ 0.25
COL1A1-203ENST00000471344 GRM2Q14416 872 aa16.6■□□□□ 0.25
COL1A1-203ENST00000471344 ANGPT1Q15389 498 aa16.6■□□□□ 0.25
COL1A1-203ENST00000471344 WSCD1Q658N2 575 aa16.6■□□□□ 0.25
COL1A1-203ENST00000471344 LMBRD2Q68DH5 695 aaPredicted RBP16.6■□□□□ 0.25
COL1A1-203ENST00000471344 CENPPQ6IPU0 288 aa16.6■□□□□ 0.25
COL1A1-203ENST00000471344 TMC8Q8IU68 726 aa16.6■□□□□ 0.25
COL1A1-203ENST00000471344 BRSK2Q8IWQ3 736 aa16.6■□□□□ 0.25
COL1A1-203ENST00000471344 SYCP3Q8IZU3 236 aa16.6■□□□□ 0.25
COL1A1-203ENST00000471344 SHKBP1Q8TBC3 707 aa16.6■□□□□ 0.25
COL1A1-203ENST00000471344 BORCS6Q96GS4 357 aa16.6■□□□□ 0.25
COL1A1-203ENST00000471344 CHAMP1Q96JM3 812 aa16.6■□□□□ 0.25
COL1A1-203ENST00000471344 LRRC3Q9BY71 257 aa16.6■□□□□ 0.25
COL1A1-203ENST00000471344 TRIM9Q9C026 710 aa16.6■□□□□ 0.25
COL1A1-203ENST00000471344 TNMDQ9H2S6 317 aa16.6■□□□□ 0.25
COL1A1-203ENST00000471344 ZNF334Q9HCZ1 680 aaPredicted RBP16.6■□□□□ 0.25
COL1A1-203ENST00000471344 KBTBD4Q9NVX7 518 aa16.6■□□□□ 0.25
COL1A1-203ENST00000471344 RBAKQ9NYW8 714 aaPredicted RBP16.6■□□□□ 0.25
COL1A1-203ENST00000471344 DLGAP2Q9P1A6 1054 aa16.6■□□□□ 0.25
COL1A1-203ENST00000471344 EXOC7Q9UPT5 735 aa16.6■□□□□ 0.25
COL1A1-203ENST00000471344 MTF2Q9Y483 593 aaPredicted RBP16.6■□□□□ 0.25
COL1A1-203ENST00000471344 PCDHB13Q9Y5F0 798 aa16.6■□□□□ 0.25
COL1A1-203ENST00000471344 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.6■□□□□ 0.25
COL1A1-203ENST00000471344 PTPRJQ12913 1337 aa16.6■□□□□ 0.25
COL1A1-203ENST00000471344 MIA3Q5JRA6 1907 aa16.59■□□□□ 0.25
COL1A1-203ENST00000471344 CUTAO60888 179 aa16.59■□□□□ 0.25
COL1A1-203ENST00000471344 ECI2O75521 394 aa16.59■□□□□ 0.25
COL1A1-203ENST00000471344 IL18RAPO95256 599 aa16.59■□□□□ 0.25
COL1A1-203ENST00000471344 POLR2BP30876 1174 aaKnown RBP16.59■□□□□ 0.25
COL1A1-203ENST00000471344 TAF6P49848 677 aa16.59■□□□□ 0.25
COL1A1-203ENST00000471344 EPHA5P54756 1037 aa16.59■□□□□ 0.25
COL1A1-203ENST00000471344 TFAMQ00059 246 aaKnown RBP16.59■□□□□ 0.25
COL1A1-203ENST00000471344 MYBPC2Q14324 1141 aa16.59■□□□□ 0.25
COL1A1-203ENST00000471344 POSTNQ15063 836 aa16.59■□□□□ 0.25
COL1A1-203ENST00000471344 TEAD2Q15562 447 aa16.59■□□□□ 0.25
COL1A1-203ENST00000471344 SLC39A12Q504Y0 691 aa16.59■□□□□ 0.25
COL1A1-203ENST00000471344 STXBP5Q5T5C0 1151 aa16.59■□□□□ 0.25
COL1A1-203ENST00000471344 IQCEQ6IPM2 695 aa16.59■□□□□ 0.25
COL1A1-203ENST00000471344 PHLDB3Q6NSJ2 640 aa16.59■□□□□ 0.25
COL1A1-203ENST00000471344 FRMD5Q7Z6J6 570 aa16.59■□□□□ 0.25
COL1A1-203ENST00000471344 CCDC65Q8IXS2 484 aa16.59■□□□□ 0.25
COL1A1-203ENST00000471344 ELMOD1Q8N336 334 aa16.59■□□□□ 0.25
COL1A1-203ENST00000471344 C1orf127Q8N9H9 656 aa16.59■□□□□ 0.25
COL1A1-203ENST00000471344 PJA1Q8NG27 643 aa16.59■□□□□ 0.25
COL1A1-203ENST00000471344 CXorf38Q8TB03 319 aa16.59■□□□□ 0.25
COL1A1-203ENST00000471344 ZNF512Q96ME7 567 aaPredicted RBP16.59■□□□□ 0.25
COL1A1-203ENST00000471344 ASB16Q96NS5 453 aa16.59■□□□□ 0.25
COL1A1-203ENST00000471344 PDE11AQ9HCR9 933 aa16.59■□□□□ 0.25
COL1A1-203ENST00000471344 ASAH2Q9NR71 780 aa16.59■□□□□ 0.25
COL1A1-203ENST00000471344 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.58■□□□□ 0.24
COL1A1-203ENST00000471344 A0A1W2PRU2 124 aa16.58■□□□□ 0.24
COL1A1-203ENST00000471344 ITGB3P05106 788 aa16.58■□□□□ 0.24
COL1A1-203ENST00000471344 HSP90AA1P07900 732 aaKnown RBP16.58■□□□□ 0.24
COL1A1-203ENST00000471344 GARTP22102 1010 aa16.58■□□□□ 0.24
COL1A1-203ENST00000471344 VIPR2P41587 438 aa16.58■□□□□ 0.24
COL1A1-203ENST00000471344 STARD6P59095 220 aa16.58■□□□□ 0.24
COL1A1-203ENST00000471344 ASIC1P78348 528 aa16.58■□□□□ 0.24
COL1A1-203ENST00000471344 MLF2Q15773 248 aaPredicted RBP16.58■□□□□ 0.24
COL1A1-203ENST00000471344 CCDC142Q17RM4 750 aa16.58■□□□□ 0.24
COL1A1-203ENST00000471344 SLC44A4Q53GD3 710 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms