RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 ANKRD36BP1Q96IX9 119 aa18.71■□□□□ 0.58
HSPG2-208ENST00000471322 CPB2Q96IY4 423 aa18.71■□□□□ 0.58
HSPG2-208ENST00000471322 YME1L1Q96TA2 773 aa18.71■□□□□ 0.58
HSPG2-208ENST00000471322 ADPGKQ9BRR6 497 aa18.71■□□□□ 0.58
HSPG2-208ENST00000471322 PI4K2AQ9BTU6 479 aa18.71■□□□□ 0.58
HSPG2-208ENST00000471322 PACSIN1Q9BY11 444 aa18.71■□□□□ 0.58
HSPG2-208ENST00000471322 TTYH1Q9H313 450 aaPredicted RBP18.71■□□□□ 0.58
HSPG2-208ENST00000471322 PDZD7Q9H5P4 517 aa18.71■□□□□ 0.58
HSPG2-208ENST00000471322 CERS4Q9HA82 394 aa18.71■□□□□ 0.58
HSPG2-208ENST00000471322 RGS18Q9NS28 235 aa18.71■□□□□ 0.58
HSPG2-208ENST00000471322 PCDHGC5Q9Y5F6 944 aa18.71■□□□□ 0.58
HSPG2-208ENST00000471322 PCDHA11Q9Y5I1 949 aa18.71■□□□□ 0.58
HSPG2-208ENST00000471322 CAPN6Q9Y6Q1 641 aa18.71■□□□□ 0.58
HSPG2-208ENST00000471322 A0A1B0GUA9 196 aa18.7■□□□□ 0.58
HSPG2-208ENST00000471322 ATP1A1P05023 1023 aaKnown RBP18.7■□□□□ 0.58
HSPG2-208ENST00000471322 TMEM253P0C7T8 217 aa18.7■□□□□ 0.58
HSPG2-208ENST00000471322 ARF4P18085 180 aaPredicted RBP18.7■□□□□ 0.58
HSPG2-208ENST00000471322 GATMP50440 423 aa18.7■□□□□ 0.58
HSPG2-208ENST00000471322 PDE6CP51160 858 aa18.7■□□□□ 0.58
HSPG2-208ENST00000471322 TRPC3Q13507 836 aa18.7■□□□□ 0.58
HSPG2-208ENST00000471322 RAB30Q15771 203 aa18.7■□□□□ 0.58
HSPG2-208ENST00000471322 SGSM1Q2NKQ1 1148 aa18.7■□□□□ 0.58
HSPG2-208ENST00000471322 TWF2Q6IBS0 349 aaKnown RBP18.7■□□□□ 0.58
HSPG2-208ENST00000471322 SLC24A5Q71RS6 500 aa18.7■□□□□ 0.58
HSPG2-208ENST00000471322 CDR2LQ86X02 465 aaPredicted RBP18.7■□□□□ 0.58
HSPG2-208ENST00000471322 ZNF677Q86XU0 584 aa18.7■□□□□ 0.58
HSPG2-208ENST00000471322 DEFB123Q8N688 67 aa18.7■□□□□ 0.58
HSPG2-208ENST00000471322 EPS8L1Q8TE68 723 aa18.7■□□□□ 0.58
HSPG2-208ENST00000471322 ASB7Q9H672 318 aa18.7■□□□□ 0.58
HSPG2-208ENST00000471322 SLC28A3Q9HAS3 691 aa18.7■□□□□ 0.58
HSPG2-208ENST00000471322 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.7■□□□□ 0.581e-7■■■■■ 50.3
HSPG2-208ENST00000471322 SEPT11Q9NVA2 429 aaKnown RBP18.7■□□□□ 0.58
HSPG2-208ENST00000471322 SALL4Q9UJQ4 1053 aa18.7■□□□□ 0.58
HSPG2-208ENST00000471322 NOCTQ9UK39 431 aaKnown RBP18.7■□□□□ 0.58
HSPG2-208ENST00000471322 MYO9BQ13459 2157 aa18.7■□□□□ 0.58
HSPG2-208ENST00000471322 C9IYK1 514 aa18.69■□□□□ 0.58
HSPG2-208ENST00000471322 ENC1O14682 589 aa18.69■□□□□ 0.58
HSPG2-208ENST00000471322 BUB1O43683 1085 aa18.69■□□□□ 0.58
HSPG2-208ENST00000471322 TSPAN1O60635 241 aa18.69■□□□□ 0.58
HSPG2-208ENST00000471322 TADA3O75528 432 aa18.69■□□□□ 0.58
HSPG2-208ENST00000471322 TMEM191BP0C7N4 346 aa18.69■□□□□ 0.58
HSPG2-208ENST00000471322 STAG3L1P0CL83 205 aa18.69■□□□□ 0.58
HSPG2-208ENST00000471322 KRT5P13647 590 aa18.69■□□□□ 0.58
HSPG2-208ENST00000471322 CYP11B1P15538 503 aa18.69■□□□□ 0.58
HSPG2-208ENST00000471322 GALCP54803 685 aa18.69■□□□□ 0.58
HSPG2-208ENST00000471322 CDR2Q01850 454 aa18.69■□□□□ 0.58
HSPG2-208ENST00000471322 CUL2Q13617 745 aa18.69■□□□□ 0.58
HSPG2-208ENST00000471322 DCAF4L1Q3SXM0 396 aa18.69■□□□□ 0.58
HSPG2-208ENST00000471322 PPP2R2DQ66LE6 453 aa18.69■□□□□ 0.58
HSPG2-208ENST00000471322 OLIG1Q8TAK6 271 aa18.69■□□□□ 0.58
HSPG2-208ENST00000471322 CTNNBL1Q8WYA6 563 aaPredicted RBP18.69■□□□□ 0.58
HSPG2-208ENST00000471322 TAF4BQ92750 862 aa18.69■□□□□ 0.58
HSPG2-208ENST00000471322 FAXDC2Q96IV6 333 aa18.69■□□□□ 0.58
HSPG2-208ENST00000471322 RAD9AQ99638 391 aa18.69■□□□□ 0.58
HSPG2-208ENST00000471322 MTUS1Q9ULD2 1270 aa18.69■□□□□ 0.58
HSPG2-208ENST00000471322 LRFN2Q9ULH4 789 aa18.69■□□□□ 0.58
HSPG2-208ENST00000471322 TTC3P53804 2025 aa18.69■□□□□ 0.58
HSPG2-208ENST00000471322 ANKRD62A6NC57 917 aa18.68■□□□□ 0.58
HSPG2-208ENST00000471322 FGFR1P11362 822 aa18.68■□□□□ 0.58
HSPG2-208ENST00000471322 TCP1P17987 556 aaKnown RBP18.68■□□□□ 0.58
HSPG2-208ENST00000471322 HOXA11P31270 313 aaPredicted RBP18.68■□□□□ 0.58
HSPG2-208ENST00000471322 NOP2P46087 812 aaKnown RBP18.68■□□□□ 0.58
HSPG2-208ENST00000471322 TFAMQ00059 246 aaKnown RBP18.68■□□□□ 0.58
HSPG2-208ENST00000471322 CKAP4Q07065 602 aaKnown RBP18.68■□□□□ 0.58
HSPG2-208ENST00000471322 ZNF697Q5TEC3 545 aa18.68■□□□□ 0.58
HSPG2-208ENST00000471322 CD302Q8IX05 232 aa18.68■□□□□ 0.58
HSPG2-208ENST00000471322 ISCUQ9H1K1 167 aa18.68■□□□□ 0.58
HSPG2-208ENST00000471322 SNX12Q9UMY4 172 aa18.68■□□□□ 0.58
HSPG2-208ENST00000471322 INSL6Q9Y581 213 aa18.68■□□□□ 0.58
HSPG2-208ENST00000471322 PCDHB7Q9Y5E2 793 aa18.68■□□□□ 0.58
HSPG2-208ENST00000471322 PCDHB2Q9Y5E7 798 aa18.68■□□□□ 0.58
HSPG2-208ENST00000471322 RTN2O75298 545 aa18.67■□□□□ 0.58
HSPG2-208ENST00000471322 ASS1P00966 412 aaKnown RBP18.67■□□□□ 0.58
HSPG2-208ENST00000471322 AXLP30530 894 aa18.67■□□□□ 0.58
HSPG2-208ENST00000471322 NOP14P78316 857 aaKnown RBP18.67■□□□□ 0.58
HSPG2-208ENST00000471322 PAN2Q504Q3 1202 aaKnown RBP18.67■□□□□ 0.58
HSPG2-208ENST00000471322 NOP9Q86U38 636 aaKnown RBP18.67■□□□□ 0.58
HSPG2-208ENST00000471322 SLC47A2Q86VL8 602 aa18.67■□□□□ 0.58
HSPG2-208ENST00000471322 NT5DC4Q86YG4 428 aa18.67■□□□□ 0.58
HSPG2-208ENST00000471322 NPAS4Q8IUM7 802 aa18.67■□□□□ 0.58
HSPG2-208ENST00000471322 SLC20A1Q8WUM9 679 aa18.67■□□□□ 0.58
HSPG2-208ENST00000471322 GOLGA1Q92805 767 aa18.67■□□□□ 0.58
HSPG2-208ENST00000471322 RPGRIP1Q96KN7 1286 aa18.67■□□□□ 0.58
HSPG2-208ENST00000471322 MTMR12Q9C0I1 747 aa18.67■□□□□ 0.58
HSPG2-208ENST00000471322 ZNF576Q9H609 170 aa18.67■□□□□ 0.58
HSPG2-208ENST00000471322 CNTN6Q9UQ52 1028 aa18.67■□□□□ 0.58
HSPG2-208ENST00000471322 CTAGE15A4D2H0 777 aa18.67■□□□□ 0.58
HSPG2-208ENST00000471322 PALMO75781 387 aa18.67■□□□□ 0.58
HSPG2-208ENST00000471322 CTAGE8P0CG41 777 aa18.67■□□□□ 0.58
HSPG2-208ENST00000471322 OSTNP61366 133 aa18.67■□□□□ 0.58
HSPG2-208ENST00000471322 CTAGE6Q86UF2 777 aa18.67■□□□□ 0.58
HSPG2-208ENST00000471322 CTAGE4Q8IX94 777 aa18.67■□□□□ 0.58
HSPG2-208ENST00000471322 SYCE1Q8N0S2 351 aa18.67■□□□□ 0.58
HSPG2-208ENST00000471322 CRIPAKQ8N1N5 446 aa18.67■□□□□ 0.58
HSPG2-208ENST00000471322 UBE2Q2Q8WVN8 375 aa18.67■□□□□ 0.58
HSPG2-208ENST00000471322 RFFLQ8WZ73 363 aa18.67■□□□□ 0.58
HSPG2-208ENST00000471322 TSC1Q92574 1164 aa18.67■□□□□ 0.58
HSPG2-208ENST00000471322 ACAP3Q96P50 834 aa18.67■□□□□ 0.58
HSPG2-208ENST00000471322 APOBEC3GQ9HC16 384 aaKnown RBP18.67■□□□□ 0.58
HSPG2-208ENST00000471322 HYOU1Q9Y4L1 999 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms