RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 COL3A1P02461 1466 aaPredicted RBP1.92□□□□□ -2.1
UBXN4-207ENST00000471246 CCDC195A0A1B0GUA6 201 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 LRRC14BA6NHZ5 514 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 ZNF785A8K8V0 405 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 NT5C1B-RDH14C9J2C7 533 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 E9PLN8 166 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 F2RL2O00254 374 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 YY2O15391 372 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 PROM1O43490 865 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 PEX1O43933 1283 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 DTNBO60941 627 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 SUN1O94901 812 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 C1RP00736 705 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 RPLP2P05387 115 aaKnown RBP1.91□□□□□ -2.1
UBXN4-207ENST00000471246 GNAI3P08754 354 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 SRGNP10124 158 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 PPP3CBP16298 524 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 MALP21145 153 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 ANXA11P50995 505 aaKnown RBP1.91□□□□□ -2.1
UBXN4-207ENST00000471246 FXR1P51114 621 aaKnown RBP eCLIP1.91□□□□□ -2.1
UBXN4-207ENST00000471246 MAPK10P53779 464 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 RPS7P62081 194 aaKnown RBP1.91□□□□□ -2.1
UBXN4-207ENST00000471246 PSMC1P62191 440 aaKnown RBP1.91□□□□□ -2.1
UBXN4-207ENST00000471246 GNAI1P63096 354 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 DSC2Q02487 901 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 PIGFQ07326 219 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 CD300EQ496F6 205 aaPredicted RBP1.91□□□□□ -2.1
UBXN4-207ENST00000471246 KHDC1Q4VXA5 237 aaKnown RBP1.91□□□□□ -2.1
UBXN4-207ENST00000471246 CCDC93Q567U6 631 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 TMEM240Q5SV17 173 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 SP5Q6BEB4 398 aaPredicted RBP1.91□□□□□ -2.1
UBXN4-207ENST00000471246 VWA1Q6PCB0 445 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 PEG10Q86TG7 708 aaKnown RBP1.91□□□□□ -2.1
UBXN4-207ENST00000471246 CFAP52Q8N1V2 620 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 MIER2Q8N344 545 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 AOPEPQ8N6M6 819 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 FAM98AQ8NCA5 519 aaKnown RBP1.91□□□□□ -2.1
UBXN4-207ENST00000471246 SLC17A8Q8NDX2 589 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 NSUN7Q8NE18 718 aaKnown RBP1.91□□□□□ -2.1
UBXN4-207ENST00000471246 IL17RDQ8NFM7 739 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 SLC30A5Q8TAD4 765 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 MYCBPAPQ8TBZ2 947 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 LPIN2Q92539 896 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 SNX19Q92543 992 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 RGMAQ96B86 450 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 PDLIM2Q96JY6 352 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 VRK1Q99986 396 aaPredicted RBP1.91□□□□□ -2.1
UBXN4-207ENST00000471246 VKORC1Q9BQB6 163 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 HEPHQ9BQS7 1158 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 LRFN3Q9BTN0 628 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 KLK15Q9H2R5 256 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 PCDH12Q9NPG4 1184 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 NEU2Q9Y3R4 380 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 COX11Q9Y6N1 276 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 WASHC2CQ9Y4E1 1318 aa1.91□□□□□ -2.1
UBXN4-207ENST00000471246 E7ENX8 843 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 MPPED1O15442 326 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 C1QL1O75973 258 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 IGLV2-14P01704 120 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 FTLP02792 175 aaPredicted RBP1.9□□□□□ -2.11
UBXN4-207ENST00000471246 ANXA1P04083 346 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 CHRM2P08172 466 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 GATA3P23771 443 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 CCND1P24385 295 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 FOLR3P41439 243 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 RECQLP46063 649 aaPredicted RBP1.9□□□□□ -2.11
UBXN4-207ENST00000471246 NPTX2P47972 431 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 PIK3CGP48736 1102 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 RARRES1P49788 294 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 ZNF135P52742 658 aaPredicted RBP1.9□□□□□ -2.11
UBXN4-207ENST00000471246 CACNA2D1P54289 1103 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 ELLP55199 621 aaPredicted RBP1.9□□□□□ -2.11
UBXN4-207ENST00000471246 PROK1P58294 105 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 POU6F2P78424 691 aaPredicted RBP1.9□□□□□ -2.11
UBXN4-207ENST00000471246 TAP2Q03519 686 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 FPGSQ05932 587 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 NOGQ13253 232 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 SNAPC2Q13487 334 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 DYRK1AQ13627 763 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 TXNRD1Q16881 649 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 NBPF8Q3BBV2 869 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 KIAA0895LQ68EN5 471 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 CRELD2Q6UXH1 353 aaPredicted RBP1.9□□□□□ -2.11
UBXN4-207ENST00000471246 TMPRSS9Q7Z410 1059 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 CATIPQ7Z7H3 387 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 TTC7BQ86TV6 843 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 ZBTB46Q86UZ6 589 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 ARHGEF25Q86VW2 580 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 PDSS2Q86YH6 399 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 B3GALNT2Q8NCR0 500 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 TOR1AIP2Q8NFQ8 470 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 FBXO41Q8TF61 875 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 TFAP2BQ92481 460 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 NELL1Q92832 810 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 SCAMP4Q969E2 229 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 FBXL20Q96IG2 436 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 LRIG1Q96JA1 1093 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 UROC1Q96N76 676 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 TRIB1Q96RU8 372 aa1.9□□□□□ -2.11
UBXN4-207ENST00000471246 NELL2Q99435 816 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms