RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 SUSD3Q96L08 255 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 PNMA5Q96PV4 448 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 CORO1BQ9BR76 489 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 ANP32EQ9BTT0 268 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 TRMT61BQ9BVS5 477 aaKnown RBP9.87□□□□□ -0.83
SF3A1-206ENST00000471037 BRD9Q9H8M2 597 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 C17orf75Q9HAS0 396 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 TRPV4Q9HBA0 871 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 CYP4F11Q9HBI6 524 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 POLD4Q9HCU8 107 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 FBXL5Q9UKA1 691 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 KIAA1024Q9UPX6 916 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 NUB1Q9Y5A7 615 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 CCDC169A6NNP5 214 aa9.86□□□□□ -0.83
SF3A1-206ENST00000471037 NRG2O14511 850 aaPredicted RBP9.86□□□□□ -0.83
SF3A1-206ENST00000471037 MEFVO15553 781 aaPredicted RBP9.86□□□□□ -0.83
SF3A1-206ENST00000471037 MOSPD3O75425 235 aa9.86□□□□□ -0.83
SF3A1-206ENST00000471037 LETM1O95202 739 aaPredicted RBP9.86□□□□□ -0.83
SF3A1-206ENST00000471037 PSMC3P17980 439 aa9.86□□□□□ -0.83
SF3A1-206ENST00000471037 NRLP54845 237 aa9.86□□□□□ -0.83
SF3A1-206ENST00000471037 MLLT6P55198 1093 aaPredicted RBP9.86□□□□□ -0.83
SF3A1-206ENST00000471037 PEX3P56589 373 aa9.86□□□□□ -0.83
SF3A1-206ENST00000471037 OSTNP61366 133 aa9.86□□□□□ -0.83
SF3A1-206ENST00000471037 MAPK7Q13164 816 aa9.86□□□□□ -0.83
SF3A1-206ENST00000471037 GRM2Q14416 872 aa9.86□□□□□ -0.83
SF3A1-206ENST00000471037 CTXN3Q4LDR2 81 aa9.86□□□□□ -0.83
SF3A1-206ENST00000471037 CYP4A22Q5TCH4 519 aa9.86□□□□□ -0.83
SF3A1-206ENST00000471037 IQCEQ6IPM2 695 aa9.86□□□□□ -0.83
SF3A1-206ENST00000471037 MPZL3Q6UWV2 235 aa9.86□□□□□ -0.83
SF3A1-206ENST00000471037 VITQ6UXI7 678 aa9.86□□□□□ -0.83
SF3A1-206ENST00000471037 ELMOD1Q8N336 334 aa9.86□□□□□ -0.83
SF3A1-206ENST00000471037 APPL2Q8NEU8 664 aa9.86□□□□□ -0.83
SF3A1-206ENST00000471037 DEPDC1BQ8WUY9 529 aa9.86□□□□□ -0.83
SF3A1-206ENST00000471037 DRC1Q96MC2 740 aa9.86□□□□□ -0.83
SF3A1-206ENST00000471037 ACAP3Q96P50 834 aa9.86□□□□□ -0.83
SF3A1-206ENST00000471037 TARS2Q9BW92 718 aaKnown RBP9.86□□□□□ -0.83
SF3A1-206ENST00000471037 PANK2Q9BZ23 570 aa9.86□□□□□ -0.83
SF3A1-206ENST00000471037 TNMDQ9H2S6 317 aa9.86□□□□□ -0.83
SF3A1-206ENST00000471037 ZNF334Q9HCZ1 680 aaPredicted RBP9.86□□□□□ -0.83
SF3A1-206ENST00000471037 TMEM63CQ9P1W3 806 aa9.86□□□□□ -0.83
SF3A1-206ENST00000471037 CEP72Q9P209 647 aa9.86□□□□□ -0.83
SF3A1-206ENST00000471037 AFF4Q9UHB7 1163 aaKnown RBP9.86□□□□□ -0.83
SF3A1-206ENST00000471037 SERTAD1Q9UHV2 236 aa9.86□□□□□ -0.83
SF3A1-206ENST00000471037 DNM3Q9UQ16 869 aa9.86□□□□□ -0.83
SF3A1-206ENST00000471037 TRIP11Q15643 1979 aa9.86□□□□□ -0.83
SF3A1-206ENST00000471037 E9PMD0 336 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 ARNTLO00327 626 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 HIP1RO75146 1068 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 MYL1P05976 194 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 CCR3P51677 355 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 ATXN1P54253 815 aaKnown RBP9.85□□□□□ -0.83
SF3A1-206ENST00000471037 ARPP19P56211 112 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 AMPD3Q01432 767 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 PPP2R5DQ14738 602 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 MFSD6LQ8IWD5 586 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 BEST2Q8NFU1 509 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 LARP4BQ92615 738 aaKnown RBP9.85□□□□□ -0.83
SF3A1-206ENST00000471037 RAD54LQ92698 747 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 DDX12PQ92771 950 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 E2F7Q96AV8 911 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 C18orf25Q96B23 403 aaPredicted RBP9.85□□□□□ -0.83
SF3A1-206ENST00000471037 MSANTD3Q96H12 275 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 ZNF512Q96ME7 567 aaPredicted RBP9.85□□□□□ -0.83
SF3A1-206ENST00000471037 ZSWIM3Q96MP5 696 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 PLIN2Q99541 437 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 NTPCRQ9BSD7 190 aaKnown RBP9.85□□□□□ -0.83
SF3A1-206ENST00000471037 RTKNQ9BST9 563 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 TCHPQ9BT92 498 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 RUSC1Q9BVN2 902 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 TIPINQ9BVW5 301 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 OXCT2Q9BYC2 517 aaPredicted RBP9.85□□□□□ -0.83
SF3A1-206ENST00000471037 LRRC27Q9C0I9 530 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 GPR88Q9GZN0 384 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 KMT5AQ9NQR1 393 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 ASAH2Q9NR71 780 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 BLOC1S4Q9NUP1 217 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 KBTBD4Q9NVX7 518 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 GMEB2Q9UKD1 530 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 CDV3Q9UKY7 258 aaKnown RBP9.85□□□□□ -0.83
SF3A1-206ENST00000471037 NDRG2Q9UN36 371 aaKnown RBP9.85□□□□□ -0.83
SF3A1-206ENST00000471037 PCDHB8Q9UN66 801 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.85□□□□□ -0.83
SF3A1-206ENST00000471037 PIAS3Q9Y6X2 628 aa9.85□□□□□ -0.83
SF3A1-206ENST00000471037 NCANO14594 1321 aa9.84□□□□□ -0.83
SF3A1-206ENST00000471037 M0QZQ0 153 aa9.84□□□□□ -0.83
SF3A1-206ENST00000471037 TOM1L1O75674 476 aa9.84□□□□□ -0.83
SF3A1-206ENST00000471037 OAZ2O95190 189 aa9.84□□□□□ -0.83
SF3A1-206ENST00000471037 PAPSS2O95340 614 aaPredicted RBP9.84□□□□□ -0.83
SF3A1-206ENST00000471037 CPB1P15086 417 aa9.84□□□□□ -0.83
SF3A1-206ENST00000471037 GUCY2CP25092 1073 aa9.84□□□□□ -0.83
SF3A1-206ENST00000471037 GDI1P31150 447 aa9.84□□□□□ -0.83
SF3A1-206ENST00000471037 AARSP49588 968 aaKnown RBP eCLIP9.84□□□□□ -0.83
SF3A1-206ENST00000471037 FCHO2Q0JRZ9 810 aa9.84□□□□□ -0.83
SF3A1-206ENST00000471037 TWF1Q12792 350 aa9.84□□□□□ -0.83
SF3A1-206ENST00000471037 NOLC1Q14978 699 aaKnown RBP eCLIP9.84□□□□□ -0.83
SF3A1-206ENST00000471037 POSTNQ15063 836 aa9.84□□□□□ -0.83
SF3A1-206ENST00000471037 SLC10A6Q3KNW5 377 aa9.84□□□□□ -0.83
SF3A1-206ENST00000471037 LAIR1Q6GTX8 287 aa9.84□□□□□ -0.83
SF3A1-206ENST00000471037 RINT1Q6NUQ1 792 aa9.84□□□□□ -0.83
SF3A1-206ENST00000471037 C1orf228Q6PIY5 440 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms