RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 RGS16O15492 202 aaPredicted RBP8.51□□□□□ -1.05
SMC4-212ENST00000470240 PSTPIP1O43586 416 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 FAM107AO95990 144 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 MYCP01106 439 aaPredicted RBP8.51□□□□□ -1.05
SMC4-212ENST00000470240 HLA-DRAP01903 254 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 ECHS1P30084 290 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 ADSSP30520 456 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 COILP38432 576 aaPredicted RBP8.51□□□□□ -1.05
SMC4-212ENST00000470240 PLTPP55058 493 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 POU5F1Q01860 360 aaKnown RBP8.51□□□□□ -1.05
SMC4-212ENST00000470240 CENPCQ03188 943 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 TAP1Q03518 808 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 BYSLQ13895 437 aaKnown RBP8.51□□□□□ -1.05
SMC4-212ENST00000470240 PTGISQ16647 500 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 ZACNQ401N2 412 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 SGO2Q562F6 1265 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 LCE2AQ5TA79 106 aaPredicted RBP8.51□□□□□ -1.05
SMC4-212ENST00000470240 ANGEL2Q5VTE6 544 aaKnown RBP8.51□□□□□ -1.05
SMC4-212ENST00000470240 DCAF12L1Q5VU92 463 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 KCNV1Q6PIU1 500 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 ABHD15Q6UXT9 468 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 TRMT10CQ7L0Y3 403 aaKnown RBP8.51□□□□□ -1.05
SMC4-212ENST00000470240 PALB2Q86YC2 1186 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 CCDC50Q8IVM0 306 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 CCDC60Q8IWA6 550 aaPredicted RBP8.51□□□□□ -1.05
SMC4-212ENST00000470240 OTUD6BQ8N6M0 293 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 REPS2Q8NFH8 660 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 PLEKHO2Q8TD55 490 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 ATP8B4Q8TF62 1192 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 PSPC1Q8WXF1 523 aaKnown RBP8.51□□□□□ -1.05
SMC4-212ENST00000470240 BSNDQ8WZ55 320 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 SEMA4DQ92854 862 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 KAT5Q92993 513 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 VCPIP1Q96JH7 1222 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 MTFR1LQ9H019 292 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 PORCNQ9H237 461 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 WHRNQ9P202 907 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 ANKFY1Q9P2R3 1169 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 ASIC3Q9UHC3 531 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 GGA2Q9UJY4 613 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 NOVA2Q9UNW9 492 aaKnown RBP8.51□□□□□ -1.05
SMC4-212ENST00000470240 SNX24Q9Y343 169 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 CSADQ9Y600 493 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 STYXL1Q9Y6J8 313 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 BRCA1P38398 1863 aaKnown RBP8.51□□□□□ -1.05
SMC4-212ENST00000470240 GRIN2DO15399 1336 aa8.51□□□□□ -1.05
SMC4-212ENST00000470240 LOC285556D6RIA3 1793 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 SIP14410 1827 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 GOLGA6L7A0A1B0GV03 622 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 GMNCA6NCL1 334 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 NFKBIEO00221 500 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 MEN1O00255 615 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 ZNF862O60290 1169 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 AGTP01019 485 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 CALB1P05937 261 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 TGFB3P10600 412 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 ATF2P15336 505 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 GNA15P30679 374 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 SSR1P43307 286 aaKnown RBP8.5□□□□□ -1.05
SMC4-212ENST00000470240 SCTRP47872 440 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 NOP14P78316 857 aaKnown RBP8.5□□□□□ -1.05
SMC4-212ENST00000470240 CLDN10P78369 228 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 IRX3P78415 501 aaPredicted RBP8.5□□□□□ -1.05
SMC4-212ENST00000470240 PTP4A2Q12974 167 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 GRM1Q13255 1194 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 CUL2Q13617 745 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 TFDP1Q14186 410 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 TMEM132BQ14DG7 1078 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 UAP1Q16222 522 aaPredicted RBP8.5□□□□□ -1.05
SMC4-212ENST00000470240 SKIDA1Q1XH10 827 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 TTC31Q49AM3 519 aaPredicted RBP8.5□□□□□ -1.05
SMC4-212ENST00000470240 ZFYVE27Q5T4F4 411 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 SLC39A4Q6P5W5 647 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 ZNF365Q70YC5 407 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 RNF135Q8IUD6 432 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 RHOT1Q8IXI2 618 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 MCOLN2Q8IZK6 566 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 ANKS4BQ8N8V4 417 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 PRELID2Q8N945 189 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 KRT35Q92764 455 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 P3H4Q92791 437 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 SLCO2A1Q92959 643 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 ZKSCAN4Q969J2 545 aaPredicted RBP8.5□□□□□ -1.05
SMC4-212ENST00000470240 C18orf8Q96DM3 657 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 PGM2Q96G03 612 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 SNF8Q96H20 258 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 RBM41Q96IZ5 413 aaKnown RBP8.5□□□□□ -1.05
SMC4-212ENST00000470240 CCDC114Q96M63 670 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 SCLT1Q96NL6 688 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 PCDHB18PQ96TA0 734 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 CCDC77Q9BR77 488 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 MRPL4Q9BYD3 311 aaKnown RBP8.5□□□□□ -1.05
SMC4-212ENST00000470240 NIFKQ9BYG3 293 aaKnown RBP8.5□□□□□ -1.05
SMC4-212ENST00000470240 FOXP3Q9BZS1 431 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 ROPN1BQ9BZX4 212 aaPredicted RBP8.5□□□□□ -1.05
SMC4-212ENST00000470240 C2orf40Q9H1Z8 148 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 LRRC19Q9H756 370 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 ROPN1Q9HAT0 212 aaPredicted RBP8.5□□□□□ -1.05
SMC4-212ENST00000470240 XPNPEP1Q9NQW7 623 aa8.5□□□□□ -1.05
SMC4-212ENST00000470240 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.5□□□□□ -1.052e-129■■■■■ 884.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms