RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 SYCE1LA8MT33 242 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 TMEM114B3SHH9 223 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 ANKRD65E5RJM6 399 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 GOLGA8NF8WBI6 632 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 STMND1H3BQB6 276 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 CAPN9O14815 690 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 FOXP2O15409 715 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 PRPF3O43395 683 aaKnown RBP5.43□□□□□ -1.54
COL3A1-205ENST00000470167 ADCY3O60266 1144 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 ARHGEF15O94989 841 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 LARGE1O95461 756 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 PLGP00747 810 aaPredicted RBP5.43□□□□□ -1.54
COL3A1-205ENST00000470167 KRT6AP02538 564 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 ALBP02768 609 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 KRT6BP04259 564 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 SNRPAP09012 282 aaKnown RBP5.43□□□□□ -1.54
COL3A1-205ENST00000470167 IFIT1P09914 478 aaKnown RBP5.43□□□□□ -1.54
COL3A1-205ENST00000470167 THEGLP0DJG4 465 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 ATF6P18850 670 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 GBP1P32455 592 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 SLC26A3P40879 764 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 HADHAP40939 763 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 STAT6P42226 847 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 FXR1P51114 621 aaKnown RBP eCLIP5.43□□□□□ -1.54
COL3A1-205ENST00000470167 MAP3K7CLP57077 242 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 UBE2IP63279 158 aaKnown RBP5.43□□□□□ -1.54
COL3A1-205ENST00000470167 CSNK2BP67870 215 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 MXRA7P84157 204 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 OTUD4Q01804 1114 aaKnown RBP5.43□□□□□ -1.54
COL3A1-205ENST00000470167 PPP2R3AQ06190 1150 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 EXOSC9Q06265 439 aaKnown RBP5.43□□□□□ -1.54
COL3A1-205ENST00000470167 ENPEPQ07075 957 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 APOBRQ0VD83 1088 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 TBL3Q12788 808 aaKnown RBP5.43□□□□□ -1.54
COL3A1-205ENST00000470167 IFIT5Q13325 482 aaKnown RBP5.43□□□□□ -1.54
COL3A1-205ENST00000470167 NCF4Q15080 339 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 PTPAQ15257 358 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 XKR3Q5GH77 459 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 CLVS2Q5SYC1 327 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 FAM182BQ5T319 152 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 BTBD8Q5XKL5 378 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 ZNF787Q6DD87 383 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 PRPF40BQ6NWY9 871 aaKnown RBP5.43□□□□□ -1.54
COL3A1-205ENST00000470167 DUS1LQ6P1R4 473 aaKnown RBP5.43□□□□□ -1.54
COL3A1-205ENST00000470167 CEP85Q6P2H3 762 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 ARHGAP11AQ6P4F7 1023 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 HHIPL2Q6UWX4 724 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 HFE2Q6ZVN8 426 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 RFPL4BQ6ZWI9 263 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 HS2ST1Q7LGA3 356 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 CLVS1Q8IUQ0 354 aaPredicted RBP5.43□□□□□ -1.54
COL3A1-205ENST00000470167 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.43□□□□□ -1.54
COL3A1-205ENST00000470167 SCUBE1Q8IWY4 988 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 VWA5B2Q8N398 1253 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 NAXEQ8NCW5 288 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 ZNF680Q8NEM1 530 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 SSH3Q8TE77 659 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 RNF139Q8WU17 664 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 RAPGEF5Q92565 580 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 HSPH1Q92598 858 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 GATA6Q92908 595 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 RMDN1Q96DB5 314 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 PPP1R10Q96QC0 940 aaKnown RBP5.43□□□□□ -1.54
COL3A1-205ENST00000470167 HHIPQ96QV1 700 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 YME1L1Q96TA2 773 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 OSMRQ99650 979 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 PHF20Q9BVI0 1012 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 NUP58Q9BVL2 599 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 MRPL1Q9BYD6 325 aaKnown RBP5.43□□□□□ -1.54
COL3A1-205ENST00000470167 ZNF341Q9BYN7 854 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 MIS12Q9H081 205 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 SNX25Q9H3E2 840 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 LRRC19Q9H756 370 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 LY9Q9HBG7 655 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 SLC38A10Q9HBR0 1119 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 TRPC7Q9HCX4 862 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 PLCB1Q9NQ66 1216 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 FAIMQ9NVQ4 179 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 ZIM2Q9NZV7 527 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 CHORDC1Q9UHD1 332 aaPredicted RBP5.43□□□□□ -1.54
COL3A1-205ENST00000470167 SOX13Q9UN79 622 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 AGAP1Q9UPQ3 857 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 DAGLAQ9Y4D2 1042 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 WDR7Q9Y4E6 1490 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 SRCAPQ6ZRS2 3230 aa5.43□□□□□ -1.54
COL3A1-205ENST00000470167 ZNF335Q9H4Z2 1342 aaPredicted RBP5.43□□□□□ -1.54
COL3A1-205ENST00000470167 PRDM15P57071 1507 aaPredicted RBP5.43□□□□□ -1.54
COL3A1-205ENST00000470167 RTL1A6NKG5 1358 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 PLEKHG1Q9ULL1 1385 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 CPSF1Q10570 1443 aaKnown RBP5.42□□□□□ -1.54
COL3A1-205ENST00000470167 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.42□□□□□ -1.54
COL3A1-205ENST00000470167 LOC100653049A0A140TA62 436 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 CCDC78A2IDD5 438 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 WDR91A4D1P6 747 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 SRRM3A6NNA2 597 aaPredicted RBP5.42□□□□□ -1.54
COL3A1-205ENST00000470167 METTL12A8MUP2 240 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 ZBTB42B2RXF5 422 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 B8ZZF3 427 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 HIP1O00291 1037 aa5.42□□□□□ -1.54
COL3A1-205ENST00000470167 HGSO14964 777 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms