RNA–Protein interactions for RNA: ENST00000469867.1

FAM228B-203, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 1 (best)

Gene FAM228B, Length 2,495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-203ENST00000469867 CACNA1IQ9P0X4 2223 aa12.6□□□□□ -0.39
FAM228B-203ENST00000469867 ABLIM1O14639 778 aa12.6□□□□□ -0.39
FAM228B-203ENST00000469867 GUCY2CP25092 1073 aa12.6□□□□□ -0.39
FAM228B-203ENST00000469867 STRN3Q13033 797 aa12.6□□□□□ -0.39
FAM228B-203ENST00000469867 MPZL3Q6UWV2 235 aa12.6□□□□□ -0.39
FAM228B-203ENST00000469867 TMEM130Q8N3G9 435 aa12.6□□□□□ -0.39
FAM228B-203ENST00000469867 SYT2Q8N9I0 419 aaPredicted RBP12.6□□□□□ -0.39
FAM228B-203ENST00000469867 HPS3Q969F9 1004 aa12.6□□□□□ -0.39
FAM228B-203ENST00000469867 RPP25Q9BUL9 199 aaKnown RBP12.6□□□□□ -0.39
FAM228B-203ENST00000469867 C17orf75Q9HAS0 396 aa12.6□□□□□ -0.39
FAM228B-203ENST00000469867 HCFC1R1Q9NWW0 138 aa12.6□□□□□ -0.39
FAM228B-203ENST00000469867 MEFVO15553 781 aaPredicted RBP12.6□□□□□ -0.39
FAM228B-203ENST00000469867 GALR2O43603 387 aaPredicted RBP12.6□□□□□ -0.39
FAM228B-203ENST00000469867 TRAPPC3O43617 180 aa12.6□□□□□ -0.39
FAM228B-203ENST00000469867 CAVIN2O95810 425 aa12.6□□□□□ -0.39
FAM228B-203ENST00000469867 C1RP00736 705 aa12.6□□□□□ -0.39
FAM228B-203ENST00000469867 PLA2G4BP0C869 781 aa12.6□□□□□ -0.39
FAM228B-203ENST00000469867 PLS3P13797 630 aa12.6□□□□□ -0.39
FAM228B-203ENST00000469867 NPR3P17342 541 aa12.6□□□□□ -0.39
FAM228B-203ENST00000469867 PROZP22891 400 aa12.6□□□□□ -0.39
FAM228B-203ENST00000469867 SMTNP53814 917 aa12.6□□□□□ -0.39
FAM228B-203ENST00000469867 SLC12A3P55017 1021 aa12.6□□□□□ -0.39
FAM228B-203ENST00000469867 FGF14Q92915 247 aa12.6□□□□□ -0.39
FAM228B-203ENST00000469867 DDX27Q96GQ7 796 aaKnown RBP12.6□□□□□ -0.39
FAM228B-203ENST00000469867 CCDC34Q96HJ3 373 aa12.6□□□□□ -0.39
FAM228B-203ENST00000469867 SNX27Q96L92 541 aa12.6□□□□□ -0.39
FAM228B-203ENST00000469867 NTPCRQ9BSD7 190 aaKnown RBP12.6□□□□□ -0.39
FAM228B-203ENST00000469867 CCSER1Q9C0I3 900 aa12.6□□□□□ -0.39
FAM228B-203ENST00000469867 MTRRQ9UBK8 725 aa12.6□□□□□ -0.39
FAM228B-203ENST00000469867 CA14Q9ULX7 337 aa12.6□□□□□ -0.39
FAM228B-203ENST00000469867 NUMBLQ9Y6R0 609 aa12.6□□□□□ -0.39
FAM228B-203ENST00000469867 GPR179Q6PRD1 2367 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 KRBA1A5PL33 1030 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 TMEM189-UBE2V1I3L0A0 370 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 TOM1L1O75674 476 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 SASH3O75995 380 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 MCF2P10911 925 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 H2AFXP16104 143 aaPredicted RBP12.59□□□□□ -0.39
FAM228B-203ENST00000469867 FSHRP23945 695 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 CLCN5P51795 746 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 SPAG1Q07617 926 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 RAB33AQ14088 237 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 ARSHQ5FYA8 562 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 HYIQ5T013 277 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 ELOA2Q8IYF1 753 aaPredicted RBP12.59□□□□□ -0.39
FAM228B-203ENST00000469867 FGF13Q92913 245 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 SAMSN1Q9NSI8 373 aaKnown RBP12.59□□□□□ -0.39
FAM228B-203ENST00000469867 IFNKQ9P0W0 207 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 CALCOCO1Q9P1Z2 691 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 HOOK1Q9UJC3 728 aaKnown RBP12.59□□□□□ -0.39
FAM228B-203ENST00000469867 NUB1Q9Y5A7 615 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 PODXLO00592 558 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 CLDN3O15551 220 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 PAPLNO95428 1278 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 MAPTP10636 758 aaKnown RBP12.59□□□□□ -0.39
FAM228B-203ENST00000469867 AOC1P19801 751 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 TXLNAP40222 546 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 MATR3P43243 847 aaKnown RBP eCLIP12.59□□□□□ -0.39
FAM228B-203ENST00000469867 ARPP19P56211 112 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 XKR4Q5GH76 650 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 PDXDC1Q6P996 788 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 PARM1Q6UWI2 310 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 ANKS3Q6ZW76 656 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 ITFG1Q8TB96 612 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 GPR152Q8TDT2 470 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 UROC1Q96N76 676 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 BPIFA3Q9BQP9 254 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 XPO4Q9C0E2 1151 aaKnown RBP12.59□□□□□ -0.39
FAM228B-203ENST00000469867 BLOC1S4Q9NUP1 217 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 SLC38A7Q9NVC3 462 aa12.59□□□□□ -0.39
FAM228B-203ENST00000469867 HNRNPA1P09651 372 aaKnown RBP eCLIP12.58□□□□□ -0.4
FAM228B-203ENST00000469867 CXCL8P10145 99 aa12.58□□□□□ -0.4
FAM228B-203ENST00000469867 SRFP11831 508 aa12.58□□□□□ -0.4
FAM228B-203ENST00000469867 MYL5Q02045 173 aa12.58□□□□□ -0.4
FAM228B-203ENST00000469867 HTR4Q13639 388 aa12.58□□□□□ -0.4
FAM228B-203ENST00000469867 SLC10A6Q3KNW5 377 aa12.58□□□□□ -0.4
FAM228B-203ENST00000469867 VARS2Q5ST30 1063 aaKnown RBP12.58□□□□□ -0.4
FAM228B-203ENST00000469867 SPIRE2Q8WWL2 714 aa12.58□□□□□ -0.4
FAM228B-203ENST00000469867 ING5Q8WYH8 240 aa12.58□□□□□ -0.4
FAM228B-203ENST00000469867 BICD1Q96G01 975 aa12.58□□□□□ -0.4
FAM228B-203ENST00000469867 EEF2KMTQ96G04 330 aa12.58□□□□□ -0.4
FAM228B-203ENST00000469867 KBTBD4Q9NVX7 518 aa12.58□□□□□ -0.4
FAM228B-203ENST00000469867 CNTN3Q9P232 1028 aa12.58□□□□□ -0.4
FAM228B-203ENST00000469867 LARSQ9P2J5 1176 aaKnown RBP12.58□□□□□ -0.4
FAM228B-203ENST00000469867 PPP1R3GB7ZBB8 358 aa12.57□□□□□ -0.4
FAM228B-203ENST00000469867 GFRA3O60609 400 aa12.57□□□□□ -0.4
FAM228B-203ENST00000469867 XYLBO75191 536 aa12.57□□□□□ -0.4
FAM228B-203ENST00000469867 KCNE1P15382 129 aa12.57□□□□□ -0.4
FAM228B-203ENST00000469867 ROR1Q01973 937 aa12.57□□□□□ -0.4
FAM228B-203ENST00000469867 MCM6Q14566 821 aa12.57□□□□□ -0.4
FAM228B-203ENST00000469867 ARMCX5Q6P1M9 558 aa12.57□□□□□ -0.4
FAM228B-203ENST00000469867 SARM1Q6SZW1 724 aa12.57□□□□□ -0.4
FAM228B-203ENST00000469867 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.57□□□□□ -0.4
FAM228B-203ENST00000469867 C10orf67Q8IYJ2 551 aa12.57□□□□□ -0.4
FAM228B-203ENST00000469867 PPP1R13BQ96KQ4 1090 aa12.57□□□□□ -0.4
FAM228B-203ENST00000469867 REEP2Q9BRK0 252 aa12.57□□□□□ -0.4
FAM228B-203ENST00000469867 TIPINQ9BVW5 301 aa12.57□□□□□ -0.4
FAM228B-203ENST00000469867 HAPLN2Q9GZV7 340 aa12.57□□□□□ -0.4
FAM228B-203ENST00000469867 WNT16Q9UBV4 365 aa12.57□□□□□ -0.4
FAM228B-203ENST00000469867 NFE2L3Q9Y4A8 694 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms