RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 IL31Q6EBC2 164 aa16.53■□□□□ 0.24
BRAT1-204ENST00000469750 JAMLQ86YT9 394 aa16.53■□□□□ 0.24
BRAT1-204ENST00000469750 AGR3Q8TD06 166 aa16.53■□□□□ 0.24
BRAT1-204ENST00000469750 KAZALD1Q96I82 304 aa16.53■□□□□ 0.24
BRAT1-204ENST00000469750 PPCSQ9HAB8 311 aa16.53■□□□□ 0.24
BRAT1-204ENST00000469750 CYP4F11Q9HBI6 524 aa16.53■□□□□ 0.24
BRAT1-204ENST00000469750 RBM12Q9NTZ6 932 aaKnown RBP16.53■□□□□ 0.24
BRAT1-204ENST00000469750 UBQLN1Q9UMX0 589 aaKnown RBP16.53■□□□□ 0.24
BRAT1-204ENST00000469750 LRRIQ1Q96JM4 1722 aa16.53■□□□□ 0.24
BRAT1-204ENST00000469750 RNF103-CHMP3A0A140T963 221 aa16.53■□□□□ 0.24
BRAT1-204ENST00000469750 SMAPO00193 183 aa16.53■□□□□ 0.24
BRAT1-204ENST00000469750 RAB42Q8N4Z0 105 aa16.53■□□□□ 0.24
BRAT1-204ENST00000469750 SPATA18Q8TC71 538 aa16.53■□□□□ 0.24
BRAT1-204ENST00000469750 ING2Q9H160 280 aa16.53■□□□□ 0.24
BRAT1-204ENST00000469750 ALG13Q9NP73 1137 aaKnown RBP16.53■□□□□ 0.24
BRAT1-204ENST00000469750 DIP2BQ9P265 1576 aa16.52■□□□□ 0.24
BRAT1-204ENST00000469750 EEF1DP29692 281 aaKnown RBP16.52■□□□□ 0.24
BRAT1-204ENST00000469750 COL23A1Q86Y22 540 aaPredicted RBP16.52■□□□□ 0.24
BRAT1-204ENST00000469750 RTFDC1Q9BY42 306 aaPredicted RBP16.52■□□□□ 0.24
BRAT1-204ENST00000469750 EHD4Q9H223 541 aa16.52■□□□□ 0.24
BRAT1-204ENST00000469750 ECT2Q9H8V3 914 aa16.52■□□□□ 0.24
BRAT1-204ENST00000469750 VIPAS39Q9H9C1 493 aa16.52■□□□□ 0.24
BRAT1-204ENST00000469750 ARHGEF38Q9NXL2 777 aa16.52■□□□□ 0.24
BRAT1-204ENST00000469750 PSMC3IPQ9P2W1 217 aaPredicted RBP16.52■□□□□ 0.24
BRAT1-204ENST00000469750 TLR2O60603 784 aa16.52■□□□□ 0.24
BRAT1-204ENST00000469750 ITGB3P05106 788 aa16.52■□□□□ 0.24
BRAT1-204ENST00000469750 FGFR2P21802 821 aa16.52■□□□□ 0.24
BRAT1-204ENST00000469750 SREBF1P36956 1147 aa16.52■□□□□ 0.24
BRAT1-204ENST00000469750 PDAP1Q13442 181 aaKnown RBP16.52■□□□□ 0.24
BRAT1-204ENST00000469750 PTPAQ15257 358 aa16.52■□□□□ 0.24
BRAT1-204ENST00000469750 TRADDQ15628 312 aa16.52■□□□□ 0.24
BRAT1-204ENST00000469750 DDX53Q86TM3 631 aaKnown RBP16.52■□□□□ 0.24
BRAT1-204ENST00000469750 SAMD3Q8N6K7 520 aa16.52■□□□□ 0.24
BRAT1-204ENST00000469750 PTPRN2Q92932 1015 aa16.52■□□□□ 0.24
BRAT1-204ENST00000469750 MTBPQ96DY7 904 aa16.52■□□□□ 0.24
BRAT1-204ENST00000469750 PCDHGB4Q9UN71 923 aa16.52■□□□□ 0.24
BRAT1-204ENST00000469750 CST8O60676 142 aa16.52■□□□□ 0.23
BRAT1-204ENST00000469750 AP2B1P63010 937 aa16.52■□□□□ 0.23
BRAT1-204ENST00000469750 LZICQ8WZA0 190 aa16.52■□□□□ 0.23
BRAT1-204ENST00000469750 ANKS1AQ92625 1134 aa16.52■□□□□ 0.23
BRAT1-204ENST00000469750 C17orf102A2RUQ5 167 aa16.52■□□□□ 0.23
BRAT1-204ENST00000469750 BACE1P56817 501 aa16.52■□□□□ 0.23
BRAT1-204ENST00000469750 GUCY1A3Q02108 690 aa16.52■□□□□ 0.23
BRAT1-204ENST00000469750 EPC2Q52LR7 807 aa16.52■□□□□ 0.23
BRAT1-204ENST00000469750 CCNI2Q6ZMN8 369 aaPredicted RBP16.52■□□□□ 0.23
BRAT1-204ENST00000469750 TEX12Q9BXU0 123 aa16.52■□□□□ 0.23
BRAT1-204ENST00000469750 GPBP1L1Q9HC44 474 aaPredicted RBP16.52■□□□□ 0.23
BRAT1-204ENST00000469750 SLC30A1Q9Y6M5 507 aa16.52■□□□□ 0.23
BRAT1-204ENST00000469750 MED24O75448 989 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 SPAG6O75602 509 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 HIST1H2AGP0C0S8 130 aaPredicted RBP16.51■□□□□ 0.23
BRAT1-204ENST00000469750 FAM200BP0CF97 657 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 HIST1H2ADP20671 130 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 KLRC1P26715 233 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 ZNF200P98182 395 aaPredicted RBP16.51■□□□□ 0.23
BRAT1-204ENST00000469750 CENPCQ03188 943 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 CUL2Q13617 745 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 KCNB2Q92953 911 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 GMCL1Q96IK5 515 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 HIST1H2AHQ96KK5 128 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 SPATA17Q96L03 361 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 GLT1D1Q96MS3 346 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 HIST1H2AJQ99878 128 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 H2AFJQ9BTM1 129 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 MUC3BQ9H195 1237 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 METTL5Q9NRN9 209 aaKnown RBP16.51■□□□□ 0.23
BRAT1-204ENST00000469750 OGTO15294 1046 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 RBP3P10745 1247 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 MCF2P10911 925 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 GJB7Q6PEY0 223 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 SPATA21Q7Z572 469 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 USP10Q14694 798 aaKnown RBP16.51■□□□□ 0.23
BRAT1-204ENST00000469750 SKIV2LQ15477 1246 aaKnown RBP16.51■□□□□ 0.23
BRAT1-204ENST00000469750 RNF180Q86T96 592 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 ERO1BQ86YB8 467 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 MFN1Q8IWA4 741 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 GTF3C4Q9UKN8 822 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 TCP11X1B4DZS4 312 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 NDUFS3O75489 264 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 PPP1R37O75864 691 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 MMP14P50281 582 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 LONRF1Q17RB8 773 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 ZNF484Q5JVG2 852 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 TSSK1BQ9BXA7 367 aa16.51■□□□□ 0.23
BRAT1-204ENST00000469750 CFAP73A6NFT4 308 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 ASMTLO95671 621 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 CYP2C8P10632 490 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 DDX5P17844 614 aaKnown RBP16.5■□□□□ 0.23
BRAT1-204ENST00000469750 FCGRTP55899 365 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 GTF2H3Q13889 308 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 FAM117BQ6P1L5 589 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 KIRREL3Q8IZU9 778 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 NAGPAQ9UK23 515 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 CHMP2BQ9UQN3 213 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 CEP170BQ9Y4F5 1589 aaPredicted RBP16.5■□□□□ 0.23
BRAT1-204ENST00000469750 UBE2Q2LH0YL09 131 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 RAD51CO43502 376 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 HMOX2P30519 316 aa16.5■□□□□ 0.23
BRAT1-204ENST00000469750 CDR2LQ86X02 465 aaPredicted RBP16.5■□□□□ 0.23
BRAT1-204ENST00000469750 GMCL1P1Q8NEA9 526 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms