RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 CCL15-CCL14A0A0B4J2E2 113 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 GPAA1O43292 621 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 KDM1AO60341 852 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 IGHDP01880 384 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 PDGFRBP09619 1106 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 COL6A1P12109 1028 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 LINC00310P59036 64 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 IRX3P78415 501 aaPredicted RBP7.28□□□□□ -1.24
PTCD3-208ENST00000469585 IL13RA1P78552 427 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 EXOSC10Q01780 885 aaKnown RBP7.28□□□□□ -1.24
PTCD3-208ENST00000469585 ROM1Q03395 351 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 KCNA10Q16322 511 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 CCL15Q16663 113 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 ABCB5Q2M3G0 1257 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 SLC4A8Q2Y0W8 1093 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 MCMDC2Q4G0Z9 681 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 KANK2Q63ZY3 851 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 SLFN12LQ6IEE8 588 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 GADL1Q6ZQY3 521 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 CMIPQ8IY22 773 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 DNAJC5GQ8N7S2 189 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 CALML6Q8TD86 181 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 SMCR8Q8TEV9 937 aaPredicted RBP7.28□□□□□ -1.24
PTCD3-208ENST00000469585 SDR42E1Q8WUS8 393 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 ZKSCAN4Q969J2 545 aaPredicted RBP7.28□□□□□ -1.24
PTCD3-208ENST00000469585 DACT3Q96B18 629 aaPredicted RBP7.28□□□□□ -1.24
PTCD3-208ENST00000469585 EDC3Q96F86 508 aaKnown RBP7.28□□□□□ -1.24
PTCD3-208ENST00000469585 AHCYL2Q96HN2 611 aaKnown RBP7.28□□□□□ -1.24
PTCD3-208ENST00000469585 CCDC17Q96LX7 622 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 PARK7Q99497 189 aaKnown RBP7.28□□□□□ -1.24
PTCD3-208ENST00000469585 MYL10Q9BUA6 226 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 MENTQ9BUN1 341 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 ASPSCR1Q9BZE9 553 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 OR10A5Q9H207 317 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 RNF41Q9H4P4 317 aaPredicted RBP7.28□□□□□ -1.24
PTCD3-208ENST00000469585 ZCCHC17Q9NP64 241 aaKnown RBP7.28□□□□□ -1.24
PTCD3-208ENST00000469585 DDX4Q9NQI0 724 aaKnown RBP7.28□□□□□ -1.24
PTCD3-208ENST00000469585 CROTQ9UKG9 612 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 ISY1Q9ULR0 285 aaKnown RBP7.28□□□□□ -1.24
PTCD3-208ENST00000469585 ZHX2Q9Y6X8 837 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 DOCK2Q92608 1830 aa7.28□□□□□ -1.24
PTCD3-208ENST00000469585 AKAP11Q9UKA4 1901 aa7.27□□□□□ -1.25
PTCD3-208ENST00000469585 DDTLA6NHG4 134 aaPredicted RBP7.27□□□□□ -1.25
PTCD3-208ENST00000469585 TRIM75PA6NK02 468 aa7.27□□□□□ -1.25
PTCD3-208ENST00000469585 C19orf81C9J6K1 198 aa7.27□□□□□ -1.25
PTCD3-208ENST00000469585 CXCL11O14625 94 aa7.27□□□□□ -1.25
PTCD3-208ENST00000469585 PRPF6O94906 941 aaKnown RBP7.27□□□□□ -1.25
PTCD3-208ENST00000469585 NT5C2P49902 561 aa7.27□□□□□ -1.25
PTCD3-208ENST00000469585 MLLT6P55198 1093 aaPredicted RBP7.27□□□□□ -1.25
PTCD3-208ENST00000469585 ITKQ08881 620 aa7.27□□□□□ -1.25
PTCD3-208ENST00000469585 TRDNQ13061 729 aa7.27□□□□□ -1.25
PTCD3-208ENST00000469585 INAVAQ3KP66 663 aa7.27□□□□□ -1.25
PTCD3-208ENST00000469585 DLK2Q6UY11 383 aa7.27□□□□□ -1.25
PTCD3-208ENST00000469585 ESPNLQ6ZVH7 1005 aa7.27□□□□□ -1.25
PTCD3-208ENST00000469585 TMEM179Q6ZVK1 233 aa7.27□□□□□ -1.25
PTCD3-208ENST00000469585 CXorf67Q86X51 503 aaPredicted RBP7.27□□□□□ -1.25
PTCD3-208ENST00000469585 CBARPQ8N350 705 aaPredicted RBP7.27□□□□□ -1.25
PTCD3-208ENST00000469585 LCORLQ8N3X6 602 aa7.27□□□□□ -1.25
PTCD3-208ENST00000469585 LMBR1Q8WVP7 490 aa7.27□□□□□ -1.25
PTCD3-208ENST00000469585 ERO1AQ96HE7 468 aa7.27□□□□□ -1.25
PTCD3-208ENST00000469585 CLMNQ96JQ2 1002 aa7.27□□□□□ -1.25
PTCD3-208ENST00000469585 C14orf119Q9NWQ9 140 aa7.27□□□□□ -1.25
PTCD3-208ENST00000469585 TRHDEQ9UKU6 1024 aa7.27□□□□□ -1.25
PTCD3-208ENST00000469585 MYH7P12883 1935 aa7.27□□□□□ -1.25
PTCD3-208ENST00000469585 RAD50Q92878 1312 aa7.27□□□□□ -1.25
PTCD3-208ENST00000469585 RFXAPO00287 272 aa7.26□□□□□ -1.25
PTCD3-208ENST00000469585 MAFO75444 373 aaPredicted RBP7.26□□□□□ -1.25
PTCD3-208ENST00000469585 CYP7B1O75881 506 aa7.26□□□□□ -1.25
PTCD3-208ENST00000469585 FBXO21O94952 628 aa7.26□□□□□ -1.25
PTCD3-208ENST00000469585 KNG1P01042 644 aa7.26□□□□□ -1.25
PTCD3-208ENST00000469585 CHGBP05060 677 aa7.26□□□□□ -1.25
PTCD3-208ENST00000469585 TSPY3P0CV98 308 aa7.26□□□□□ -1.25
PTCD3-208ENST00000469585 TSPY8P0CW00 308 aa7.26□□□□□ -1.25
PTCD3-208ENST00000469585 PCP11498 1178 aaKnown RBP7.26□□□□□ -1.25
PTCD3-208ENST00000469585 ZNF28P17035 718 aa7.26□□□□□ -1.25
PTCD3-208ENST00000469585 HOXD10P28358 340 aa7.26□□□□□ -1.25
PTCD3-208ENST00000469585 RAP1GAPP47736 663 aa7.26□□□□□ -1.25
PTCD3-208ENST00000469585 TM4SF4P48230 202 aa7.26□□□□□ -1.25
PTCD3-208ENST00000469585 IMMTQ16891 758 aaKnown RBP7.26□□□□□ -1.25
PTCD3-208ENST00000469585 ZNF385BQ569K4 471 aa7.26□□□□□ -1.25
PTCD3-208ENST00000469585 ZBTB41Q5SVQ8 909 aa7.26□□□□□ -1.25
PTCD3-208ENST00000469585 TTC22Q5TAA0 569 aa7.26□□□□□ -1.25
PTCD3-208ENST00000469585 SYDE2Q5VT97 1194 aa7.26□□□□□ -1.25
PTCD3-208ENST00000469585 PRAMEF9Q5VWM5 478 aa7.26□□□□□ -1.25
PTCD3-208ENST00000469585 CWC27Q6UX04 472 aaKnown RBP7.26□□□□□ -1.25
PTCD3-208ENST00000469585 UNQ6494/PRO21346Q6UXR6 183 aa7.26□□□□□ -1.25
PTCD3-208ENST00000469585 CXXC5Q7LFL8 322 aaKnown RBP7.26□□□□□ -1.25
PTCD3-208ENST00000469585 ADGRA1Q86SQ6 560 aa7.26□□□□□ -1.25
PTCD3-208ENST00000469585 ZCCHC14Q8WYQ9 949 aaKnown RBP7.26□□□□□ -1.25
PTCD3-208ENST00000469585 STRBPQ96SI9 672 aaKnown RBP7.26□□□□□ -1.25
PTCD3-208ENST00000469585 RIOK1Q9BRS2 568 aaKnown RBP7.26□□□□□ -1.25
PTCD3-208ENST00000469585 ZNF112Q9UJU3 913 aa7.26□□□□□ -1.25
PTCD3-208ENST00000469585 FZD1Q9UP38 647 aa7.26□□□□□ -1.25
PTCD3-208ENST00000469585 CCDC171Q6TFL3 1326 aa7.26□□□□□ -1.25
PTCD3-208ENST00000469585 ERICH2A1L162 156 aa7.25□□□□□ -1.25
PTCD3-208ENST00000469585 SH3D21A4FU49 640 aa7.25□□□□□ -1.25
PTCD3-208ENST00000469585 TSPY2A6NKD2 308 aa7.25□□□□□ -1.25
PTCD3-208ENST00000469585 NPIPB6E9PJ23 425 aa7.25□□□□□ -1.25
PTCD3-208ENST00000469585 GABRDO14764 452 aa7.25□□□□□ -1.25
PTCD3-208ENST00000469585 ZNF213O14771 459 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms