RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 ZNF252P-AS1Q0IIN9 211 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 PDIA2Q13087 525 aaKnown RBP12.78□□□□□ -0.36
VARS2-205ENST00000469358 STAT4Q14765 748 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 DLGAP5Q15398 846 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 KCNT1Q5JUK3 1230 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 RNF43Q68DV7 783 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 GBP7Q8N8V2 638 aaPredicted RBP12.78□□□□□ -0.36
VARS2-205ENST00000469358 SUPT20HQ8NEM7 779 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 FNBP1Q96RU3 617 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 CCDC77Q9BR77 488 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 SEPT9Q9UHD8 586 aaPredicted RBP12.78□□□□□ -0.36
VARS2-205ENST00000469358 NUB1Q9Y5A7 615 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 LIASO43766 372 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 CYP1A1P04798 512 aaPredicted RBP12.78□□□□□ -0.36
VARS2-205ENST00000469358 ACO1P21399 889 aaKnown RBP12.78□□□□□ -0.36
VARS2-205ENST00000469358 ADRA1DP25100 572 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 POLGP54098 1239 aaPredicted RBP12.78□□□□□ -0.36
VARS2-205ENST00000469358 SESN3P58005 492 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 CENPCQ03188 943 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 WDR72Q3MJ13 1102 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 MTERF2Q49AM1 385 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 MSS51Q4VC12 460 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 CYP4A22Q5TCH4 519 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 ANKRD22Q5VYY1 191 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 NLRX1Q86UT6 975 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 LONP2Q86WA8 852 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 ZCCHC9Q8N567 271 aaKnown RBP12.78□□□□□ -0.36
VARS2-205ENST00000469358 FAM13CQ8NE31 585 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 DENND1AQ8TEH3 1009 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 FBF1Q8TES7 1133 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 MCEEQ96PE7 176 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 UBN1Q9NPG3 1134 aa12.78□□□□□ -0.36
VARS2-205ENST00000469358 WDR64B1ANS9 1081 aa12.77□□□□□ -0.36
VARS2-205ENST00000469358 NPM3O75607 178 aaKnown RBP12.77□□□□□ -0.36
VARS2-205ENST00000469358 KRT4P19013 534 aa12.77□□□□□ -0.36
VARS2-205ENST00000469358 CCNHP51946 323 aaPredicted RBP12.77□□□□□ -0.36
VARS2-205ENST00000469358 GDF10P55107 478 aa12.77□□□□□ -0.36
VARS2-205ENST00000469358 GCNT1Q02742 428 aa12.77□□□□□ -0.36
VARS2-205ENST00000469358 TAF11Q15544 211 aa12.77□□□□□ -0.36
VARS2-205ENST00000469358 MAPK6Q16659 721 aa12.77□□□□□ -0.36
VARS2-205ENST00000469358 TAF1BQ53T94 588 aaPredicted RBP12.77□□□□□ -0.36
VARS2-205ENST00000469358 RFWD3Q6PCD5 774 aa12.77□□□□□ -0.36
VARS2-205ENST00000469358 LVRNQ6Q4G3 990 aa12.77□□□□□ -0.36
VARS2-205ENST00000469358 PPP1R21Q6ZMI0 780 aa12.77□□□□□ -0.36
VARS2-205ENST00000469358 FBXL18Q96ME1 805 aa12.77□□□□□ -0.36
VARS2-205ENST00000469358 TBC1D10AQ9BXI6 508 aa12.77□□□□□ -0.36
VARS2-205ENST00000469358 ST6GALNAC4Q9H4F1 302 aa12.77□□□□□ -0.36
VARS2-205ENST00000469358 FZD1Q9UP38 647 aa12.77□□□□□ -0.36
VARS2-205ENST00000469358 H0YIN7 160 aa12.77□□□□□ -0.37
VARS2-205ENST00000469358 SGK1O00141 431 aa12.77□□□□□ -0.37
VARS2-205ENST00000469358 ITGBL1O95965 494 aaPredicted RBP12.77□□□□□ -0.37
VARS2-205ENST00000469358 EDN1P05305 212 aa12.77□□□□□ -0.37
VARS2-205ENST00000469358 PDHA1P08559 390 aa12.77□□□□□ -0.37
VARS2-205ENST00000469358 TRAF1Q13077 416 aa12.77□□□□□ -0.37
VARS2-205ENST00000469358 TFDP1Q14186 410 aa12.77□□□□□ -0.37
VARS2-205ENST00000469358 WDR44Q5JSH3 913 aa12.77□□□□□ -0.37
VARS2-205ENST00000469358 SLC27A3Q5K4L6 730 aa12.77□□□□□ -0.37
VARS2-205ENST00000469358 NAIF1Q69YI7 327 aaPredicted RBP12.77□□□□□ -0.37
VARS2-205ENST00000469358 OTOAQ7RTW8 1153 aa12.77□□□□□ -0.37
VARS2-205ENST00000469358 FAM160B2Q86V87 743 aa12.77□□□□□ -0.37
VARS2-205ENST00000469358 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.77□□□□□ -0.37
VARS2-205ENST00000469358 TMC2Q8TDI7 906 aa12.77□□□□□ -0.37
VARS2-205ENST00000469358 SLC7A6OSQ96CW6 309 aaPredicted RBP12.77□□□□□ -0.37
VARS2-205ENST00000469358 PDCD2LQ9BRP1 358 aa12.77□□□□□ -0.37
VARS2-205ENST00000469358 TRIM6Q9C030 488 aaPredicted RBP12.77□□□□□ -0.37
VARS2-205ENST00000469358 AVENQ9NQS1 362 aaPredicted RBP12.77□□□□□ -0.37
VARS2-205ENST00000469358 TJP2Q9UDY2 1190 aa12.77□□□□□ -0.37
VARS2-205ENST00000469358 LRRD1A4D1F6 860 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 TTLL13PA6NNM8 815 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 MAPK13O15264 365 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 TCEA3O75764 348 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 SLC1A1P43005 524 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 LIG4P49917 911 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 MOGSQ13724 837 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 SETDB1Q15047 1291 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 ARHGEF16Q5VV41 709 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 MTDHQ86UE4 582 aaKnown RBP12.76□□□□□ -0.37
VARS2-205ENST00000469358 RBBP8NLQ8NC74 664 aaPredicted RBP12.76□□□□□ -0.37
VARS2-205ENST00000469358 RFWD2Q8NHY2 731 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 LRRC8CQ8TDW0 803 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 FAM151AQ8WW52 585 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 IWS1Q96ST2 819 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 POLR3FQ9H1D9 316 aaPredicted RBP12.76□□□□□ -0.37
VARS2-205ENST00000469358 SLC17A7Q9P2U7 560 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 COL11A2P13942 1736 aaPredicted RBP12.76□□□□□ -0.37
VARS2-205ENST00000469358 TCRBV7S3A2A0A539 114 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 PMM2O15305 246 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 PEX11AO75192 247 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 YY1P25490 414 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 RAD23BP54727 409 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 GPX6P59796 221 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 BAATQ14032 418 aaPredicted RBP12.76□□□□□ -0.37
VARS2-205ENST00000469358 SYDE1Q6ZW31 735 aaPredicted RBP12.76□□□□□ -0.37
VARS2-205ENST00000469358 CCDC60Q8IWA6 550 aaPredicted RBP12.76□□□□□ -0.37
VARS2-205ENST00000469358 ABRAQ8N0Z2 381 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 CCHCR1Q8TD31 782 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 ZNF526Q8TF50 670 aaPredicted RBP12.76□□□□□ -0.37
VARS2-205ENST00000469358 SLITRK1Q96PX8 696 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 SMC6Q96SB8 1091 aa12.76□□□□□ -0.37
VARS2-205ENST00000469358 TBC1D22BQ9NU19 505 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms