RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 ANKRD63C9JTQ0 380 aa13.33□□□□□ -0.28
HDAC3-204ENST00000469207 GJB2P29033 226 aa13.33□□□□□ -0.28
HDAC3-204ENST00000469207 AARSP49588 968 aaKnown RBP eCLIP13.33□□□□□ -0.28
HDAC3-204ENST00000469207 LIG4P49917 911 aa13.33□□□□□ -0.28
HDAC3-204ENST00000469207 LILRA4P59901 499 aa13.33□□□□□ -0.28
HDAC3-204ENST00000469207 PPP2R3AQ06190 1150 aa13.33□□□□□ -0.28
HDAC3-204ENST00000469207 SRSF5Q13243 272 aaKnown RBP13.33□□□□□ -0.28
HDAC3-204ENST00000469207 GPR17Q13304 367 aa13.33□□□□□ -0.28
HDAC3-204ENST00000469207 MCM6Q14566 821 aa13.33□□□□□ -0.28
HDAC3-204ENST00000469207 RILPL1Q5EBL4 403 aa13.33□□□□□ -0.28
HDAC3-204ENST00000469207 OVOS1Q6IE37 1185 aa13.33□□□□□ -0.28
HDAC3-204ENST00000469207 JADE1Q6IE81 842 aa13.33□□□□□ -0.28
HDAC3-204ENST00000469207 TXNDC11Q6PKC3 985 aa13.33□□□□□ -0.28
HDAC3-204ENST00000469207 DNAJB7Q7Z6W7 309 aaPredicted RBP13.33□□□□□ -0.28
HDAC3-204ENST00000469207 ARID3BQ8IVW6 561 aaPredicted RBP13.33□□□□□ -0.28
HDAC3-204ENST00000469207 MYCT1Q8N699 235 aa13.33□□□□□ -0.28
HDAC3-204ENST00000469207 CDK5RAP3Q96JB5 506 aa13.33□□□□□ -0.28
HDAC3-204ENST00000469207 SENP8Q96LD8 212 aa13.33□□□□□ -0.28
HDAC3-204ENST00000469207 ZHX3Q9H4I2 956 aa13.33□□□□□ -0.28
HDAC3-204ENST00000469207 RPF1Q9H9Y2 349 aaKnown RBP13.33□□□□□ -0.28
HDAC3-204ENST00000469207 TRPV4Q9HBA0 871 aa13.33□□□□□ -0.28
HDAC3-204ENST00000469207 BLOC1S4Q9NUP1 217 aa13.33□□□□□ -0.28
HDAC3-204ENST00000469207 USP18Q9UMW8 372 aa13.33□□□□□ -0.28
HDAC3-204ENST00000469207 COL4A2P08572 1712 aa13.33□□□□□ -0.28
HDAC3-204ENST00000469207 CACNA1AO00555 2505 aa13.33□□□□□ -0.28
HDAC3-204ENST00000469207 CEP250Q9BV73 2442 aa13.32□□□□□ -0.28
HDAC3-204ENST00000469207 HRO43593 1189 aa13.32□□□□□ -0.28
HDAC3-204ENST00000469207 EIF5BO60841 1220 aaKnown RBP13.32□□□□□ -0.28
HDAC3-204ENST00000469207 NFICP08651 508 aa13.32□□□□□ -0.28
HDAC3-204ENST00000469207 CYP3A5P20815 502 aa13.32□□□□□ -0.28
HDAC3-204ENST00000469207 NMT1P30419 496 aaKnown RBP13.32□□□□□ -0.28
HDAC3-204ENST00000469207 ACOT2P49753 483 aa13.32□□□□□ -0.28
HDAC3-204ENST00000469207 SPEM2Q0P670 501 aa13.32□□□□□ -0.28
HDAC3-204ENST00000469207 ZC2HC1CQ53FD0 456 aaPredicted RBP13.32□□□□□ -0.28
HDAC3-204ENST00000469207 SPATA1Q5VX52 437 aa13.32□□□□□ -0.28
HDAC3-204ENST00000469207 SCARA3Q6AZY7 606 aa13.32□□□□□ -0.28
HDAC3-204ENST00000469207 GPBP1Q86WP2 473 aa13.32□□□□□ -0.28
HDAC3-204ENST00000469207 OR10T2Q8NGX3 314 aa13.32□□□□□ -0.28
HDAC3-204ENST00000469207 DEPDC1BQ8WUY9 529 aa13.32□□□□□ -0.28
HDAC3-204ENST00000469207 LPIN3Q9BQK8 851 aa13.32□□□□□ -0.28
HDAC3-204ENST00000469207 SMG9Q9H0W8 520 aaKnown RBP13.32□□□□□ -0.28
HDAC3-204ENST00000469207 ATXN3LQ9H3M9 355 aa13.32□□□□□ -0.28
HDAC3-204ENST00000469207 TRPV5Q9NQA5 729 aa13.32□□□□□ -0.28
HDAC3-204ENST00000469207 GTSE1Q9NYZ3 720 aa13.32□□□□□ -0.28
HDAC3-204ENST00000469207 LARSQ9P2J5 1176 aaKnown RBP13.32□□□□□ -0.28
HDAC3-204ENST00000469207 KCNG1Q9UIX4 513 aa13.32□□□□□ -0.28
HDAC3-204ENST00000469207 MAFFQ9ULX9 164 aa13.32□□□□□ -0.28
HDAC3-204ENST00000469207 A0A0B4J269 797 aa13.31□□□□□ -0.28
HDAC3-204ENST00000469207 CHURC1-FNTBB4DL54 471 aa13.31□□□□□ -0.28
HDAC3-204ENST00000469207 K7ENM7 598 aa13.31□□□□□ -0.28
HDAC3-204ENST00000469207 HNRNPDLO14979 420 aaKnown RBP13.31□□□□□ -0.28
HDAC3-204ENST00000469207 OGTO15294 1046 aa13.31□□□□□ -0.28
HDAC3-204ENST00000469207 TRAK2O60296 914 aa13.31□□□□□ -0.28
HDAC3-204ENST00000469207 ADRB2P07550 413 aa13.31□□□□□ -0.28
HDAC3-204ENST00000469207 GABRR2P28476 465 aa13.31□□□□□ -0.28
HDAC3-204ENST00000469207 ALDH1A3P47895 512 aa13.31□□□□□ -0.28
HDAC3-204ENST00000469207 CXCL12P48061 93 aa13.31□□□□□ -0.28
HDAC3-204ENST00000469207 FNTBP49356 437 aa13.31□□□□□ -0.28
HDAC3-204ENST00000469207 KPNA1P52294 538 aaPredicted RBP13.31□□□□□ -0.28
HDAC3-204ENST00000469207 EPHB3P54753 998 aa13.31□□□□□ -0.28
HDAC3-204ENST00000469207 CYP4F8P98187 520 aa13.31□□□□□ -0.28
HDAC3-204ENST00000469207 TNK2Q07912 1038 aa13.31□□□□□ -0.28
HDAC3-204ENST00000469207 KARSQ15046 597 aaKnown RBP13.31□□□□□ -0.28
HDAC3-204ENST00000469207 SLC39A12Q504Y0 691 aa13.31□□□□□ -0.28
HDAC3-204ENST00000469207 C9orf57Q5W0N0 161 aa13.31□□□□□ -0.28
HDAC3-204ENST00000469207 HEATR6Q6AI08 1181 aaKnown RBP13.31□□□□□ -0.28
HDAC3-204ENST00000469207 PRR23BQ6ZRT6 265 aa13.31□□□□□ -0.28
HDAC3-204ENST00000469207 Q6ZS52 159 aa13.31□□□□□ -0.28
HDAC3-204ENST00000469207 LRRTM3Q86VH5 581 aa13.31□□□□□ -0.28
HDAC3-204ENST00000469207 YAF2Q8IY57 180 aa13.31□□□□□ -0.28
HDAC3-204ENST00000469207 CSGALNACT1Q8TDX6 532 aa13.31□□□□□ -0.28
HDAC3-204ENST00000469207 GIPC2Q8TF65 315 aa13.31□□□□□ -0.28
HDAC3-204ENST00000469207 TMX3Q96JJ7 454 aa13.31□□□□□ -0.28
HDAC3-204ENST00000469207 FIZ1Q96SL8 496 aa13.31□□□□□ -0.28
HDAC3-204ENST00000469207 MSTO1Q9BUK6 570 aa13.31□□□□□ -0.28
HDAC3-204ENST00000469207 CPSF3Q9UKF6 684 aaKnown RBP13.31□□□□□ -0.28
HDAC3-204ENST00000469207 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.31□□□□□ -0.28
HDAC3-204ENST00000469207 ANK1P16157 1881 aa13.3□□□□□ -0.28
HDAC3-204ENST00000469207 OR6C75A6NL08 312 aa13.3□□□□□ -0.28
HDAC3-204ENST00000469207 H3BQV1 296 aa13.3□□□□□ -0.28
HDAC3-204ENST00000469207 TULP1O00294 542 aaPredicted RBP13.3□□□□□ -0.28
HDAC3-204ENST00000469207 PIRO00625 290 aa13.3□□□□□ -0.28
HDAC3-204ENST00000469207 CHADO15335 359 aa13.3□□□□□ -0.28
HDAC3-204ENST00000469207 FAM13AO94988 1023 aa13.3□□□□□ -0.28
HDAC3-204ENST00000469207 TYMPP19971 482 aa13.3□□□□□ -0.28
HDAC3-204ENST00000469207 FCHO2Q0JRZ9 810 aa13.3□□□□□ -0.28
HDAC3-204ENST00000469207 PON2Q15165 354 aa13.3□□□□□ -0.28
HDAC3-204ENST00000469207 GPR158Q5T848 1215 aa13.3□□□□□ -0.28
HDAC3-204ENST00000469207 ARMCX5Q6P1M9 558 aa13.3□□□□□ -0.28
HDAC3-204ENST00000469207 MAMSTRQ6ZN01 415 aa13.3□□□□□ -0.28
HDAC3-204ENST00000469207 LEMD2Q8NC56 503 aa13.3□□□□□ -0.28
HDAC3-204ENST00000469207 STKLD1Q8NE28 680 aa13.3□□□□□ -0.28
HDAC3-204ENST00000469207 PSMG2Q969U7 264 aa13.3□□□□□ -0.28
HDAC3-204ENST00000469207 BORCS6Q96GS4 357 aa13.3□□□□□ -0.28
HDAC3-204ENST00000469207 SEPT5Q99719 369 aaPredicted RBP13.3□□□□□ -0.28
HDAC3-204ENST00000469207 GPR88Q9GZN0 384 aa13.3□□□□□ -0.28
HDAC3-204ENST00000469207 KCND2Q9NZV8 630 aa13.3□□□□□ -0.28
HDAC3-204ENST00000469207 ANO9A1A5B4 782 aa13.29□□□□□ -0.28
HDAC3-204ENST00000469207 SPECC1L-ADORA2AF8WAN1 911 aa13.29□□□□□ -0.28
HDAC3-204ENST00000469207 K7ESF4 209 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms