RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 POLR2BP30876 1174 aaKnown RBP8.1□□□□□ -1.11
COL6A3-208ENST00000468792 CARSP49589 748 aaKnown RBP8.1□□□□□ -1.11
COL6A3-208ENST00000468792 CPT1AP50416 773 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 HUNKP57058 714 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 COPS2P61201 443 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 RBP5P82980 135 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 TFAMQ00059 246 aaKnown RBP8.1□□□□□ -1.11
COL6A3-208ENST00000468792 INCA1Q0VD86 236 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 STILQ15468 1287 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 SLC10A6Q3KNW5 377 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 ZNF667Q5HYK9 610 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 PPP1R15BQ5SWA1 713 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 NAA35Q5VZE5 725 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 DUPD1Q68J44 220 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 LRIG3Q6UXM1 1119 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 SND1Q7KZF4 910 aaKnown RBP eCLIP8.1□□□□□ -1.11
COL6A3-208ENST00000468792 SLC13A5Q86YT5 568 aaPredicted RBP8.1□□□□□ -1.11
COL6A3-208ENST00000468792 RASAL3Q86YV0 1011 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 RHOT1Q8IXI2 618 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 THNSL1Q8IYQ7 743 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 KATNAL2Q8IYT4 538 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 C1orf127Q8N9H9 656 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 FEZF2Q8TBJ5 459 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 KRT35Q92764 455 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 ACAP3Q96P50 834 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 ERP44Q9BS26 406 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 KATNAL1Q9BW62 490 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 GCOM2Q9BZD3 368 aaPredicted RBP8.1□□□□□ -1.11
COL6A3-208ENST00000468792 MIS12Q9H081 205 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 WDR35Q9P2L0 1181 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 PARP2Q9UGN5 583 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 IP6K2Q9UHH9 426 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 RASAL2Q9UJF2 1139 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 ANAPC7Q9UJX3 599 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 GJD2Q9UKL4 321 aa8.1□□□□□ -1.11
COL6A3-208ENST00000468792 UMODL1Q5DID0 1318 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 KAT6AQ92794 2004 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 H3BQF6 201 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 MEFVO15553 781 aaPredicted RBP8.09□□□□□ -1.11
COL6A3-208ENST00000468792 GPR32O75388 356 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 ERLIN2O94905 339 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 HMGCRP04035 888 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 GJB1P08034 283 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 FAM163BP0C2L3 166 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 ZNF286BP0CG31 522 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 CXCL8P10145 99 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 PYGMP11217 842 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 GNAT1P11488 350 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 HARSP12081 509 aaKnown RBP8.09□□□□□ -1.11
COL6A3-208ENST00000468792 ITGA4P13612 1032 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 HOXA11P31270 313 aaPredicted RBP8.09□□□□□ -1.11
COL6A3-208ENST00000468792 PTPN7P35236 360 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 RGS2P41220 211 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 PTGIRP43119 386 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 TNNT3P45378 269 aaPredicted RBP8.09□□□□□ -1.11
COL6A3-208ENST00000468792 GABRB2P47870 512 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 DNA2P51530 1060 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 IGBP1P78318 339 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 DR1Q01658 176 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 DMTNQ08495 405 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 MTMR3Q13615 1198 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 PIGHQ14442 188 aaPredicted RBP8.09□□□□□ -1.11
COL6A3-208ENST00000468792 TMEM132DQ14C87 1099 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 ACAP1Q15027 740 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 SIX1Q15475 284 aaPredicted RBP8.09□□□□□ -1.11
COL6A3-208ENST00000468792 ZBTB6Q15916 424 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 TMEM132AQ24JP5 1023 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 SEZ6Q53EL9 994 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 XKR4Q5GH76 650 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 GJC2Q5T442 439 aaPredicted RBP8.09□□□□□ -1.11
COL6A3-208ENST00000468792 SLC27A1Q6PCB7 646 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 ALKAL1Q6UXT8 129 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 ILDR2Q71H61 639 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 KLHL7Q8IXQ5 586 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 EFCAB3Q8N7B9 438 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 LRRC52Q8N7C0 313 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 PRELID2Q8N945 189 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 C3orf20Q8ND61 904 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 EXD1Q8NHP7 514 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 NLRP7Q8WX94 980 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 CPA5Q8WXQ8 436 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 KAT2BQ92831 832 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 DDX27Q96GQ7 796 aaKnown RBP8.09□□□□□ -1.11
COL6A3-208ENST00000468792 HHIPL1Q96JK4 782 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 AP1M1Q9BXS5 423 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 DDX47Q9H0S4 455 aaKnown RBP8.09□□□□□ -1.11
COL6A3-208ENST00000468792 AMACRQ9UHK6 382 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 ADAM21Q9UKJ8 722 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 ZHX1Q9UKY1 873 aaPredicted RBP8.09□□□□□ -1.11
COL6A3-208ENST00000468792 NFU1Q9UMS0 254 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 EFR3BQ9Y2G0 817 aa8.09□□□□□ -1.11
COL6A3-208ENST00000468792 SIGLEC16A6NMB1 481 aa8.08□□□□□ -1.12
COL6A3-208ENST00000468792 IGF2BP3O00425 579 aaKnown RBP eCLIP8.08□□□□□ -1.12
COL6A3-208ENST00000468792 DYNC1LI2O43237 492 aaPredicted RBP8.08□□□□□ -1.12
COL6A3-208ENST00000468792 ATMINO43313 823 aaPredicted RBP8.08□□□□□ -1.12
COL6A3-208ENST00000468792 HSF2BPO75031 334 aa8.08□□□□□ -1.12
COL6A3-208ENST00000468792 CILPO75339 1184 aa8.08□□□□□ -1.12
COL6A3-208ENST00000468792 VTNP04004 478 aa8.08□□□□□ -1.12
COL6A3-208ENST00000468792 NFICP08651 508 aa8.08□□□□□ -1.12
COL6A3-208ENST00000468792 SLC10A3P09131 477 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms