RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 COL25A1Q9BXS0 654 aaPredicted RBP12.09□□□□□ -0.47
MSH5-214ENST00000468602 XPO4Q9C0E2 1151 aaKnown RBP12.09□□□□□ -0.47
MSH5-214ENST00000468602 LMAN2LQ9H0V9 348 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 GANQ9H2C0 597 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 IFNKQ9P0W0 207 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 HCSTQ9UBK5 93 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 R3HCC1Q9Y3T6 440 aaKnown RBP12.09□□□□□ -0.47
MSH5-214ENST00000468602 NUB1Q9Y5A7 615 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 TSC2P49815 1807 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 GOLGA6L3A6NEY3 463 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 GRXCR1A8MXD5 290 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 FSCN2O14926 492 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 TADA2AO75478 443 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 FGF18O76093 207 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 ITGB1P05556 798 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 UCHL3P15374 230 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 POU3F3P20264 500 aaPredicted RBP12.08□□□□□ -0.48
MSH5-214ENST00000468602 DNAJB2P25686 324 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 LHX1P48742 406 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 RABGGTBP53611 331 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 DSG1Q02413 1049 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 KRT17Q04695 432 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 CUL2Q13617 745 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 TRIM14Q14142 442 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 GSE1Q14687 1217 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 SYCP1Q15431 976 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 SOWAHAQ2M3V2 549 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 USP41Q3LFD5 358 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 WDR72Q3MJ13 1102 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 KIAA0319Q5VV43 1072 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 FAM117BQ6P1L5 589 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 TMEM173Q86WV6 379 aaPredicted RBP12.08□□□□□ -0.48
MSH5-214ENST00000468602 SPPL3Q8TCT6 385 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 BCL7CQ8WUZ0 217 aaPredicted RBP12.08□□□□□ -0.48
MSH5-214ENST00000468602 KBTBD7Q8WVZ9 684 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 SHC3Q92529 594 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 TMEM169Q96HH4 297 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 FAM84AQ96KN4 292 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 STK33Q9BYT3 514 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 GPR62Q9BZJ7 368 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 GRPEL1Q9HAV7 217 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 RXFP1Q9HBX9 757 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 LMCD1Q9NZU5 365 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 CEP72Q9P209 647 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 SSX2IPQ9Y2D8 614 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 BACE2Q9Y5Z0 518 aa12.08□□□□□ -0.48
MSH5-214ENST00000468602 HUS1O60921 280 aa12.07□□□□□ -0.48
MSH5-214ENST00000468602 LRRN2O75325 713 aa12.07□□□□□ -0.48
MSH5-214ENST00000468602 CILPO75339 1184 aa12.07□□□□□ -0.48
MSH5-214ENST00000468602 ARHGEF15O94989 841 aa12.07□□□□□ -0.48
MSH5-214ENST00000468602 PAPLNO95428 1278 aa12.07□□□□□ -0.48
MSH5-214ENST00000468602 KRT19P08727 400 aa12.07□□□□□ -0.48
MSH5-214ENST00000468602 CTSAP10619 480 aa12.07□□□□□ -0.48
MSH5-214ENST00000468602 ODC1P11926 461 aa12.07□□□□□ -0.48
MSH5-214ENST00000468602 ACO1P21399 889 aaKnown RBP12.07□□□□□ -0.48
MSH5-214ENST00000468602 IGFBP6P24592 240 aaPredicted RBP12.07□□□□□ -0.48
MSH5-214ENST00000468602 ZNF75DP51815 510 aa12.07□□□□□ -0.48
MSH5-214ENST00000468602 ZNF132P52740 706 aa12.07□□□□□ -0.48
MSH5-214ENST00000468602 MFAP3P55082 362 aa12.07□□□□□ -0.48
MSH5-214ENST00000468602 JAM2P57087 298 aa12.07□□□□□ -0.48
MSH5-214ENST00000468602 YWHAEP62258 255 aaKnown RBP12.07□□□□□ -0.48
MSH5-214ENST00000468602 CREMQ03060 361 aa12.07□□□□□ -0.48
MSH5-214ENST00000468602 SMARCB1Q12824 385 aa12.07□□□□□ -0.48
MSH5-214ENST00000468602 TBX2Q13207 712 aaPredicted RBP12.07□□□□□ -0.48
MSH5-214ENST00000468602 MEA1Q16626 185 aa12.07□□□□□ -0.48
MSH5-214ENST00000468602 SPECC1LQ69YQ0 1117 aa12.07□□□□□ -0.48
MSH5-214ENST00000468602 CRYBG2Q8N1P7 616 aa12.07□□□□□ -0.48
MSH5-214ENST00000468602 SYN2Q92777 582 aaPredicted RBP12.07□□□□□ -0.48
MSH5-214ENST00000468602 ACBD6Q9BR61 282 aa12.07□□□□□ -0.48
MSH5-214ENST00000468602 ZBP1Q9H171 429 aa12.07□□□□□ -0.48
MSH5-214ENST00000468602 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.07□□□□□ -0.48
MSH5-214ENST00000468602 FNIP2Q9P278 1114 aa12.07□□□□□ -0.48
MSH5-214ENST00000468602 PUF60Q9UHX1 559 aaKnown RBP12.07□□□□□ -0.48
MSH5-214ENST00000468602 MAFFQ9ULX9 164 aa12.07□□□□□ -0.48
MSH5-214ENST00000468602 BARX2Q9UMQ3 279 aaPredicted RBP12.07□□□□□ -0.48
MSH5-214ENST00000468602 L1RE1Q9UN81 338 aa12.07□□□□□ -0.48
MSH5-214ENST00000468602 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.07□□□□□ -0.482e-9■□□□□ 9.3
MSH5-214ENST00000468602 H7C4K7 107 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 CYB561D2O14569 222 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 MYOGP15173 224 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 HNRNPH3P31942 346 aaKnown RBP12.06□□□□□ -0.48
MSH5-214ENST00000468602 PBX2P40425 430 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 BRCC3P46736 316 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 TNNC1P63316 161 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 CAMK1Q14012 370 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 SLC8B1Q6J4K2 584 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 ANKS3Q6ZW76 656 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 CREBRFQ8IUR6 639 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 FAM71AQ8IYT1 594 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 PDCL2Q8N4E4 241 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 KLHL23Q8NBE8 558 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 BAP1Q92560 729 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 TATDN2Q93075 761 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 TIFAQ96CG3 184 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 KREMEN1Q96MU8 473 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 CRACR2AQ9BSW2 395 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 TTPALQ9BTX7 342 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 TRIM5Q9C035 493 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 GPR88Q9GZN0 384 aa12.06□□□□□ -0.48
MSH5-214ENST00000468602 NUCKS1Q9H1E3 243 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms