RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 PRKCBP05771 671 aa12.91□□□□□ -0.34
VPS26A-204ENST00000467852 CCR10P46092 362 aa12.91□□□□□ -0.34
VPS26A-204ENST00000467852 LAMTOR4Q0VGL1 99 aa12.91□□□□□ -0.34
VPS26A-204ENST00000467852 PRICKLE2Q7Z3G6 844 aa12.91□□□□□ -0.34
VPS26A-204ENST00000467852 EXOC8Q8IYI6 725 aa12.91□□□□□ -0.34
VPS26A-204ENST00000467852 RNF149Q8NC42 400 aa12.91□□□□□ -0.34
VPS26A-204ENST00000467852 OLIG1Q8TAK6 271 aa12.91□□□□□ -0.34
VPS26A-204ENST00000467852 SLC7A3Q8WY07 619 aa12.91□□□□□ -0.34
VPS26A-204ENST00000467852 NXPE2Q96DL1 559 aa12.91□□□□□ -0.34
VPS26A-204ENST00000467852 SEMA4CQ9C0C4 833 aa12.91□□□□□ -0.34
VPS26A-204ENST00000467852 PCOLCE2Q9UKZ9 415 aa12.91□□□□□ -0.34
VPS26A-204ENST00000467852 MAFFQ9ULX9 164 aa12.91□□□□□ -0.34
VPS26A-204ENST00000467852 ZNF638Q14966 1978 aaKnown RBP12.9□□□□□ -0.34
VPS26A-204ENST00000467852 PLXND1Q9Y4D7 1925 aa12.9□□□□□ -0.34
VPS26A-204ENST00000467852 AP5Z1O43299 807 aa12.9□□□□□ -0.34
VPS26A-204ENST00000467852 TLX3O43711 291 aaPredicted RBP12.9□□□□□ -0.34
VPS26A-204ENST00000467852 B3GAT3O94766 335 aa12.9□□□□□ -0.34
VPS26A-204ENST00000467852 NPTXRO95502 500 aa12.9□□□□□ -0.34
VPS26A-204ENST00000467852 CALM1P0DP23 149 aa12.9□□□□□ -0.34
VPS26A-204ENST00000467852 CALM2P0DP24 149 aa12.9□□□□□ -0.34
VPS26A-204ENST00000467852 CALM3P0DP25 149 aa12.9□□□□□ -0.34
VPS26A-204ENST00000467852 SEMG2Q02383 582 aa12.9□□□□□ -0.34
VPS26A-204ENST00000467852 PREPLQ4J6C6 727 aaPredicted RBP12.9□□□□□ -0.34
VPS26A-204ENST00000467852 ARHGAP15Q53QZ3 475 aa12.9□□□□□ -0.34
VPS26A-204ENST00000467852 PRR16Q569H4 304 aa12.9□□□□□ -0.34
VPS26A-204ENST00000467852 PPP1R15BQ5SWA1 713 aa12.9□□□□□ -0.34
VPS26A-204ENST00000467852 STXBP5Q5T5C0 1151 aa12.9□□□□□ -0.34
VPS26A-204ENST00000467852 ZNF654Q8IZM8 581 aa12.9□□□□□ -0.34
VPS26A-204ENST00000467852 CCDC82Q8N4S0 544 aa12.9□□□□□ -0.34
VPS26A-204ENST00000467852 WHAMMQ8TF30 809 aa12.9□□□□□ -0.34
VPS26A-204ENST00000467852 PNMA5Q96PV4 448 aa12.9□□□□□ -0.34
VPS26A-204ENST00000467852 GLT8D2Q9H1C3 349 aa12.9□□□□□ -0.34
VPS26A-204ENST00000467852 EBF3Q9H4W6 596 aa12.9□□□□□ -0.34
VPS26A-204ENST00000467852 HELZP42694 1942 aaKnown RBP12.9□□□□□ -0.35
VPS26A-204ENST00000467852 GOLGA8CPA6NN73 597 aa12.89□□□□□ -0.35
VPS26A-204ENST00000467852 H7C4K7 107 aa12.89□□□□□ -0.35
VPS26A-204ENST00000467852 TMEM189-UBE2V1I3L0A0 370 aa12.89□□□□□ -0.35
VPS26A-204ENST00000467852 STBD1O95210 358 aa12.89□□□□□ -0.35
VPS26A-204ENST00000467852 ADSSP30520 456 aa12.89□□□□□ -0.35
VPS26A-204ENST00000467852 LY6DQ14210 128 aa12.89□□□□□ -0.35
VPS26A-204ENST00000467852 E2F4Q16254 413 aa12.89□□□□□ -0.35
VPS26A-204ENST00000467852 GPR158Q5T848 1215 aa12.89□□□□□ -0.35
VPS26A-204ENST00000467852 SLC27A1Q6PCB7 646 aa12.89□□□□□ -0.35
VPS26A-204ENST00000467852 RALYLQ86SE5 291 aaKnown RBP12.89□□□□□ -0.35
VPS26A-204ENST00000467852 RILPL2Q969X0 211 aa12.89□□□□□ -0.35
VPS26A-204ENST00000467852 TMEM143Q96AN5 459 aa12.89□□□□□ -0.35
VPS26A-204ENST00000467852 CHFRQ96EP1 664 aa12.89□□□□□ -0.35
VPS26A-204ENST00000467852 TBC1D32Q96NH3 1257 aa12.89□□□□□ -0.35
VPS26A-204ENST00000467852 CDC6Q99741 560 aa12.89□□□□□ -0.35
VPS26A-204ENST00000467852 FAM83CQ9BQN1 747 aa12.89□□□□□ -0.35
VPS26A-204ENST00000467852 ATXN3LQ9H3M9 355 aa12.89□□□□□ -0.35
VPS26A-204ENST00000467852 HPS4Q9NQG7 708 aa12.89□□□□□ -0.35
VPS26A-204ENST00000467852 ARID2Q68CP9 1835 aa12.89□□□□□ -0.35
VPS26A-204ENST00000467852 SMCO2A6NFE2 343 aa12.88□□□□□ -0.35
VPS26A-204ENST00000467852 OTOL1A6NHN0 477 aaPredicted RBP12.88□□□□□ -0.35
VPS26A-204ENST00000467852 INO80B-WBP1J3KQ70 363 aa12.88□□□□□ -0.35
VPS26A-204ENST00000467852 PLK4O00444 970 aa12.88□□□□□ -0.35
VPS26A-204ENST00000467852 SNPHO15079 494 aa12.88□□□□□ -0.35
VPS26A-204ENST00000467852 GAS7O60861 476 aa12.88□□□□□ -0.35
VPS26A-204ENST00000467852 DKK1O94907 266 aa12.88□□□□□ -0.35
VPS26A-204ENST00000467852 FGF19O95750 216 aa12.88□□□□□ -0.35
VPS26A-204ENST00000467852 ATXN1LP0C7T5 689 aaKnown RBP12.88□□□□□ -0.35
VPS26A-204ENST00000467852 ARF4P18085 180 aaPredicted RBP12.88□□□□□ -0.35
VPS26A-204ENST00000467852 SDSP20132 328 aa12.88□□□□□ -0.35
VPS26A-204ENST00000467852 U2AF2P26368 475 aaKnown RBP eCLIP12.88□□□□□ -0.35
VPS26A-204ENST00000467852 WEE1P30291 646 aa12.88□□□□□ -0.35
VPS26A-204ENST00000467852 CYP4A11Q02928 519 aa12.88□□□□□ -0.35
VPS26A-204ENST00000467852 PLD1Q13393 1074 aa12.88□□□□□ -0.35
VPS26A-204ENST00000467852 C4orf17Q53FE4 359 aa12.88□□□□□ -0.35
VPS26A-204ENST00000467852 PPP1R18Q6NYC8 613 aa12.88□□□□□ -0.35
VPS26A-204ENST00000467852 MIER3Q7Z3K6 550 aa12.88□□□□□ -0.35
VPS26A-204ENST00000467852 FRMD1Q8N878 549 aa12.88□□□□□ -0.35
VPS26A-204ENST00000467852 ZNF513Q8N8E2 541 aaPredicted RBP12.88□□□□□ -0.35
VPS26A-204ENST00000467852 RDM1Q8NG50 284 aa12.88□□□□□ -0.35
VPS26A-204ENST00000467852 TCP11Q8WWU5 503 aa12.88□□□□□ -0.35
VPS26A-204ENST00000467852 CD101Q93033 1021 aa12.88□□□□□ -0.35
VPS26A-204ENST00000467852 PRDM16Q9HAZ2 1276 aa12.88□□□□□ -0.35
VPS26A-204ENST00000467852 TOR4AQ9NXH8 423 aa12.88□□□□□ -0.35
VPS26A-204ENST00000467852 BCCIPQ9P287 314 aaKnown RBP eCLIP12.88□□□□□ -0.35
VPS26A-204ENST00000467852 AFF4Q9UHB7 1163 aaKnown RBP12.88□□□□□ -0.35
VPS26A-204ENST00000467852 AK5Q9Y6K8 562 aa12.88□□□□□ -0.35
VPS26A-204ENST00000467852 NBPF19A0A087WUL8 3843 aa12.87□□□□□ -0.35
VPS26A-204ENST00000467852 I3L4J1 428 aa12.87□□□□□ -0.35
VPS26A-204ENST00000467852 PTGESO14684 152 aa12.87□□□□□ -0.35
VPS26A-204ENST00000467852 CLK2P49760 499 aaKnown RBP12.87□□□□□ -0.35
VPS26A-204ENST00000467852 EPHB3P54753 998 aa12.87□□□□□ -0.35
VPS26A-204ENST00000467852 RPL6Q02878 288 aaKnown RBP12.87□□□□□ -0.35
VPS26A-204ENST00000467852 SMAD1Q15797 465 aaKnown RBP12.87□□□□□ -0.35
VPS26A-204ENST00000467852 CRY1Q16526 586 aa12.87□□□□□ -0.35
VPS26A-204ENST00000467852 PLEKHG6Q3KR16 790 aa12.87□□□□□ -0.35
VPS26A-204ENST00000467852 C6orf118Q5T5N4 469 aa12.87□□□□□ -0.35
VPS26A-204ENST00000467852 JAKMIP3Q5VZ66 844 aa12.87□□□□□ -0.35
VPS26A-204ENST00000467852 WWC2Q6AWC2 1192 aa12.87□□□□□ -0.35
VPS26A-204ENST00000467852 TRIM68Q6AZZ1 485 aa12.87□□□□□ -0.35
VPS26A-204ENST00000467852 CWC27Q6UX04 472 aaKnown RBP12.87□□□□□ -0.35
VPS26A-204ENST00000467852 ZNF574Q6ZN55 896 aaPredicted RBP12.87□□□□□ -0.35
VPS26A-204ENST00000467852 TMC8Q8IU68 726 aa12.87□□□□□ -0.35
VPS26A-204ENST00000467852 CRYGNQ8WXF5 182 aa12.87□□□□□ -0.35
VPS26A-204ENST00000467852 RIT2Q99578 217 aa12.87□□□□□ -0.35
VPS26A-204ENST00000467852 TEKT3Q9BXF9 490 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms