RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 TAF4BQ92750 862 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 RNPC3Q96LT9 517 aaKnown RBP7.35□□□□□ -1.23
SCAF4-204ENST00000467731 ZNF560Q96MR9 790 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 UROC1Q96N76 676 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 GDF15Q99988 308 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 ZBED2Q9BTP6 218 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 NUP58Q9BVL2 599 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 NAA15Q9BXJ9 866 aaKnown RBP7.35□□□□□ -1.23
SCAF4-204ENST00000467731 MED4Q9NPJ6 270 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 CEP72Q9P209 647 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 RSPH14Q9UHP6 348 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 FBXL5Q9UKA1 691 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 DNAJC12Q9UKB3 198 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 PRG3Q9Y2Y8 225 aaPredicted RBP7.35□□□□□ -1.23
SCAF4-204ENST00000467731 SNX9Q9Y5X1 595 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 EYSQ5T1H1 3165 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 TSC2P49815 1807 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 KPNA7A9QM74 516 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 NT5C1B-RDH14C9J2C7 533 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 KIF4AO95239 1232 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 STAU1O95793 577 aaKnown RBP7.35□□□□□ -1.23
SCAF4-204ENST00000467731 GTF2F1P35269 517 aaKnown RBP eCLIP7.35□□□□□ -1.23
SCAF4-204ENST00000467731 PNPLA4P41247 253 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 ASPAP45381 313 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 RGS19P49795 217 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 HTRA4P83105 476 aaPredicted RBP7.35□□□□□ -1.23
SCAF4-204ENST00000467731 CUL2Q13617 745 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 TRIM14Q14142 442 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 ARHGAP44Q17R89 818 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 PPFIBP1Q86W92 1011 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 PHOSPHO2Q8TCD6 241 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 BAP1Q92560 729 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 DDX27Q96GQ7 796 aaKnown RBP7.35□□□□□ -1.23
SCAF4-204ENST00000467731 KREMEN1Q96MU8 473 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 MMS19Q96T76 1030 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 NIF3L1Q9GZT8 377 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 CWH43Q9H720 699 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 OGFRQ9NZT2 677 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 CAPN11Q9UMQ6 739 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 POLIQ9UNA4 740 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 SPTBN5Q9NRC6 3674 aaKnown RBP7.35□□□□□ -1.23
SCAF4-204ENST00000467731 REV3LO60673 3130 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 A0A1W2PQJ5 194 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 SPDYE4A6NLX3 237 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 NRP1O14786 923 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 PNMA6AP0CW24 399 aaPredicted RBP7.35□□□□□ -1.23
SCAF4-204ENST00000467731 RFX1P22670 979 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 SLC11A1P49279 550 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 ADKP55263 362 aaKnown RBP7.35□□□□□ -1.23
SCAF4-204ENST00000467731 SV2CQ496J9 727 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 TMEM173Q86WV6 379 aaPredicted RBP7.35□□□□□ -1.23
SCAF4-204ENST00000467731 CMTR2Q8IYT2 770 aaKnown RBP7.35□□□□□ -1.23
SCAF4-204ENST00000467731 CALR3Q96L12 384 aaKnown RBP7.35□□□□□ -1.23
SCAF4-204ENST00000467731 SPAG5Q96R06 1193 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 UBE2OQ9C0C9 1292 aaKnown RBP7.35□□□□□ -1.23
SCAF4-204ENST00000467731 GPR88Q9GZN0 384 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 SMYD3Q9H7B4 428 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 IMPACTQ9P2X3 320 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 LUC7L2Q9Y383 392 aaKnown RBP7.35□□□□□ -1.23
SCAF4-204ENST00000467731 INSL6Q9Y581 213 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 LRRC53A6NM62 1247 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 TLL1O43897 1013 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 MFAP3LO75121 409 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 ALDH2P05091 517 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 GALTP07902 379 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 WEE2P0C1S8 567 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 P4HA1P13674 534 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 TBXAS1P24557 533 aaPredicted RBP7.34□□□□□ -1.23
SCAF4-204ENST00000467731 KRT9P35527 623 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 BRCC3P46736 316 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 RAP1GAPP47736 663 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 ALDH7A1P49419 539 aaKnown RBP7.34□□□□□ -1.23
SCAF4-204ENST00000467731 MFAP3P55082 362 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 CDH8P55286 799 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 BCAR1P56945 870 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 TNNC1P63316 161 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 DRAP1Q14919 205 aaPredicted RBP7.34□□□□□ -1.23
SCAF4-204ENST00000467731 SPOUT1Q5T280 376 aaKnown RBP7.34□□□□□ -1.23
SCAF4-204ENST00000467731 FAM109BQ6ICB4 259 aaPredicted RBP7.34□□□□□ -1.23
SCAF4-204ENST00000467731 DCLRE1AQ6PJP8 1040 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 CD300LGQ6UXG3 332 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 GPIHBP1Q8IV16 184 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 IQCDQ96DY2 449 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 RAD9AQ99638 391 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 STK33Q9BYT3 514 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 BCO2Q9BYV7 579 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 GDAP2Q9NXN4 497 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 FAN1Q9Y2M0 1017 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 MRPL42Q9Y6G3 142 aaKnown RBP7.34□□□□□ -1.23
SCAF4-204ENST00000467731 MYH10P35580 1976 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 LCHNA4D1U4 455 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 AKR1B15C9JRZ8 316 aaPredicted RBP7.34□□□□□ -1.23
SCAF4-204ENST00000467731 F8VZ95 297 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 I3L4J1 428 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 TPM1P09493 284 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 CD58P19256 250 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 AARSP49588 968 aaKnown RBP eCLIP7.34□□□□□ -1.23
SCAF4-204ENST00000467731 RABGGTBP53611 331 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 JAM2P57087 298 aa7.34□□□□□ -1.23
SCAF4-204ENST00000467731 MTA1Q13330 715 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms