RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 XPOTO43592 962 aaKnown RBP15.23■□□□□ 0.03
CCHCR1-211ENST00000467553 TBC1D4O60343 1298 aa15.23■□□□□ 0.03
CCHCR1-211ENST00000467553 LDHAP00338 332 aaKnown RBP15.23■□□□□ 0.03
CCHCR1-211ENST00000467553 ATF2P15336 505 aa15.23■□□□□ 0.03
CCHCR1-211ENST00000467553 PTPN2P17706 415 aa15.23■□□□□ 0.03
CCHCR1-211ENST00000467553 PAX3P23760 479 aa15.23■□□□□ 0.03
CCHCR1-211ENST00000467553 GUCY2FP51841 1108 aa15.23■□□□□ 0.03
CCHCR1-211ENST00000467553 ZBTB6Q15916 424 aa15.23■□□□□ 0.03
CCHCR1-211ENST00000467553 VARS2Q5ST30 1063 aaKnown RBP15.23■□□□□ 0.03
CCHCR1-211ENST00000467553 ZC3H14Q6PJT7 736 aaKnown RBP15.23■□□□□ 0.03
CCHCR1-211ENST00000467553 CRELD2Q6UXH1 353 aaPredicted RBP15.23■□□□□ 0.03
CCHCR1-211ENST00000467553 CD302Q8IX05 232 aa15.23■□□□□ 0.03
CCHCR1-211ENST00000467553 TCEAL8Q8IYN2 117 aa15.23■□□□□ 0.03
CCHCR1-211ENST00000467553 ZSWIM2Q8NEG5 633 aa15.23■□□□□ 0.03
CCHCR1-211ENST00000467553 ZNF507Q8TCN5 953 aa15.23■□□□□ 0.03
CCHCR1-211ENST00000467553 FGF14Q92915 247 aa15.23■□□□□ 0.03
CCHCR1-211ENST00000467553 SAAL1Q96ER3 474 aa15.23■□□□□ 0.03
CCHCR1-211ENST00000467553 SUSD3Q96L08 255 aa15.23■□□□□ 0.03
CCHCR1-211ENST00000467553 FAM213AQ9BRX8 229 aa15.23■□□□□ 0.03
CCHCR1-211ENST00000467553 NOTCH4Q99466 2003 aa15.22■□□□□ 0.03
CCHCR1-211ENST00000467553 ECI2O75521 394 aa15.22■□□□□ 0.03
CCHCR1-211ENST00000467553 LRG1P02750 347 aa15.22■□□□□ 0.03
CCHCR1-211ENST00000467553 ADRB2P07550 413 aa15.22■□□□□ 0.03
CCHCR1-211ENST00000467553 CYP3A5P20815 502 aa15.22■□□□□ 0.03
CCHCR1-211ENST00000467553 GARTP22102 1010 aa15.22■□□□□ 0.03
CCHCR1-211ENST00000467553 MCM4P33991 863 aa15.22■□□□□ 0.03
CCHCR1-211ENST00000467553 FOXK2Q01167 660 aa15.22■□□□□ 0.03
CCHCR1-211ENST00000467553 ROR1Q01973 937 aa15.22■□□□□ 0.03
CCHCR1-211ENST00000467553 ARMCX5Q6P1M9 558 aa15.22■□□□□ 0.03
CCHCR1-211ENST00000467553 PARM1Q6UWI2 310 aa15.22■□□□□ 0.03
CCHCR1-211ENST00000467553 ASCL5Q7RTU5 278 aa15.22■□□□□ 0.03
CCHCR1-211ENST00000467553 FRMD5Q7Z6J6 570 aa15.22■□□□□ 0.03
CCHCR1-211ENST00000467553 NELFCDQ8IXH7 590 aa15.22■□□□□ 0.03
CCHCR1-211ENST00000467553 LEMD2Q8NC56 503 aa15.22■□□□□ 0.03
CCHCR1-211ENST00000467553 BEST2Q8NFU1 509 aa15.22■□□□□ 0.03
CCHCR1-211ENST00000467553 ITFG1Q8TB96 612 aa15.22■□□□□ 0.03
CCHCR1-211ENST00000467553 NELL2Q99435 816 aa15.22■□□□□ 0.03
CCHCR1-211ENST00000467553 CBWD1Q9BRT8 395 aa15.22■□□□□ 0.03
CCHCR1-211ENST00000467553 GOLPH3LQ9H4A5 285 aa15.22■□□□□ 0.03
CCHCR1-211ENST00000467553 ASB7Q9H672 318 aa15.22■□□□□ 0.03
CCHCR1-211ENST00000467553 DNMT3BQ9UBC3 853 aaKnown RBP15.22■□□□□ 0.03
CCHCR1-211ENST00000467553 MRPS23Q9Y3D9 190 aaKnown RBP15.22■□□□□ 0.03
CCHCR1-211ENST00000467553 FAM237AA0A1B0GTK4 181 aa15.21■□□□□ 0.03
CCHCR1-211ENST00000467553 EIF3DO15371 548 aaKnown RBP eCLIP15.21■□□□□ 0.03
CCHCR1-211ENST00000467553 KLRC4O43908 158 aa15.21■□□□□ 0.03
CCHCR1-211ENST00000467553 ZNF202O95125 648 aa15.21■□□□□ 0.03
CCHCR1-211ENST00000467553 RHOP08100 348 aa15.21■□□□□ 0.03
CCHCR1-211ENST00000467553 NFICP08651 508 aa15.21■□□□□ 0.03
CCHCR1-211ENST00000467553 HOXD13P35453 343 aa15.21■□□□□ 0.03
CCHCR1-211ENST00000467553 GPC5P78333 572 aa15.21■□□□□ 0.03
CCHCR1-211ENST00000467553 NTHL1P78549 312 aa15.21■□□□□ 0.03
CCHCR1-211ENST00000467553 TMEM132DQ14C87 1099 aa15.21■□□□□ 0.03
CCHCR1-211ENST00000467553 SPATA1Q5VX52 437 aa15.21■□□□□ 0.03
CCHCR1-211ENST00000467553 ZNF280DQ6N043 979 aa15.21■□□□□ 0.03
CCHCR1-211ENST00000467553 EPM2AIP1Q7L775 607 aaPredicted RBP15.21■□□□□ 0.03
CCHCR1-211ENST00000467553 C1orf210Q8IVY1 113 aa15.21■□□□□ 0.03
CCHCR1-211ENST00000467553 ELMOD1Q8N336 334 aa15.21■□□□□ 0.03
CCHCR1-211ENST00000467553 PJA1Q8NG27 643 aa15.21■□□□□ 0.03
CCHCR1-211ENST00000467553 DDX23Q9BUQ8 820 aaKnown RBP15.21■□□□□ 0.03
CCHCR1-211ENST00000467553 EXOC1Q9NV70 894 aa15.21■□□□□ 0.03
CCHCR1-211ENST00000467553 DLGAP2Q9P1A6 1054 aa15.21■□□□□ 0.03
CCHCR1-211ENST00000467553 ANK1P16157 1881 aa15.2■□□□□ 0.02
CCHCR1-211ENST00000467553 WDR87Q6ZQQ6 2873 aa15.2■□□□□ 0.02
CCHCR1-211ENST00000467553 MIA3Q5JRA6 1907 aa15.2■□□□□ 0.02
CCHCR1-211ENST00000467553 KANSL1LA0AUZ9 987 aa15.2■□□□□ 0.02
CCHCR1-211ENST00000467553 WDR27A2RRH5 827 aa15.2■□□□□ 0.02
CCHCR1-211ENST00000467553 PRRG1O14668 218 aa15.2■□□□□ 0.02
CCHCR1-211ENST00000467553 CLIC2O15247 247 aa15.2■□□□□ 0.02
CCHCR1-211ENST00000467553 NCAM2O15394 837 aa15.2■□□□□ 0.02
CCHCR1-211ENST00000467553 EXTL3O43909 919 aa15.2■□□□□ 0.02
CCHCR1-211ENST00000467553 IL18RAPO95256 599 aa15.2■□□□□ 0.02
CCHCR1-211ENST00000467553 LRPAP1P30533 357 aa15.2■□□□□ 0.02
CCHCR1-211ENST00000467553 ANP32AP39687 249 aaKnown RBP15.2■□□□□ 0.02
CCHCR1-211ENST00000467553 EHHADHQ08426 723 aa15.2■□□□□ 0.02
CCHCR1-211ENST00000467553 MLF2Q15773 248 aaPredicted RBP15.2■□□□□ 0.02
CCHCR1-211ENST00000467553 KMT5BQ4FZB7 885 aa15.2■□□□□ 0.02
CCHCR1-211ENST00000467553 SLC44A4Q53GD3 710 aa15.2■□□□□ 0.02
CCHCR1-211ENST00000467553 KRBA2Q6ZNG9 492 aa15.2■□□□□ 0.02
CCHCR1-211ENST00000467553 NPAS3Q8IXF0 933 aa15.2■□□□□ 0.02
CCHCR1-211ENST00000467553 GPD1LQ8N335 351 aa15.2■□□□□ 0.02
CCHCR1-211ENST00000467553 SCFD1Q8WVM8 642 aa15.2■□□□□ 0.02
CCHCR1-211ENST00000467553 ELSPBP1Q96BH3 223 aa15.2■□□□□ 0.02
CCHCR1-211ENST00000467553 DPP3Q9NY33 737 aa15.2■□□□□ 0.02
CCHCR1-211ENST00000467553 AFF4Q9UHB7 1163 aaKnown RBP15.2■□□□□ 0.02
CCHCR1-211ENST00000467553 PCDHB8Q9UN66 801 aa15.2■□□□□ 0.02
CCHCR1-211ENST00000467553 DERAQ9Y315 318 aa15.2■□□□□ 0.02
CCHCR1-211ENST00000467553 M0QZQ0 153 aa15.19■□□□□ 0.02
CCHCR1-211ENST00000467553 PPEF2O14830 753 aa15.19■□□□□ 0.02
CCHCR1-211ENST00000467553 OAZ2O95190 189 aa15.19■□□□□ 0.02
CCHCR1-211ENST00000467553 RPN1P04843 607 aaKnown RBP15.19■□□□□ 0.02
CCHCR1-211ENST00000467553 PRR29P0C7W0 189 aa15.19■□□□□ 0.02
CCHCR1-211ENST00000467553 POU5F1Q01860 360 aaKnown RBP15.19■□□□□ 0.02
CCHCR1-211ENST00000467553 STK4Q13043 487 aa15.19■□□□□ 0.02
CCHCR1-211ENST00000467553 PSMD2Q13200 908 aa15.19■□□□□ 0.02
CCHCR1-211ENST00000467553 ZNF528Q3MIS6 628 aa15.19■□□□□ 0.02
CCHCR1-211ENST00000467553 CTXN3Q4LDR2 81 aa15.19■□□□□ 0.02
CCHCR1-211ENST00000467553 CYP4A22Q5TCH4 519 aa15.19■□□□□ 0.02
CCHCR1-211ENST00000467553 IQCEQ6IPM2 695 aa15.19■□□□□ 0.02
CCHCR1-211ENST00000467553 DSTYKQ6XUX3 929 aa15.19■□□□□ 0.02
CCHCR1-211ENST00000467553 RDH13Q8NBN7 331 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms