RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 CRELD1Q96HD1 420 aa11.25□□□□□ -0.61
HDAC3-203ENST00000467533 POLR3CQ9BUI4 534 aaPredicted RBP11.25□□□□□ -0.61
HDAC3-203ENST00000467533 EBF3Q9H4W6 596 aa11.25□□□□□ -0.61
HDAC3-203ENST00000467533 HPS4Q9NQG7 708 aa11.25□□□□□ -0.61
HDAC3-203ENST00000467533 FSCN3Q9NQT6 498 aa11.25□□□□□ -0.61
HDAC3-203ENST00000467533 GKN1Q9NS71 199 aa11.25□□□□□ -0.61
HDAC3-203ENST00000467533 MBD1Q9UIS9 605 aaPredicted RBP11.25□□□□□ -0.61
HDAC3-203ENST00000467533 TTLL13PA6NNM8 815 aa11.24□□□□□ -0.61
HDAC3-203ENST00000467533 GABRR2P28476 465 aa11.24□□□□□ -0.61
HDAC3-203ENST00000467533 RCAN1P53805 252 aa11.24□□□□□ -0.61
HDAC3-203ENST00000467533 CYP4F8P98187 520 aa11.24□□□□□ -0.61
HDAC3-203ENST00000467533 HNRNPDQ14103 355 aaKnown RBP11.24□□□□□ -0.61
HDAC3-203ENST00000467533 MRPL58Q14197 206 aaKnown RBP11.24□□□□□ -0.61
HDAC3-203ENST00000467533 DCAF4L1Q3SXM0 396 aa11.24□□□□□ -0.61
HDAC3-203ENST00000467533 LARP1BQ659C4 914 aaKnown RBP11.24□□□□□ -0.61
HDAC3-203ENST00000467533 TRIM68Q6AZZ1 485 aa11.24□□□□□ -0.61
HDAC3-203ENST00000467533 CCNI2Q6ZMN8 369 aaPredicted RBP11.24□□□□□ -0.61
HDAC3-203ENST00000467533 LPCAT2Q7L5N7 544 aa11.24□□□□□ -0.61
HDAC3-203ENST00000467533 ZNF605Q86T29 641 aa11.24□□□□□ -0.61
HDAC3-203ENST00000467533 TTC30AQ86WT1 665 aa11.24□□□□□ -0.61
HDAC3-203ENST00000467533 ADAMTS14Q8WXS8 1223 aa11.24□□□□□ -0.61
HDAC3-203ENST00000467533 CHFRQ96EP1 664 aa11.24□□□□□ -0.61
HDAC3-203ENST00000467533 PGLYRP2Q96PD5 576 aa11.24□□□□□ -0.61
HDAC3-203ENST00000467533 P2RY13Q9BPV8 354 aa11.24□□□□□ -0.61
HDAC3-203ENST00000467533 LSG1Q9H089 658 aaKnown RBP11.24□□□□□ -0.61
HDAC3-203ENST00000467533 SMG9Q9H0W8 520 aaKnown RBP11.24□□□□□ -0.61
HDAC3-203ENST00000467533 DNAJC25Q9H1X3 360 aa11.24□□□□□ -0.61
HDAC3-203ENST00000467533 FBRSL1Q9HCM7 1045 aaKnown RBP11.24□□□□□ -0.61
HDAC3-203ENST00000467533 RAI2Q9Y5P3 530 aa11.24□□□□□ -0.61
HDAC3-203ENST00000467533 ZNF638Q14966 1978 aaKnown RBP11.24□□□□□ -0.61
HDAC3-203ENST00000467533 PTPRDP23468 1912 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 PTPRBP23467 1997 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 MARCH6O60337 910 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 USO1O60763 962 aaKnown RBP11.23□□□□□ -0.61
HDAC3-203ENST00000467533 FGF19O95750 216 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 IGHDP01880 384 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 FTH1P19P0C7X4 201 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 MCM4P33991 863 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 ALDH1A3P47895 512 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 SOX4Q06945 474 aaPredicted RBP11.23□□□□□ -0.61
HDAC3-203ENST00000467533 FAM187BQ17R55 369 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 EEF1DP3Q658K8 133 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 CDCA2Q69YH5 1023 aaPredicted RBP11.23□□□□□ -0.61
HDAC3-203ENST00000467533 NAIF1Q69YI7 327 aaPredicted RBP11.23□□□□□ -0.61
HDAC3-203ENST00000467533 SLC23A3Q6PIS1 610 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 GAREM2Q75VX8 874 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 MAEAQ7L5Y9 396 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 SYT12Q8IV01 421 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 TPH2Q8IWU9 490 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 TMEFF1Q8IYR6 380 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 PNPLA1Q8N8W4 532 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 SPACA7Q96KW9 195 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 CNOT6LQ96LI5 555 aaKnown RBP11.23□□□□□ -0.61
HDAC3-203ENST00000467533 FAM20AQ96MK3 541 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 GCNAQ96QF7 691 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 SLC26A6Q9BXS9 759 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 FZD8Q9H461 694 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 TMEM74BQ9NUR3 256 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 USP20Q9Y2K6 914 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 PCDHB9Q9Y5E1 797 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 KALRNO60229 2985 aa11.23□□□□□ -0.61
HDAC3-203ENST00000467533 OTOL1A6NHN0 477 aaPredicted RBP11.22□□□□□ -0.61
HDAC3-203ENST00000467533 TK2O00142 265 aa11.22□□□□□ -0.61
HDAC3-203ENST00000467533 TNFRSF10BO14763 440 aa11.22□□□□□ -0.61
HDAC3-203ENST00000467533 MAP3K13O43283 966 aa11.22□□□□□ -0.61
HDAC3-203ENST00000467533 OR4Q2P0C623 313 aa11.22□□□□□ -0.61
HDAC3-203ENST00000467533 ARSAP15289 507 aa11.22□□□□□ -0.61
HDAC3-203ENST00000467533 DPP6P42658 865 aa11.22□□□□□ -0.61
HDAC3-203ENST00000467533 PTGER3P43115 390 aa11.22□□□□□ -0.61
HDAC3-203ENST00000467533 GALK1P51570 392 aa11.22□□□□□ -0.61
HDAC3-203ENST00000467533 ACACAQ13085 2346 aa11.22□□□□□ -0.61
HDAC3-203ENST00000467533 DUSP4Q13115 394 aa11.22□□□□□ -0.61
HDAC3-203ENST00000467533 NECTIN1Q15223 517 aa11.22□□□□□ -0.61
HDAC3-203ENST00000467533 TRIP6Q15654 476 aaKnown RBP11.22□□□□□ -0.61
HDAC3-203ENST00000467533 LYSMD4Q5XG99 296 aa11.22□□□□□ -0.61
HDAC3-203ENST00000467533 LMBRD2Q68DH5 695 aaPredicted RBP11.22□□□□□ -0.61
HDAC3-203ENST00000467533 DHX32Q7L7V1 743 aaKnown RBP11.22□□□□□ -0.61
HDAC3-203ENST00000467533 MINDY1Q8N5J2 469 aa11.22□□□□□ -0.61
HDAC3-203ENST00000467533 APPL2Q8NEU8 664 aa11.22□□□□□ -0.61
HDAC3-203ENST00000467533 MDGA1Q8NFP4 955 aa11.22□□□□□ -0.61
HDAC3-203ENST00000467533 DDX12PQ92771 950 aa11.22□□□□□ -0.61
HDAC3-203ENST00000467533 CAMK1GQ96NX5 476 aa11.22□□□□□ -0.61
HDAC3-203ENST00000467533 PCDH15Q96QU1 1955 aa11.22□□□□□ -0.61
HDAC3-203ENST00000467533 FAM83CQ9BQN1 747 aa11.22□□□□□ -0.61
HDAC3-203ENST00000467533 RNF26Q9BY78 433 aaPredicted RBP11.22□□□□□ -0.61
HDAC3-203ENST00000467533 C2orf40Q9H1Z8 148 aa11.22□□□□□ -0.61
HDAC3-203ENST00000467533 TASP1Q9H6P5 420 aa11.22□□□□□ -0.61
HDAC3-203ENST00000467533 KCNMB3Q9NPA1 279 aa11.22□□□□□ -0.61
HDAC3-203ENST00000467533 GPRC5CQ9NQ84 441 aa11.22□□□□□ -0.61
HDAC3-203ENST00000467533 SLC38A7Q9NVC3 462 aa11.22□□□□□ -0.61
HDAC3-203ENST00000467533 PCDHA4Q9UN74 947 aa11.22□□□□□ -0.61
HDAC3-203ENST00000467533 CEP192Q8TEP8 1941 aa11.21□□□□□ -0.61
HDAC3-203ENST00000467533 PLXND1Q9Y4D7 1925 aa11.21□□□□□ -0.61
HDAC3-203ENST00000467533 SMIM28A0A1B0GU29 152 aa11.21□□□□□ -0.61
HDAC3-203ENST00000467533 ATXN7O15265 892 aaPredicted RBP11.21□□□□□ -0.61
HDAC3-203ENST00000467533 WEE1P30291 646 aa11.21□□□□□ -0.61
HDAC3-203ENST00000467533 ABCG1P45844 678 aa11.21□□□□□ -0.61
HDAC3-203ENST00000467533 YARSP54577 528 aaKnown RBP11.21□□□□□ -0.61
HDAC3-203ENST00000467533 EXOSC10Q01780 885 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms