RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 NETO1Q8TDF5 533 aa17.12■□□□□ 0.33
TSSC4-208ENST00000467308 DDX12PQ92771 950 aa17.12■□□□□ 0.33
TSSC4-208ENST00000467308 C18orf25Q96B23 403 aaPredicted RBP17.12■□□□□ 0.33
TSSC4-208ENST00000467308 DRC1Q96MC2 740 aa17.12■□□□□ 0.33
TSSC4-208ENST00000467308 TCHPQ9BT92 498 aa17.12■□□□□ 0.33
TSSC4-208ENST00000467308 TARS2Q9BW92 718 aaKnown RBP17.12■□□□□ 0.33
TSSC4-208ENST00000467308 OXCT2Q9BYC2 517 aaPredicted RBP17.12■□□□□ 0.33
TSSC4-208ENST00000467308 KMT5AQ9NQR1 393 aa17.12■□□□□ 0.33
TSSC4-208ENST00000467308 DDX19AQ9NUU7 478 aaKnown RBP17.12■□□□□ 0.33
TSSC4-208ENST00000467308 PCDHB8Q9UN66 801 aa17.12■□□□□ 0.33
TSSC4-208ENST00000467308 FAM237AA0A1B0GTK4 181 aa17.11■□□□□ 0.33
TSSC4-208ENST00000467308 GOLGA6L4A6NEF3 574 aa17.11■□□□□ 0.33
TSSC4-208ENST00000467308 MEFVO15553 781 aaPredicted RBP17.11■□□□□ 0.33
TSSC4-208ENST00000467308 HIP1RO75146 1068 aa17.11■□□□□ 0.33
TSSC4-208ENST00000467308 PAPSS2O95340 614 aaPredicted RBP17.11■□□□□ 0.33
TSSC4-208ENST00000467308 MYL4P12829 197 aa17.11■□□□□ 0.33
TSSC4-208ENST00000467308 CMA1P23946 247 aa17.11■□□□□ 0.33
TSSC4-208ENST00000467308 CCNE1P24864 410 aa17.11■□□□□ 0.33
TSSC4-208ENST00000467308 MARCKSP29966 332 aaPredicted RBP17.11■□□□□ 0.33
TSSC4-208ENST00000467308 CNR2P34972 360 aa17.11■□□□□ 0.33
TSSC4-208ENST00000467308 SPEM1Q8N4L4 309 aa17.11■□□□□ 0.33
TSSC4-208ENST00000467308 RAB34Q9BZG1 259 aa17.11■□□□□ 0.33
TSSC4-208ENST00000467308 DNM3Q9UQ16 869 aa17.11■□□□□ 0.33
TSSC4-208ENST00000467308 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.11■□□□□ 0.33
TSSC4-208ENST00000467308 MAP1BP46821 2468 aaKnown RBP17.11■□□□□ 0.33
TSSC4-208ENST00000467308 HEPACAM2A8MVW5 462 aa17.1■□□□□ 0.33
TSSC4-208ENST00000467308 SLC30A4O14863 429 aa17.1■□□□□ 0.33
TSSC4-208ENST00000467308 CHADO15335 359 aa17.1■□□□□ 0.33
TSSC4-208ENST00000467308 GADD45BO75293 160 aaPredicted RBP17.1■□□□□ 0.33
TSSC4-208ENST00000467308 KRT37O76014 449 aa17.1■□□□□ 0.33
TSSC4-208ENST00000467308 OAZ2O95190 189 aa17.1■□□□□ 0.33
TSSC4-208ENST00000467308 ADRB1P08588 477 aa17.1■□□□□ 0.33
TSSC4-208ENST00000467308 CPB1P15086 417 aa17.1■□□□□ 0.33
TSSC4-208ENST00000467308 LONP1P36776 959 aaKnown RBP17.1■□□□□ 0.33
TSSC4-208ENST00000467308 SATB1Q01826 763 aa17.1■□□□□ 0.33
TSSC4-208ENST00000467308 PLD1Q13393 1074 aa17.1■□□□□ 0.33
TSSC4-208ENST00000467308 LRRC32Q14392 662 aa17.1■□□□□ 0.33
TSSC4-208ENST00000467308 GAS6Q14393 721 aa17.1■□□□□ 0.33
TSSC4-208ENST00000467308 TEAD2Q15562 447 aa17.1■□□□□ 0.33
TSSC4-208ENST00000467308 LPAL2Q16609 132 aa17.1■□□□□ 0.33
TSSC4-208ENST00000467308 RNF19BQ6ZMZ0 732 aa17.1■□□□□ 0.33
TSSC4-208ENST00000467308 PRR23BQ6ZRT6 265 aa17.1■□□□□ 0.33
TSSC4-208ENST00000467308 IGSF22Q8N9C0 903 aa17.1■□□□□ 0.33
TSSC4-208ENST00000467308 CSGALNACT1Q8TDX6 532 aa17.1■□□□□ 0.33
TSSC4-208ENST00000467308 NTPCRQ9BSD7 190 aaKnown RBP17.1■□□□□ 0.33
TSSC4-208ENST00000467308 C8orf33Q9H7E9 229 aaPredicted RBP17.1■□□□□ 0.33
TSSC4-208ENST00000467308 KCNG1Q9UIX4 513 aa17.1■□□□□ 0.33
TSSC4-208ENST00000467308 NCANO14594 1321 aa17.1■□□□□ 0.33
TSSC4-208ENST00000467308 CHD8Q9HCK8 2581 aa17.1■□□□□ 0.33
TSSC4-208ENST00000467308 M0QZQ0 153 aa17.09■□□□□ 0.33
TSSC4-208ENST00000467308 FOXD2O60548 495 aaPredicted RBP17.09■□□□□ 0.33
TSSC4-208ENST00000467308 TOM1L1O75674 476 aa17.09■□□□□ 0.33
TSSC4-208ENST00000467308 GJA1P17302 382 aa17.09■□□□□ 0.33
TSSC4-208ENST00000467308 YWHAHQ04917 246 aaPredicted RBP17.09■□□□□ 0.33
TSSC4-208ENST00000467308 FCHO2Q0JRZ9 810 aa17.09■□□□□ 0.33
TSSC4-208ENST00000467308 MAPK7Q13164 816 aa17.09■□□□□ 0.33
TSSC4-208ENST00000467308 SIM2Q14190 667 aaPredicted RBP17.09■□□□□ 0.33
TSSC4-208ENST00000467308 CSRP2Q16527 193 aa17.09■□□□□ 0.33
TSSC4-208ENST00000467308 KLHL40Q2TBA0 621 aa17.09■□□□□ 0.33
TSSC4-208ENST00000467308 SLC10A6Q3KNW5 377 aa17.09■□□□□ 0.33
TSSC4-208ENST00000467308 DTHD1Q6ZMT9 781 aa17.09■□□□□ 0.33
TSSC4-208ENST00000467308 SHKBP1Q8TBC3 707 aa17.09■□□□□ 0.33
TSSC4-208ENST00000467308 SNX29Q8TEQ0 813 aa17.09■□□□□ 0.33
TSSC4-208ENST00000467308 AK8Q96MA6 479 aa17.09■□□□□ 0.33
TSSC4-208ENST00000467308 TIPINQ9BVW5 301 aa17.09■□□□□ 0.33
TSSC4-208ENST00000467308 LRRC3Q9BY71 257 aa17.09■□□□□ 0.33
TSSC4-208ENST00000467308 SLITRK6Q9H5Y7 841 aa17.09■□□□□ 0.33
TSSC4-208ENST00000467308 YIPF1Q9Y548 306 aa17.09■□□□□ 0.33
TSSC4-208ENST00000467308 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.09■□□□□ 0.33
TSSC4-208ENST00000467308 MYH11P35749 1972 aa17.09■□□□□ 0.33
TSSC4-208ENST00000467308 CNOT1A5YKK6 2376 aaKnown RBP17.08■□□□□ 0.33
TSSC4-208ENST00000467308 E9PMD0 336 aa17.08■□□□□ 0.32
TSSC4-208ENST00000467308 STRN3Q13033 797 aa17.08■□□□□ 0.32
TSSC4-208ENST00000467308 NOLC1Q14978 699 aaKnown RBP eCLIP17.08■□□□□ 0.32
TSSC4-208ENST00000467308 IL17AQ16552 155 aa17.08■□□□□ 0.32
TSSC4-208ENST00000467308 DGKKQ5KSL6 1271 aa17.08■□□□□ 0.32
TSSC4-208ENST00000467308 RESP18Q5W5W9 173 aa17.08■□□□□ 0.32
TSSC4-208ENST00000467308 RINT1Q6NUQ1 792 aa17.08■□□□□ 0.32
TSSC4-208ENST00000467308 C1orf186Q6ZWK4 172 aa17.08■□□□□ 0.32
TSSC4-208ENST00000467308 LONP2Q86WA8 852 aa17.08■□□□□ 0.32
TSSC4-208ENST00000467308 TMC8Q8IU68 726 aa17.08■□□□□ 0.32
TSSC4-208ENST00000467308 YAF2Q8IY57 180 aa17.08■□□□□ 0.32
TSSC4-208ENST00000467308 SPIRE2Q8WWL2 714 aa17.08■□□□□ 0.32
TSSC4-208ENST00000467308 RUSC1Q9BVN2 902 aa17.08■□□□□ 0.32
TSSC4-208ENST00000467308 PLEKHA5Q9HAU0 1116 aa17.08■□□□□ 0.32
TSSC4-208ENST00000467308 SEMA4GQ9NTN9 838 aa17.08■□□□□ 0.32
TSSC4-208ENST00000467308 TUBGCP4Q9UGJ1 667 aa17.08■□□□□ 0.32
TSSC4-208ENST00000467308 NUP210Q8TEM1 1887 aaPredicted RBP17.07■□□□□ 0.32
TSSC4-208ENST00000467308 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.07■□□□□ 0.32
TSSC4-208ENST00000467308 K7ESF4 209 aa17.07■□□□□ 0.32
TSSC4-208ENST00000467308 SLC16A4O15374 487 aa17.07■□□□□ 0.32
TSSC4-208ENST00000467308 HRO43593 1189 aa17.07■□□□□ 0.32
TSSC4-208ENST00000467308 VNN2O95498 520 aa17.07■□□□□ 0.32
TSSC4-208ENST00000467308 HARSP12081 509 aaKnown RBP17.07■□□□□ 0.32
TSSC4-208ENST00000467308 GUCY2CP25092 1073 aa17.07■□□□□ 0.32
TSSC4-208ENST00000467308 LRPAP1P30533 357 aa17.07■□□□□ 0.32
TSSC4-208ENST00000467308 HOXA6P31267 233 aa17.07■□□□□ 0.32
TSSC4-208ENST00000467308 AARSP49588 968 aaKnown RBP eCLIP17.07■□□□□ 0.32
TSSC4-208ENST00000467308 EPHB3P54753 998 aa17.07■□□□□ 0.32
TSSC4-208ENST00000467308 KRT79Q5XKE5 535 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms