RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 TSC2P49815 1807 aa13.91□□□□□ -0.18
COL4A1-202ENST00000467182 TTC3P53804 2025 aa13.91□□□□□ -0.18
COL4A1-202ENST00000467182 PJA2O43164 708 aa13.9□□□□□ -0.18
COL4A1-202ENST00000467182 B4GALT3O60512 393 aa13.9□□□□□ -0.18
COL4A1-202ENST00000467182 CILPO75339 1184 aa13.9□□□□□ -0.18
COL4A1-202ENST00000467182 POMCP01189 267 aa13.9□□□□□ -0.18
COL4A1-202ENST00000467182 MMEP08473 750 aa13.9□□□□□ -0.18
COL4A1-202ENST00000467182 FGFR1P11362 822 aa13.9□□□□□ -0.18
COL4A1-202ENST00000467182 IBSPP21815 317 aaPredicted RBP13.9□□□□□ -0.18
COL4A1-202ENST00000467182 PNPLA4P41247 253 aa13.9□□□□□ -0.18
COL4A1-202ENST00000467182 TAF6P49848 677 aa13.9□□□□□ -0.18
COL4A1-202ENST00000467182 VAV2P52735 878 aa13.9□□□□□ -0.18
COL4A1-202ENST00000467182 LILRA4P59901 499 aa13.9□□□□□ -0.18
COL4A1-202ENST00000467182 KRT83P78385 493 aa13.9□□□□□ -0.18
COL4A1-202ENST00000467182 CDR2Q01850 454 aa13.9□□□□□ -0.18
COL4A1-202ENST00000467182 MYO1EQ12965 1108 aa13.9□□□□□ -0.18
COL4A1-202ENST00000467182 CNKSR3Q6P9H4 555 aa13.9□□□□□ -0.18
COL4A1-202ENST00000467182 DEFB128Q7Z7B8 93 aa13.9□□□□□ -0.18
COL4A1-202ENST00000467182 GLYCTKQ8IVS8 523 aa13.9□□□□□ -0.18
COL4A1-202ENST00000467182 RPUSD2Q8IZ73 545 aaKnown RBP13.9□□□□□ -0.18
COL4A1-202ENST00000467182 C3orf58Q8NDZ4 430 aa13.9□□□□□ -0.18
COL4A1-202ENST00000467182 ZNF560Q96MR9 790 aa13.9□□□□□ -0.18
COL4A1-202ENST00000467182 PAAF1Q9BRP4 392 aa13.9□□□□□ -0.18
COL4A1-202ENST00000467182 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.9□□□□□ -0.18
COL4A1-202ENST00000467182 ELOVL4Q9GZR5 314 aa13.9□□□□□ -0.18
COL4A1-202ENST00000467182 LACRTQ9GZZ8 138 aa13.9□□□□□ -0.18
COL4A1-202ENST00000467182 FAM124BQ9H5Z6 455 aaPredicted RBP13.9□□□□□ -0.18
COL4A1-202ENST00000467182 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.9□□□□□ -0.18
COL4A1-202ENST00000467182 FNDC1Q4ZHG4 1894 aaPredicted RBP13.9□□□□□ -0.18
COL4A1-202ENST00000467182 ATP8B3O60423 1300 aa13.9□□□□□ -0.19
COL4A1-202ENST00000467182 CASTOR2A6NHX0 329 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 KPNA7A9QM74 516 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 PODXLO00592 558 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 CCP110O43303 1012 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 DDHD2O94830 711 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 CLSTN1O94985 981 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 CFHP08603 1231 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 P4HA1P13674 534 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 TNFAIP3P21580 790 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 MAGEA1P43355 309 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 PDE6CP51160 858 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 CLCNKBP51801 687 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 RAD23BP54727 409 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 BPIFB4P59827 614 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 YWHAEP62258 255 aaKnown RBP13.89□□□□□ -0.19
COL4A1-202ENST00000467182 TNNC1P63316 161 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 DSC1Q08554 894 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 UPP1Q16831 310 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 SOWAHAQ2M3V2 549 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 SV2CQ496J9 727 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 TAF3Q5VWG9 929 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 DNAAF5Q86Y56 855 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 SLC4A11Q8NBS3 891 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 KBTBD7Q8WVZ9 684 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 MRPL45Q9BRJ2 306 aaKnown RBP13.89□□□□□ -0.19
COL4A1-202ENST00000467182 PACSIN1Q9BY11 444 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 TAS2R14Q9NYV8 317 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 PCDH10Q9P2E7 1040 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 INPP5FQ9Y2H2 1132 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 SNX9Q9Y5X1 595 aa13.89□□□□□ -0.19
COL4A1-202ENST00000467182 PTPRSQ13332 1948 aa13.88□□□□□ -0.19
COL4A1-202ENST00000467182 GOLGA6L9A6NEM1 432 aa13.88□□□□□ -0.19
COL4A1-202ENST00000467182 TACC1O75410 805 aa13.88□□□□□ -0.19
COL4A1-202ENST00000467182 GNA15P30679 374 aa13.88□□□□□ -0.19
COL4A1-202ENST00000467182 RPL9P32969 192 aaKnown RBP13.88□□□□□ -0.19
COL4A1-202ENST00000467182 AARSP49588 968 aaKnown RBP eCLIP13.88□□□□□ -0.19
COL4A1-202ENST00000467182 GATMP50440 423 aa13.88□□□□□ -0.19
COL4A1-202ENST00000467182 TUSC3Q13454 348 aa13.88□□□□□ -0.19
COL4A1-202ENST00000467182 SPA17Q15506 151 aa13.88□□□□□ -0.19
COL4A1-202ENST00000467182 NOMO2Q5JPE7 1267 aa13.88□□□□□ -0.19
COL4A1-202ENST00000467182 CCDC122Q5T0U0 273 aa13.88□□□□□ -0.19
COL4A1-202ENST00000467182 MFSD5Q6N075 450 aa13.88□□□□□ -0.19
COL4A1-202ENST00000467182 ALKBH5Q6P6C2 394 aaKnown RBP13.88□□□□□ -0.19
COL4A1-202ENST00000467182 GLB1LQ6UWU2 654 aa13.88□□□□□ -0.19
COL4A1-202ENST00000467182 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.88□□□□□ -0.19
COL4A1-202ENST00000467182 VPS36Q86VN1 386 aa13.88□□□□□ -0.19
COL4A1-202ENST00000467182 ZNF677Q86XU0 584 aa13.88□□□□□ -0.19
COL4A1-202ENST00000467182 ZNF280BQ86YH2 543 aa13.88□□□□□ -0.19
COL4A1-202ENST00000467182 TFAP2BQ92481 460 aa13.88□□□□□ -0.19
COL4A1-202ENST00000467182 CASD1Q96PB1 797 aa13.88□□□□□ -0.19
COL4A1-202ENST00000467182 TBC1D13Q9NVG8 400 aa13.88□□□□□ -0.19
COL4A1-202ENST00000467182 TRIM10Q9UDY6 481 aa13.88□□□□□ -0.19
COL4A1-202ENST00000467182 BARX2Q9UMQ3 279 aaPredicted RBP13.88□□□□□ -0.19
COL4A1-202ENST00000467182 L1RE1Q9UN81 338 aa13.88□□□□□ -0.19
COL4A1-202ENST00000467182 R3HCC1Q9Y3T6 440 aaKnown RBP13.88□□□□□ -0.19
COL4A1-202ENST00000467182 CYP1A1P04798 512 aaPredicted RBP13.87□□□□□ -0.19
COL4A1-202ENST00000467182 PAEPP09466 180 aa13.87□□□□□ -0.19
COL4A1-202ENST00000467182 UNGP13051 313 aaPredicted RBP13.87□□□□□ -0.19
COL4A1-202ENST00000467182 CSF2RAP15509 400 aa13.87□□□□□ -0.19
COL4A1-202ENST00000467182 NDST1P52848 882 aa13.87□□□□□ -0.19
COL4A1-202ENST00000467182 ORC1Q13415 861 aa13.87□□□□□ -0.19
COL4A1-202ENST00000467182 ZNF394Q53GI3 561 aa13.87□□□□□ -0.19
COL4A1-202ENST00000467182 C10orf76Q5T2E6 689 aa13.87□□□□□ -0.19
COL4A1-202ENST00000467182 OSTM1Q86WC4 334 aa13.87□□□□□ -0.19
COL4A1-202ENST00000467182 NPAS4Q8IUM7 802 aa13.87□□□□□ -0.19
COL4A1-202ENST00000467182 COLGALT2Q8IYK4 626 aa13.87□□□□□ -0.19
COL4A1-202ENST00000467182 TOP6BLQ8N6T0 577 aa13.87□□□□□ -0.19
COL4A1-202ENST00000467182 ZNF606Q8WXB4 792 aa13.87□□□□□ -0.19
COL4A1-202ENST00000467182 RABGGTAQ92696 567 aa13.87□□□□□ -0.19
COL4A1-202ENST00000467182 TMEM176AQ96HP8 235 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms