RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 DESI2Q9BSY9 194 aa10.74□□□□□ -0.69
PMF1-204ENST00000466489 COLEC11Q9BWP8 271 aa10.74□□□□□ -0.69
PMF1-204ENST00000466489 ASB7Q9H672 318 aa10.74□□□□□ -0.69
PMF1-204ENST00000466489 AGPAT3Q9NRZ7 376 aa10.74□□□□□ -0.69
PMF1-204ENST00000466489 RNF19AQ9NV58 838 aa10.74□□□□□ -0.69
PMF1-204ENST00000466489 TAB2Q9NYJ8 693 aa10.74□□□□□ -0.69
PMF1-204ENST00000466489 RBAKQ9NYW8 714 aaPredicted RBP10.74□□□□□ -0.69
PMF1-204ENST00000466489 SPG21Q9NZD8 308 aa10.74□□□□□ -0.69
PMF1-204ENST00000466489 HSPBP1Q9NZL4 362 aa10.74□□□□□ -0.69
PMF1-204ENST00000466489 GUCA1BQ9UMX6 200 aa10.74□□□□□ -0.69
PMF1-204ENST00000466489 FRMD4BQ9Y2L6 1034 aa10.74□□□□□ -0.69
PMF1-204ENST00000466489 COL4A4P53420 1690 aaPredicted RBP10.73□□□□□ -0.69
PMF1-204ENST00000466489 BTNL10A8MVZ5 291 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 TISP43B9A030 160 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 C5orf67F2Z3F1 127 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 POLR3GO15318 223 aaPredicted RBP10.73□□□□□ -0.69
PMF1-204ENST00000466489 PJA2O43164 708 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 LPXNO60711 386 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 KCNE1P15382 129 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 ARHGAP25P42331 645 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 TNNT3P45378 269 aaPredicted RBP10.73□□□□□ -0.69
PMF1-204ENST00000466489 OR1G1P47890 313 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 ACOT2P49753 483 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 CYP2J2P51589 502 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 BCAR1P56945 870 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 UBE3AQ05086 875 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 MAPK8IP2Q13387 824 aaPredicted RBP10.73□□□□□ -0.69
PMF1-204ENST00000466489 TUSC3Q13454 348 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 GPM6BQ13491 265 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 MYBPC2Q14324 1141 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 DNAJC21Q5F1R6 531 aaKnown RBP10.73□□□□□ -0.69
PMF1-204ENST00000466489 B4GALNT4Q76KP1 1039 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 C12orf56Q8IXR9 622 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 ARFGAP2Q8N6H7 521 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 CEP120Q8N960 986 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 GLIS3Q8NEA6 775 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 SAAL1Q96ER3 474 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 DDX27Q96GQ7 796 aaKnown RBP10.73□□□□□ -0.69
PMF1-204ENST00000466489 MED15Q96RN5 788 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 FNBP1Q96RU3 617 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 CBWD1Q9BRT8 395 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 C17orf80Q9BSJ5 609 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 LMAN2LQ9H0V9 348 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 NDST4Q9H3R1 872 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 SEMA6BQ9H3T3 888 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 PCIF1Q9H4Z3 704 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 ANKZF1Q9H8Y5 726 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 CERS4Q9HA82 394 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 METTL14Q9HCE5 456 aaKnown RBP10.73□□□□□ -0.69
PMF1-204ENST00000466489 CNTN3Q9P232 1028 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 CPSF3Q9UKF6 684 aaKnown RBP10.73□□□□□ -0.69
PMF1-204ENST00000466489 UBQLN1Q9UMX0 589 aaKnown RBP10.73□□□□□ -0.69
PMF1-204ENST00000466489 SNX12Q9UMY4 172 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 MAPK8IP1Q9UQF2 711 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 FAN1Q9Y2M0 1017 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 DERAQ9Y315 318 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 HYOU1Q9Y4L1 999 aa10.73□□□□□ -0.69
PMF1-204ENST00000466489 SMIM28A0A1B0GU29 152 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 GOLGA6BA6NDN3 693 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 H3BNC9 293 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 CLIC2O15247 247 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 TGFB1I1O43294 461 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 TRAPPC3O43617 180 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 NR3C1P04150 777 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 SERPING1P05155 500 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 EPB41P11171 864 aaKnown RBP10.72□□□□□ -0.69
PMF1-204ENST00000466489 CYP3A5P20815 502 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 NR2F2P24468 414 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 ADSSP30520 456 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 GBP1P32455 592 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 TNFSF9P41273 254 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 MARSP56192 900 aaKnown RBP10.72□□□□□ -0.69
PMF1-204ENST00000466489 ELAVL2Q12926 359 aaKnown RBP10.72□□□□□ -0.69
PMF1-204ENST00000466489 TMEM132DQ14C87 1099 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 ENOX2Q16206 610 aaKnown RBP10.72□□□□□ -0.69
PMF1-204ENST00000466489 SNRNP35Q16560 246 aaKnown RBP10.72□□□□□ -0.69
PMF1-204ENST00000466489 EDRF1Q3B7T1 1238 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 SLC10A6Q3KNW5 377 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 SEZ6Q53EL9 994 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 GLRA4Q5JXX5 417 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 CCNI2Q6ZMN8 369 aaPredicted RBP10.72□□□□□ -0.69
PMF1-204ENST00000466489 SLC9A9Q8IVB4 645 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 BRSK2Q8IWQ3 736 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 SMYD4Q8IYR2 804 aaPredicted RBP10.72□□□□□ -0.69
PMF1-204ENST00000466489 C3orf20Q8ND61 904 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 BEST2Q8NFU1 509 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 PPM1EQ8WY54 764 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 KIF12Q96FN5 646 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 CNOT6LQ96LI5 555 aaKnown RBP10.72□□□□□ -0.69
PMF1-204ENST00000466489 FAM161BQ96MY7 647 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 NAP1L3Q99457 506 aaPredicted RBP10.72□□□□□ -0.69
PMF1-204ENST00000466489 SELENOOQ9BVL4 669 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 HAPLN2Q9GZV7 340 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 CWH43Q9H720 699 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 NRDE2Q9H7Z3 1164 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 CEP72Q9P209 647 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 TRAF3IP3Q9Y228 551 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 LZTS1Q9Y250 596 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 C2CD2Q9Y426 696 aa10.72□□□□□ -0.69
PMF1-204ENST00000466489 LAMA3Q16787 3333 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms