RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 THAP12O43422 761 aa12.96□□□□□ -0.33
VPS16-206ENST00000466415 UPP2O95045 317 aa12.96□□□□□ -0.33
VPS16-206ENST00000466415 PAX3P23760 479 aa12.96□□□□□ -0.33
VPS16-206ENST00000466415 CLCN1P35523 988 aa12.96□□□□□ -0.33
VPS16-206ENST00000466415 CDH8P55286 799 aa12.96□□□□□ -0.33
VPS16-206ENST00000466415 GFPT1Q06210 699 aaPredicted RBP12.96□□□□□ -0.33
VPS16-206ENST00000466415 NAB2Q15742 525 aa12.96□□□□□ -0.33
VPS16-206ENST00000466415 SLC18A3Q16572 532 aa12.96□□□□□ -0.33
VPS16-206ENST00000466415 ZNF394Q53GI3 561 aa12.96□□□□□ -0.33
VPS16-206ENST00000466415 DSTYKQ6XUX3 929 aa12.96□□□□□ -0.33
VPS16-206ENST00000466415 SLC47A2Q86VL8 602 aa12.96□□□□□ -0.33
VPS16-206ENST00000466415 ZNF677Q86XU0 584 aa12.96□□□□□ -0.33
VPS16-206ENST00000466415 CCAR2Q8N163 923 aaKnown RBP12.96□□□□□ -0.33
VPS16-206ENST00000466415 C17orf53Q8N3J3 647 aaPredicted RBP12.96□□□□□ -0.33
VPS16-206ENST00000466415 APPL2Q8NEU8 664 aa12.96□□□□□ -0.33
VPS16-206ENST00000466415 EPS8L1Q8TE68 723 aa12.96□□□□□ -0.33
VPS16-206ENST00000466415 SLC20A1Q8WUM9 679 aa12.96□□□□□ -0.33
VPS16-206ENST00000466415 SDCBP2Q9H190 292 aa12.96□□□□□ -0.33
VPS16-206ENST00000466415 IL23AQ9NPF7 189 aa12.96□□□□□ -0.33
VPS16-206ENST00000466415 TBC1D13Q9NVG8 400 aa12.96□□□□□ -0.33
VPS16-206ENST00000466415 ADAMTS1Q9UHI8 967 aa12.96□□□□□ -0.33
VPS16-206ENST00000466415 ARHGEF37A1IGU5 675 aa12.95□□□□□ -0.34
VPS16-206ENST00000466415 TBKBP1A7MCY6 615 aa12.95□□□□□ -0.34
VPS16-206ENST00000466415 BAIAP3O94812 1187 aa12.95□□□□□ -0.34
VPS16-206ENST00000466415 ACRP10323 421 aa12.95□□□□□ -0.34
VPS16-206ENST00000466415 CD19P15391 556 aa12.95□□□□□ -0.34
VPS16-206ENST00000466415 ITGB8P26012 769 aa12.95□□□□□ -0.34
VPS16-206ENST00000466415 MAGEA1P43355 309 aa12.95□□□□□ -0.34
VPS16-206ENST00000466415 OR1G1P47890 313 aa12.95□□□□□ -0.34
VPS16-206ENST00000466415 ZNF132P52740 706 aa12.95□□□□□ -0.34
VPS16-206ENST00000466415 LILRA4P59901 499 aa12.95□□□□□ -0.34
VPS16-206ENST00000466415 CDR2Q01850 454 aa12.95□□□□□ -0.34
VPS16-206ENST00000466415 FPGSQ05932 587 aa12.95□□□□□ -0.34
VPS16-206ENST00000466415 UPP1Q16831 310 aa12.95□□□□□ -0.34
VPS16-206ENST00000466415 ARHGAP29Q52LW3 1261 aa12.95□□□□□ -0.34
VPS16-206ENST00000466415 CCDC122Q5T0U0 273 aa12.95□□□□□ -0.34
VPS16-206ENST00000466415 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.95□□□□□ -0.34
VPS16-206ENST00000466415 NOP9Q86U38 636 aaKnown RBP12.95□□□□□ -0.34
VPS16-206ENST00000466415 GLYCTKQ8IVS8 523 aa12.95□□□□□ -0.34
VPS16-206ENST00000466415 ADGRF2Q8IZF7 708 aa12.95□□□□□ -0.34
VPS16-206ENST00000466415 LRRC43Q8N309 656 aa12.95□□□□□ -0.34
VPS16-206ENST00000466415 TOP6BLQ8N6T0 577 aa12.95□□□□□ -0.34
VPS16-206ENST00000466415 OR6B3Q8NGW1 331 aa12.95□□□□□ -0.34
VPS16-206ENST00000466415 PPP1R13BQ96KQ4 1090 aa12.95□□□□□ -0.34
VPS16-206ENST00000466415 SNX25Q9H3E2 840 aa12.95□□□□□ -0.34
VPS16-206ENST00000466415 GDAP2Q9NXN4 497 aa12.95□□□□□ -0.34
VPS16-206ENST00000466415 CACNG4Q9UBN1 327 aa12.95□□□□□ -0.34
VPS16-206ENST00000466415 NOCTQ9UK39 431 aaKnown RBP12.95□□□□□ -0.34
VPS16-206ENST00000466415 BARX2Q9UMQ3 279 aaPredicted RBP12.95□□□□□ -0.34
VPS16-206ENST00000466415 CNTN6Q9UQ52 1028 aa12.95□□□□□ -0.34
VPS16-206ENST00000466415 BRCA2P51587 3418 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 A0A087X0T9 212 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 ZBBXA8MT70 800 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 CYB561D2O14569 222 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 SPTLC1O15269 473 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 MED7O43513 233 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 CILPO75339 1184 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 B3GAT3O94766 335 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 LCA5LO95447 670 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 PAEPP09466 180 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 FAM228BP0C875 321 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 ODC1P11926 461 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 GATMP50440 423 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 VAV2P52735 878 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 NDST1P52848 882 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 CYP27A1Q02318 531 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 INCA1Q0VD86 236 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 ASTE1Q2TB18 679 aaPredicted RBP12.94□□□□□ -0.34
VPS16-206ENST00000466415 PAN2Q504Q3 1202 aaKnown RBP12.94□□□□□ -0.34
VPS16-206ENST00000466415 C10orf76Q5T2E6 689 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 DCLRE1AQ6PJP8 1040 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 METTL23Q86XA0 190 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 LNX1Q8TBB1 728 aaPredicted RBP12.94□□□□□ -0.34
VPS16-206ENST00000466415 TMEM176AQ96HP8 235 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 CASD1Q96PB1 797 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 MRPL45Q9BRJ2 306 aaKnown RBP12.94□□□□□ -0.34
VPS16-206ENST00000466415 NT5C1AQ9BXI3 368 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 TSGA10Q9BZW7 698 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 ACP6Q9NPH0 428 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 KCND1Q9NSA2 647 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 CEP83Q9Y592 693 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 PCDHA13Q9Y5I0 950 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 TRIP11Q15643 1979 aa12.94□□□□□ -0.34
VPS16-206ENST00000466415 TDRD15B5MCY1 1934 aaKnown RBP12.94□□□□□ -0.34
VPS16-206ENST00000466415 USP27XA6NNY8 438 aa12.93□□□□□ -0.34
VPS16-206ENST00000466415 A8MXQ7 604 aa12.93□□□□□ -0.34
VPS16-206ENST00000466415 TMCO5BA8MYB1 307 aa12.93□□□□□ -0.34
VPS16-206ENST00000466415 DDX3XO00571 662 aaKnown RBP eCLIP12.93□□□□□ -0.34
VPS16-206ENST00000466415 TACC1O75410 805 aa12.93□□□□□ -0.34
VPS16-206ENST00000466415 MMEP08473 750 aa12.93□□□□□ -0.34
VPS16-206ENST00000466415 BRD2P25440 801 aaKnown RBP12.93□□□□□ -0.34
VPS16-206ENST00000466415 WDR5P61964 334 aaKnown RBP12.93□□□□□ -0.34
VPS16-206ENST00000466415 DSC1Q08554 894 aa12.93□□□□□ -0.34
VPS16-206ENST00000466415 KIF5AQ12840 1032 aa12.93□□□□□ -0.34
VPS16-206ENST00000466415 ORC1Q13415 861 aa12.93□□□□□ -0.34
VPS16-206ENST00000466415 ALKBH5Q6P6C2 394 aaKnown RBP12.93□□□□□ -0.34
VPS16-206ENST00000466415 PSRC1Q6PGN9 363 aaPredicted RBP12.93□□□□□ -0.34
VPS16-206ENST00000466415 TRIM72Q6ZMU5 477 aa12.93□□□□□ -0.34
VPS16-206ENST00000466415 DPH6Q7L8W6 267 aa12.93□□□□□ -0.34
VPS16-206ENST00000466415 UNC93AQ86WB7 457 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms