RNA–Protein interactions for RNA: ENST00000466392.1

EDEM3-204, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 5

Gene EDEM3, Length 491 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-204ENST00000466392 GET4Q7L5D6 327 aaPredicted RBP12.73□□□□□ -0.37
EDEM3-204ENST00000466392 C12orf56Q8IXR9 622 aa12.73□□□□□ -0.37
EDEM3-204ENST00000466392 TTC9BQ8N6N2 239 aa12.73□□□□□ -0.37
EDEM3-204ENST00000466392 TDRD5Q8NAT2 981 aaKnown RBP12.73□□□□□ -0.37
EDEM3-204ENST00000466392 CACTINQ8WUQ7 758 aaKnown RBP12.73□□□□□ -0.37
EDEM3-204ENST00000466392 ZNF516Q92618 1163 aa12.73□□□□□ -0.37
EDEM3-204ENST00000466392 CCDC47Q96A33 483 aaKnown RBP12.73□□□□□ -0.37
EDEM3-204ENST00000466392 ELMO3Q96BJ8 720 aa12.73□□□□□ -0.37
EDEM3-204ENST00000466392 ANKRD36BP1Q96IX9 119 aa12.73□□□□□ -0.37
EDEM3-204ENST00000466392 CGRRF1Q99675 332 aa12.73□□□□□ -0.37
EDEM3-204ENST00000466392 RTP3Q9BQQ7 232 aa12.73□□□□□ -0.37
EDEM3-204ENST00000466392 CRISPLD1Q9H336 500 aa12.73□□□□□ -0.37
EDEM3-204ENST00000466392 KIAA1586Q9HCI6 787 aa12.73□□□□□ -0.37
EDEM3-204ENST00000466392 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.73□□□□□ -0.37
EDEM3-204ENST00000466392 PI4K2BG5E9Z4 385 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 PDXKO00764 312 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 PRRG1O14668 218 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 DCXO43602 365 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 SOAT2O75908 522 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 CST3P01034 146 aaPredicted RBP12.72□□□□□ -0.37
EDEM3-204ENST00000466392 TNNC2P02585 160 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 ATF2P15336 505 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 TNNI1P19237 187 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 TYMPP19971 482 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 GBP2P32456 591 aaPredicted RBP12.72□□□□□ -0.37
EDEM3-204ENST00000466392 SNRPFP62306 86 aaKnown RBP12.72□□□□□ -0.37
EDEM3-204ENST00000466392 DLG4P78352 724 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 KCNB1Q14721 858 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 CCDC142Q17RM4 750 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 CEP135Q66GS9 1140 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 WDR49Q8IV35 697 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 EEF2KMTQ96G04 330 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 ZNF560Q96MR9 790 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 FNBP1Q96RU3 617 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 MYADMQ96S97 322 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 WDR6Q9NNW5 1121 aaKnown RBP12.72□□□□□ -0.37
EDEM3-204ENST00000466392 C11orf16Q9NQ32 467 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 DMAC2Q9NW81 257 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 DNMT3BQ9UBC3 853 aaKnown RBP12.72□□□□□ -0.37
EDEM3-204ENST00000466392 LIMD1Q9UGP4 676 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 ITGA11Q9UKX5 1188 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 L1RE1Q9UN81 338 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 NR2E1Q9Y466 385 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 PCDHA5Q9Y5H7 936 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 INSL5Q9Y5Q6 135 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 SNX9Q9Y5X1 595 aa12.72□□□□□ -0.37
EDEM3-204ENST00000466392 LRRIQ3A6PVS8 624 aaPredicted RBP12.71□□□□□ -0.37
EDEM3-204ENST00000466392 NRG2O14511 850 aaPredicted RBP12.71□□□□□ -0.37
EDEM3-204ENST00000466392 C1RP00736 705 aa12.71□□□□□ -0.37
EDEM3-204ENST00000466392 CYP11A1P05108 521 aa12.71□□□□□ -0.37
EDEM3-204ENST00000466392 ACAT1P24752 427 aaKnown RBP12.71□□□□□ -0.37
EDEM3-204ENST00000466392 ELF1P32519 619 aa12.71□□□□□ -0.37
EDEM3-204ENST00000466392 RBP5P82980 135 aa12.71□□□□□ -0.37
EDEM3-204ENST00000466392 SURF1Q15526 300 aa12.71□□□□□ -0.37
EDEM3-204ENST00000466392 DUOXA2Q1HG44 320 aa12.71□□□□□ -0.37
EDEM3-204ENST00000466392 TRAPPC11Q7Z392 1133 aa12.71□□□□□ -0.37
EDEM3-204ENST00000466392 PDCL2Q8N4E4 241 aa12.71□□□□□ -0.37
EDEM3-204ENST00000466392 ATAD1Q8NBU5 361 aa12.71□□□□□ -0.37
EDEM3-204ENST00000466392 RSAD2Q8WXG1 361 aa12.71□□□□□ -0.37
EDEM3-204ENST00000466392 ING5Q8WYH8 240 aa12.71□□□□□ -0.37
EDEM3-204ENST00000466392 MFSD14AQ96MC6 490 aa12.71□□□□□ -0.37
EDEM3-204ENST00000466392 CGNQ9P2M7 1197 aaKnown RBP12.71□□□□□ -0.37
EDEM3-204ENST00000466392 AFF4Q9UHB7 1163 aaKnown RBP12.71□□□□□ -0.37
EDEM3-204ENST00000466392 SLC27A5Q9Y2P5 690 aa12.71□□□□□ -0.37
EDEM3-204ENST00000466392 MTMR11A4FU01 709 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 CALUO43852 315 aaPredicted RBP12.7□□□□□ -0.38
EDEM3-204ENST00000466392 KINO60870 393 aaKnown RBP12.7□□□□□ -0.38
EDEM3-204ENST00000466392 PAPLNO95428 1278 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 LRG1P02750 347 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 HNRNPA1P09651 372 aaKnown RBP eCLIP12.7□□□□□ -0.38
EDEM3-204ENST00000466392 NR2F2P24468 414 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 HOXA9P31269 272 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 PNPLA4P41247 253 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 PRCPP42785 496 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 TWF1Q12792 350 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 DUSP4Q13115 394 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 SLC5A9Q2M3M2 681 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 SLC39A12Q504Y0 691 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 TPGS2Q68CL5 300 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 POTEHQ6S545 545 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 LRRTM3Q86VH5 581 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 OSTM1Q86WC4 334 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 METTL23Q86XA0 190 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 SLC9A9Q8IVB4 645 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 TCEAL8Q8IYN2 117 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 HS6ST3Q8IZP7 471 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 GUF1Q8N442 669 aaKnown RBP12.7□□□□□ -0.38
EDEM3-204ENST00000466392 LRRC52Q8N7C0 313 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 ITFG1Q8TB96 612 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 GOLGA5Q8TBA6 731 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 PARD3BQ8TEW8 1205 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 SMARCE1Q969G3 411 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 HPDLQ96IR7 371 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 TIGD1Q96MW7 591 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 TMLHEQ9NVH6 421 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 CEP72Q9P209 647 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 TRAF3IP3Q9Y228 551 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 YIPF1Q9Y548 306 aa12.7□□□□□ -0.38
EDEM3-204ENST00000466392 ARHGEF37A1IGU5 675 aa12.69□□□□□ -0.38
EDEM3-204ENST00000466392 TRIM49BA6NDI0 452 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms