RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 NEUROG2Q9H2A3 272 aa14.42□□□□□ -0.1
UBE4B-206ENST00000466379 SLITRK6Q9H5Y7 841 aa14.42□□□□□ -0.1
UBE4B-206ENST00000466379 VIPAS39Q9H9C1 493 aa14.42□□□□□ -0.1
UBE4B-206ENST00000466379 NRCAMQ92823 1304 aa14.42□□□□□ -0.1
UBE4B-206ENST00000466379 MYO1FO00160 1098 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 TNPO2O14787 897 aaKnown RBP14.41□□□□□ -0.1
UBE4B-206ENST00000466379 TREHO43280 583 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 HOXA11P31270 313 aaPredicted RBP14.41□□□□□ -0.1
UBE4B-206ENST00000466379 RGS2P41220 211 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 PSEN2P49810 448 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 RWDD2BP57060 319 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 LACTBP83111 547 aaPredicted RBP14.41□□□□□ -0.1
UBE4B-206ENST00000466379 POU5F1Q01860 360 aaKnown RBP14.41□□□□□ -0.1
UBE4B-206ENST00000466379 HLTFQ14527 1009 aaKnown RBP eCLIP14.41□□□□□ -0.1
UBE4B-206ENST00000466379 DENND1BQ6P3S1 775 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 EMBQ6PCB8 327 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 WDTC1Q8N5D0 677 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 C18orf8Q96DM3 657 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 NAP1L3Q99457 506 aaPredicted RBP14.41□□□□□ -0.1
UBE4B-206ENST00000466379 TRIM31Q9BZY9 425 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 DPH5Q9H2P9 285 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 ASB7Q9H672 318 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 SNTG2Q9NY99 539 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 GJD2Q9UKL4 321 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 AGAP1Q9UPQ3 857 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 USTQ9Y2C2 406 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 HES2Q9Y543 173 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 TRIP12Q14669 1992 aaPredicted RBP14.41□□□□□ -0.1
UBE4B-206ENST00000466379 GOLGA6L10A0A0M3HER8 536 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 MMP8P22894 467 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 ECHS1P30084 290 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 GGCXP38435 758 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 PRELID2Q8N945 189 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 CCDC26Q8TAB7 109 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 CAVIN3Q969G5 261 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 KIF12Q96FN5 646 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 BCO2Q9BYV7 579 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 GCOM2Q9BZD3 368 aaPredicted RBP14.41□□□□□ -0.1
UBE4B-206ENST00000466379 ACBD3Q9H3P7 528 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 FAN1Q9Y2M0 1017 aa14.41□□□□□ -0.1
UBE4B-206ENST00000466379 CITO14578 2027 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 AGPSO00116 658 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 TLR3O15455 904 aaKnown RBP14.4□□□□□ -0.1
UBE4B-206ENST00000466379 DAPK3O43293 454 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 SYF2O95926 243 aaKnown RBP14.4□□□□□ -0.1
UBE4B-206ENST00000466379 GJC1P36383 396 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 RAD23BP54727 409 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 TAS2R40P59535 323 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 RPL7AP62424 266 aaKnown RBP14.4□□□□□ -0.1
UBE4B-206ENST00000466379 GABPB1Q06547 395 aaPredicted RBP14.4□□□□□ -0.1
UBE4B-206ENST00000466379 C1QBPQ07021 282 aaKnown RBP14.4□□□□□ -0.1
UBE4B-206ENST00000466379 CYP4A22Q5TCH4 519 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 PLEKHA7Q6IQ23 1121 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 SLC13A5Q86YT5 568 aaPredicted RBP14.4□□□□□ -0.1
UBE4B-206ENST00000466379 TMEM40Q8WWA1 233 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 HPDLQ96IR7 371 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 APBA2Q99767 749 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 ZFYVE28Q9HCC9 887 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 DPP3Q9NY33 737 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 VPS18Q9P253 973 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 TJP2Q9UDY2 1190 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 TRIP11Q15643 1979 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 MYADML2A6NDP7 307 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 FAM155AB1AL88 458 aaPredicted RBP14.4□□□□□ -0.1
UBE4B-206ENST00000466379 PROSCO94903 275 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 GRM5P41594 1212 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 DR1Q01658 176 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 TERF2Q15554 542 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 TTC27Q6P3X3 843 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 MAATS1Q7Z4T9 603 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 WHAMMQ8TF30 809 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 VCPIP1Q96JH7 1222 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 APOL6Q9BWW8 343 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 ARHGAP39Q9C0H5 1083 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 ELOVL4Q9GZR5 314 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 AP5M1Q9H0R1 490 aa14.4□□□□□ -0.1
UBE4B-206ENST00000466379 SMIM35A0A1B0GVV1 85 aa14.39□□□□□ -0.11
UBE4B-206ENST00000466379 MBLAC1A4D2B0 266 aaPredicted RBP14.39□□□□□ -0.11
UBE4B-206ENST00000466379 BHMG1C9JSJ3 638 aaPredicted RBP14.39□□□□□ -0.11
UBE4B-206ENST00000466379 SSR1P43307 286 aaKnown RBP14.39□□□□□ -0.11
UBE4B-206ENST00000466379 AARSP49588 968 aaKnown RBP eCLIP14.39□□□□□ -0.11
UBE4B-206ENST00000466379 CPT1AP50416 773 aa14.39□□□□□ -0.11
UBE4B-206ENST00000466379 YWHAEP62258 255 aaKnown RBP14.39□□□□□ -0.11
UBE4B-206ENST00000466379 HSP90B2PQ58FF3 399 aa14.39□□□□□ -0.11
UBE4B-206ENST00000466379 GLRA4Q5JXX5 417 aa14.39□□□□□ -0.11
UBE4B-206ENST00000466379 TMEM35BQ8NCS4 154 aa14.39□□□□□ -0.11
UBE4B-206ENST00000466379 TRPV1Q8NER1 839 aa14.39□□□□□ -0.11
UBE4B-206ENST00000466379 MAGOHBQ96A72 148 aaKnown RBP14.39□□□□□ -0.11
UBE4B-206ENST00000466379 HERPUD2Q9BSE4 406 aa14.39□□□□□ -0.11
UBE4B-206ENST00000466379 MRPL47Q9HD33 250 aaKnown RBP14.39□□□□□ -0.11
UBE4B-206ENST00000466379 CYTH4Q9UIA0 394 aa14.39□□□□□ -0.11
UBE4B-206ENST00000466379 GOLGA6BA6NDN3 693 aa14.39□□□□□ -0.11
UBE4B-206ENST00000466379 HAS3O00219 553 aa14.39□□□□□ -0.11
UBE4B-206ENST00000466379 PPEF2O14830 753 aa14.39□□□□□ -0.11
UBE4B-206ENST00000466379 PHF2O75151 1096 aa14.39□□□□□ -0.11
UBE4B-206ENST00000466379 RARAP10276 462 aa14.39□□□□□ -0.11
UBE4B-206ENST00000466379 DARSP14868 501 aaKnown RBP14.39□□□□□ -0.11
UBE4B-206ENST00000466379 SIX1Q15475 284 aaPredicted RBP14.39□□□□□ -0.11
UBE4B-206ENST00000466379 KYAT1Q16773 422 aa14.39□□□□□ -0.11
UBE4B-206ENST00000466379 DPH6Q7L8W6 267 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms