RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 TCAF2A6NFQ2 919 aa6.73□□□□□ -1.33
NCL-208ENST00000466274 GSG1L2A8MUP6 293 aa6.73□□□□□ -1.33
NCL-208ENST00000466274 SORBS3O60504 671 aa6.73□□□□□ -1.33
NCL-208ENST00000466274 KCNK5O95279 499 aa6.73□□□□□ -1.33
NCL-208ENST00000466274 UBA1P22314 1058 aaKnown RBP6.73□□□□□ -1.33
NCL-208ENST00000466274 GATMP50440 423 aa6.73□□□□□ -1.33
NCL-208ENST00000466274 PFKPQ01813 784 aa6.73□□□□□ -1.33
NCL-208ENST00000466274 PSMD2Q13200 908 aa6.73□□□□□ -1.33
NCL-208ENST00000466274 LPAL2Q16609 132 aa6.73□□□□□ -1.33
NCL-208ENST00000466274 USH1GQ495M9 461 aa6.73□□□□□ -1.33
NCL-208ENST00000466274 PDZD8Q8NEN9 1154 aa6.73□□□□□ -1.33
NCL-208ENST00000466274 DNAJB3Q8WWF6 145 aa6.73□□□□□ -1.33
NCL-208ENST00000466274 RSAD2Q8WXG1 361 aa6.73□□□□□ -1.33
NCL-208ENST00000466274 TMEM117Q9H0C3 514 aa6.73□□□□□ -1.33
NCL-208ENST00000466274 PUS7LQ9H0K6 701 aaKnown RBP6.73□□□□□ -1.33
NCL-208ENST00000466274 BCAS3Q9H6U6 928 aa6.73□□□□□ -1.33
NCL-208ENST00000466274 CWH43Q9H720 699 aa6.73□□□□□ -1.33
NCL-208ENST00000466274 MRS2Q9HD23 443 aa6.73□□□□□ -1.33
NCL-208ENST00000466274 PRMT8Q9NR22 394 aaPredicted RBP6.73□□□□□ -1.33
NCL-208ENST00000466274 RXFP3Q9NSD7 469 aa6.73□□□□□ -1.33
NCL-208ENST00000466274 TUBE1Q9UJT0 475 aa6.73□□□□□ -1.33
NCL-208ENST00000466274 MRPS17Q9Y2R5 130 aaKnown RBP6.73□□□□□ -1.33
NCL-208ENST00000466274 MRPL11Q9Y3B7 192 aaKnown RBP6.73□□□□□ -1.33
NCL-208ENST00000466274 TRPV2Q9Y5S1 764 aa6.73□□□□□ -1.33
NCL-208ENST00000466274 FRMPD2Q68DX3 1309 aaPredicted RBP6.73□□□□□ -1.33
NCL-208ENST00000466274 NAV1Q8NEY1 1877 aa6.73□□□□□ -1.33
NCL-208ENST00000466274 MAST4O15021 2626 aa6.72□□□□□ -1.33
NCL-208ENST00000466274 TRIP12Q14669 1992 aaPredicted RBP6.72□□□□□ -1.33
NCL-208ENST00000466274 FAM221AA4D161 298 aa6.72□□□□□ -1.33
NCL-208ENST00000466274 CHURC1-FNTBB4DL54 471 aa6.72□□□□□ -1.33
NCL-208ENST00000466274 CILPO75339 1184 aa6.72□□□□□ -1.33
NCL-208ENST00000466274 MYCLP12524 364 aaPredicted RBP6.72□□□□□ -1.33
NCL-208ENST00000466274 EPCAMP16422 314 aa6.72□□□□□ -1.33
NCL-208ENST00000466274 GLDCP23378 1020 aa6.72□□□□□ -1.33
NCL-208ENST00000466274 CNR2P34972 360 aa6.72□□□□□ -1.33
NCL-208ENST00000466274 RPS9P46781 194 aaKnown RBP6.72□□□□□ -1.33
NCL-208ENST00000466274 ALDH7A1P49419 539 aaKnown RBP6.72□□□□□ -1.33
NCL-208ENST00000466274 POLGP54098 1239 aaPredicted RBP6.72□□□□□ -1.33
NCL-208ENST00000466274 YARSP54577 528 aaKnown RBP6.72□□□□□ -1.33
NCL-208ENST00000466274 DAB2P98082 770 aa6.72□□□□□ -1.33
NCL-208ENST00000466274 PPFIA1Q13136 1202 aa6.72□□□□□ -1.33
NCL-208ENST00000466274 CAMK2GQ13555 558 aaPredicted RBP6.72□□□□□ -1.33
NCL-208ENST00000466274 SIM2Q14190 667 aaPredicted RBP6.72□□□□□ -1.33
NCL-208ENST00000466274 GNPTABQ3T906 1256 aa6.72□□□□□ -1.33
NCL-208ENST00000466274 TMEM201Q5SNT2 666 aa6.72□□□□□ -1.33
NCL-208ENST00000466274 FAM102BQ5T8I3 360 aa6.72□□□□□ -1.33
NCL-208ENST00000466274 METTL7BQ6UX53 244 aa6.72□□□□□ -1.33
NCL-208ENST00000466274 LRRC43Q8N309 656 aa6.72□□□□□ -1.33
NCL-208ENST00000466274 NME8Q8N427 588 aa6.72□□□□□ -1.33
NCL-208ENST00000466274 CMASQ8NFW8 434 aaPredicted RBP6.72□□□□□ -1.33
NCL-208ENST00000466274 BAHD1Q8TBE0 780 aaPredicted RBP6.72□□□□□ -1.33
NCL-208ENST00000466274 TMEM169Q96HH4 297 aa6.72□□□□□ -1.33
NCL-208ENST00000466274 IER2Q9BTL4 223 aa6.72□□□□□ -1.33
NCL-208ENST00000466274 LSM14BQ9BX40 385 aaKnown RBP6.72□□□□□ -1.33
NCL-208ENST00000466274 ELAC1Q9H777 363 aaKnown RBP6.72□□□□□ -1.33
NCL-208ENST00000466274 WDR6Q9NNW5 1121 aaKnown RBP6.72□□□□□ -1.33
NCL-208ENST00000466274 PXMP2Q9NR77 195 aa6.72□□□□□ -1.33
NCL-208ENST00000466274 RGS18Q9NS28 235 aa6.72□□□□□ -1.33
NCL-208ENST00000466274 TMEM161AQ9NX61 479 aa6.72□□□□□ -1.33
NCL-208ENST00000466274 IRAK3Q9Y616 596 aa6.72□□□□□ -1.33
NCL-208ENST00000466274 MBLAC1A4D2B0 266 aaPredicted RBP6.71□□□□□ -1.34
NCL-208ENST00000466274 RRN3P2A6NIE6 340 aa6.71□□□□□ -1.34
NCL-208ENST00000466274 PATL2C9JE40 543 aaKnown RBP6.71□□□□□ -1.34
NCL-208ENST00000466274 BPNT1O95861 308 aa6.71□□□□□ -1.34
NCL-208ENST00000466274 F13A1P00488 732 aa6.71□□□□□ -1.34
NCL-208ENST00000466274 PF4P02776 101 aa6.71□□□□□ -1.34
NCL-208ENST00000466274 TOP1P11387 765 aaKnown RBP6.71□□□□□ -1.34
NCL-208ENST00000466274 CCND2P30279 289 aa6.71□□□□□ -1.34
NCL-208ENST00000466274 ST13P50502 369 aaKnown RBP6.71□□□□□ -1.34
NCL-208ENST00000466274 SNW1Q13573 536 aaKnown RBP6.71□□□□□ -1.34
NCL-208ENST00000466274 MLF2Q15773 248 aaPredicted RBP6.71□□□□□ -1.34
NCL-208ENST00000466274 SLC44A4Q53GD3 710 aa6.71□□□□□ -1.34
NCL-208ENST00000466274 UTP14CQ5TAP6 766 aaKnown RBP6.71□□□□□ -1.34
NCL-208ENST00000466274 STPG1Q5TH74 334 aa6.71□□□□□ -1.34
NCL-208ENST00000466274 TTLL10Q6ZVT0 673 aa6.71□□□□□ -1.34
NCL-208ENST00000466274 VPS52Q8N1B4 723 aa6.71□□□□□ -1.34
NCL-208ENST00000466274 SAMD3Q8N6K7 520 aa6.71□□□□□ -1.34
NCL-208ENST00000466274 SLC22A17Q8WUG5 538 aa6.71□□□□□ -1.34
NCL-208ENST00000466274 RNF141Q8WVD5 230 aa6.71□□□□□ -1.34
NCL-208ENST00000466274 MAP4K1Q92918 833 aa6.71□□□□□ -1.34
NCL-208ENST00000466274 PHKBQ93100 1093 aa6.71□□□□□ -1.34
NCL-208ENST00000466274 ADAM2Q99965 735 aa6.71□□□□□ -1.34
NCL-208ENST00000466274 PDCD2LQ9BRP1 358 aa6.71□□□□□ -1.34
NCL-208ENST00000466274 DDX23Q9BUQ8 820 aaKnown RBP6.71□□□□□ -1.34
NCL-208ENST00000466274 TRAIPQ9BWF2 469 aa6.71□□□□□ -1.34
NCL-208ENST00000466274 RHOBTB2Q9BYZ6 727 aa6.71□□□□□ -1.34
NCL-208ENST00000466274 CELF4Q9BZC1 486 aaKnown RBP6.71□□□□□ -1.34
NCL-208ENST00000466274 BOLA2Q9H3K6 86 aa6.71□□□□□ -1.34
NCL-208ENST00000466274 LTB4R2Q9NPC1 389 aa6.71□□□□□ -1.34
NCL-208ENST00000466274 MAP3K20Q9NYL2 800 aaKnown RBP6.71□□□□□ -1.34
NCL-208ENST00000466274 ERAP1Q9NZ08 941 aa6.71□□□□□ -1.34
NCL-208ENST00000466274 EBF1Q9UH73 591 aa6.71□□□□□ -1.34
NCL-208ENST00000466274 ZFP37Q9Y6Q3 630 aaPredicted RBP6.71□□□□□ -1.34
NCL-208ENST00000466274 SPEGQ15772 3267 aa6.71□□□□□ -1.34
NCL-208ENST00000466274 IGSF9BQ9UPX0 1349 aa6.71□□□□□ -1.34
NCL-208ENST00000466274 UNC79Q9P2D8 2635 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 SHISA3A0PJX4 238 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 ANHXE9PGG2 379 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 NUAK1O60285 661 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 RANBP6O60518 1105 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms