RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 TUFMP49411 452 aaKnown RBP14.69□□□□□ -0.06
CHD3-207ENST00000466233 FCHO2Q0JRZ9 810 aa14.69□□□□□ -0.06
CHD3-207ENST00000466233 SEZ6Q53EL9 994 aa14.69□□□□□ -0.06
CHD3-207ENST00000466233 ARMCX5Q6P1M9 558 aa14.69□□□□□ -0.06
CHD3-207ENST00000466233 DSTYKQ6XUX3 929 aa14.69□□□□□ -0.06
CHD3-207ENST00000466233 ITIH5Q86UX2 942 aa14.69□□□□□ -0.06
CHD3-207ENST00000466233 ATRIPQ8WXE1 791 aa14.69□□□□□ -0.06
CHD3-207ENST00000466233 LARP4BQ92615 738 aaKnown RBP14.69□□□□□ -0.06
CHD3-207ENST00000466233 PSMG2Q969U7 264 aa14.69□□□□□ -0.06
CHD3-207ENST00000466233 TCEAL4Q96EI5 215 aa14.69□□□□□ -0.06
CHD3-207ENST00000466233 PLIN2Q99541 437 aa14.69□□□□□ -0.06
CHD3-207ENST00000466233 MSTO1Q9BUK6 570 aa14.69□□□□□ -0.06
CHD3-207ENST00000466233 CHRDQ9H2X0 955 aa14.69□□□□□ -0.06
CHD3-207ENST00000466233 HEBP1Q9NRV9 189 aa14.69□□□□□ -0.06
CHD3-207ENST00000466233 STK17AQ9UEE5 414 aa14.69□□□□□ -0.06
CHD3-207ENST00000466233 YIPF1Q9Y548 306 aa14.69□□□□□ -0.06
CHD3-207ENST00000466233 R4GN57 208 aa14.69□□□□□ -0.06
CHD3-207ENST00000466233 FANCMQ8IYD8 2048 aa14.69□□□□□ -0.06
CHD3-207ENST00000466233 CACNA1IQ9P0X4 2223 aa14.68□□□□□ -0.06
CHD3-207ENST00000466233 NPHP3-ACAD11A0A0J9YXS1 232 aa14.68□□□□□ -0.06
CHD3-207ENST00000466233 ARNTLO00327 626 aa14.68□□□□□ -0.06
CHD3-207ENST00000466233 CHADO15335 359 aa14.68□□□□□ -0.06
CHD3-207ENST00000466233 PLCG1P19174 1290 aa14.68□□□□□ -0.06
CHD3-207ENST00000466233 C9orf57Q5W0N0 161 aa14.68□□□□□ -0.06
CHD3-207ENST00000466233 VITQ6UXI7 678 aa14.68□□□□□ -0.06
CHD3-207ENST00000466233 ZNF720Q7Z2F6 126 aa14.68□□□□□ -0.06
CHD3-207ENST00000466233 TMC8Q8IU68 726 aa14.68□□□□□ -0.06
CHD3-207ENST00000466233 KRI1Q8N9T8 703 aaKnown RBP14.68□□□□□ -0.06
CHD3-207ENST00000466233 ZSCAN18Q8TBC5 510 aaPredicted RBP14.68□□□□□ -0.06
CHD3-207ENST00000466233 EPC1Q9H2F5 836 aa14.68□□□□□ -0.06
CHD3-207ENST00000466233 C8orf33Q9H7E9 229 aaPredicted RBP14.68□□□□□ -0.06
CHD3-207ENST00000466233 OTOGLQ3ZCN5 2332 aa14.67□□□□□ -0.06
CHD3-207ENST00000466233 PDCD11Q14690 1871 aaKnown RBP14.67□□□□□ -0.06
CHD3-207ENST00000466233 ZNF263O14978 683 aa14.67□□□□□ -0.06
CHD3-207ENST00000466233 LRRN2O75325 713 aa14.67□□□□□ -0.06
CHD3-207ENST00000466233 CD2BP2O95400 341 aaKnown RBP14.67□□□□□ -0.06
CHD3-207ENST00000466233 VNN2O95498 520 aa14.67□□□□□ -0.06
CHD3-207ENST00000466233 KRT18P05783 430 aaKnown RBP14.67□□□□□ -0.06
CHD3-207ENST00000466233 DUSP4Q13115 394 aa14.67□□□□□ -0.06
CHD3-207ENST00000466233 CUL4AQ13619 759 aa14.67□□□□□ -0.06
CHD3-207ENST00000466233 MCM6Q14566 821 aa14.67□□□□□ -0.06
CHD3-207ENST00000466233 TMEM132DQ14C87 1099 aa14.67□□□□□ -0.06
CHD3-207ENST00000466233 SF3A1Q15459 793 aaKnown RBP14.67□□□□□ -0.06
CHD3-207ENST00000466233 SLC39A4Q6P5W5 647 aa14.67□□□□□ -0.06
CHD3-207ENST00000466233 HS6ST3Q8IZP7 471 aa14.67□□□□□ -0.06
CHD3-207ENST00000466233 ST13P5Q8NFI4 369 aaPredicted RBP14.67□□□□□ -0.06
CHD3-207ENST00000466233 SHKBP1Q8TBC3 707 aa14.67□□□□□ -0.06
CHD3-207ENST00000466233 FAM3CQ92520 227 aa14.67□□□□□ -0.06
CHD3-207ENST00000466233 SECISBP2LQ93073 1101 aaKnown RBP14.67□□□□□ -0.06
CHD3-207ENST00000466233 SENP8Q96LD8 212 aa14.67□□□□□ -0.06
CHD3-207ENST00000466233 ZSWIM3Q96MP5 696 aa14.67□□□□□ -0.06
CHD3-207ENST00000466233 STRA6Q9BX79 667 aa14.67□□□□□ -0.06
CHD3-207ENST00000466233 DNAJC25Q9H1X3 360 aa14.67□□□□□ -0.06
CHD3-207ENST00000466233 CCDC39Q9UFE4 941 aa14.67□□□□□ -0.06
CHD3-207ENST00000466233 MTMR11A4FU01 709 aa14.66□□□□□ -0.06
CHD3-207ENST00000466233 PPP1R37O75864 691 aa14.66□□□□□ -0.06
CHD3-207ENST00000466233 IL18RAPO95256 599 aa14.66□□□□□ -0.06
CHD3-207ENST00000466233 PAPSS2O95340 614 aaPredicted RBP14.66□□□□□ -0.06
CHD3-207ENST00000466233 MYL4P12829 197 aa14.66□□□□□ -0.06
CHD3-207ENST00000466233 CD72P21854 359 aa14.66□□□□□ -0.06
CHD3-207ENST00000466233 GDI1P31150 447 aa14.66□□□□□ -0.06
CHD3-207ENST00000466233 PNPLA4P41247 253 aa14.66□□□□□ -0.06
CHD3-207ENST00000466233 CCR3P51677 355 aa14.66□□□□□ -0.06
CHD3-207ENST00000466233 PLCB2Q00722 1185 aa14.66□□□□□ -0.06
CHD3-207ENST00000466233 CACNB1Q02641 598 aaPredicted RBP14.66□□□□□ -0.06
CHD3-207ENST00000466233 CSTF1Q05048 431 aaKnown RBP14.66□□□□□ -0.06
CHD3-207ENST00000466233 ALCAMQ13740 583 aa14.66□□□□□ -0.06
CHD3-207ENST00000466233 PUM1Q14671 1186 aaKnown RBP eCLIP14.66□□□□□ -0.06
CHD3-207ENST00000466233 KARSQ15046 597 aaKnown RBP14.66□□□□□ -0.06
CHD3-207ENST00000466233 ADALQ6DHV7 355 aa14.66□□□□□ -0.06
CHD3-207ENST00000466233 JADE1Q6IE81 842 aa14.66□□□□□ -0.06
CHD3-207ENST00000466233 DNAJB7Q7Z6W7 309 aaPredicted RBP14.66□□□□□ -0.06
CHD3-207ENST00000466233 METTL23Q86XA0 190 aa14.66□□□□□ -0.06
CHD3-207ENST00000466233 THEM5Q8N1Q8 247 aa14.66□□□□□ -0.06
CHD3-207ENST00000466233 RASSF8Q8NHQ8 419 aa14.66□□□□□ -0.06
CHD3-207ENST00000466233 SPATA18Q8TC71 538 aa14.66□□□□□ -0.06
CHD3-207ENST00000466233 LRRC15Q8TF66 581 aa14.66□□□□□ -0.06
CHD3-207ENST00000466233 ZCWPW1Q9H0M4 648 aa14.66□□□□□ -0.06
CHD3-207ENST00000466233 DLL3Q9NYJ7 618 aa14.66□□□□□ -0.06
CHD3-207ENST00000466233 AGO2Q9UKV8 859 aaKnown RBP14.66□□□□□ -0.06
CHD3-207ENST00000466233 EXOC7Q9UPT5 735 aa14.66□□□□□ -0.06
CHD3-207ENST00000466233 SRPRBQ9Y5M8 271 aaKnown RBP14.66□□□□□ -0.06
CHD3-207ENST00000466233 PIAS3Q9Y6X2 628 aa14.66□□□□□ -0.06
CHD3-207ENST00000466233 CACNA1AO00555 2505 aa14.66□□□□□ -0.06
CHD3-207ENST00000466233 MIA3Q5JRA6 1907 aa14.66□□□□□ -0.06
CHD3-207ENST00000466233 MYH11P35749 1972 aa14.65□□□□□ -0.06
CHD3-207ENST00000466233 F5P12259 2224 aa14.65□□□□□ -0.06
CHD3-207ENST00000466233 HEPACAM2A8MVW5 462 aa14.65□□□□□ -0.06
CHD3-207ENST00000466233 TDGF1P13385 188 aa14.65□□□□□ -0.06
CHD3-207ENST00000466233 GAP43P17677 238 aa14.65□□□□□ -0.06
CHD3-207ENST00000466233 HOXA6P31267 233 aa14.65□□□□□ -0.06
CHD3-207ENST00000466233 TAF6P49848 677 aa14.65□□□□□ -0.06
CHD3-207ENST00000466233 SPAG1Q07617 926 aa14.65□□□□□ -0.06
CHD3-207ENST00000466233 VEPH1Q14D04 833 aa14.65□□□□□ -0.06
CHD3-207ENST00000466233 PTPAQ15257 358 aa14.65□□□□□ -0.06
CHD3-207ENST00000466233 TEAD2Q15562 447 aa14.65□□□□□ -0.06
CHD3-207ENST00000466233 ARHGAP29Q52LW3 1261 aa14.65□□□□□ -0.06
CHD3-207ENST00000466233 ARHGAP15Q53QZ3 475 aa14.65□□□□□ -0.06
CHD3-207ENST00000466233 RALGPS2Q86X27 583 aaPredicted RBP14.65□□□□□ -0.06
CHD3-207ENST00000466233 SYNPOQ8N3V7 929 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms