RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 GPR88Q9GZN0 384 aa11.95□□□□□ -0.5
VCP-204ENST00000466100 SMYD3Q9H7B4 428 aa11.95□□□□□ -0.5
VCP-204ENST00000466100 L1RE1Q9UN81 338 aa11.95□□□□□ -0.5
VCP-204ENST00000466100 DAAM1Q9Y4D1 1078 aa11.95□□□□□ -0.5
VCP-204ENST00000466100 SNX9Q9Y5X1 595 aa11.95□□□□□ -0.5
VCP-204ENST00000466100 EYSQ5T1H1 3165 aa11.95□□□□□ -0.5
VCP-204ENST00000466100 SF3B1O75533 1304 aaKnown RBP eCLIP11.94□□□□□ -0.5
VCP-204ENST00000466100 A0A1W2PPC1 479 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 C5orf67F2Z3F1 127 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 RNF225M0QZC1 329 aaPredicted RBP11.94□□□□□ -0.5
VCP-204ENST00000466100 TACC1O75410 805 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 TYMPP19971 482 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 TBXAS1P24557 533 aaPredicted RBP11.94□□□□□ -0.5
VCP-204ENST00000466100 PPM1AP35813 382 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 BMPR1AP36894 532 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 RAP1GAPP47736 663 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 TNNC1P63316 161 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 PLCB3Q01970 1234 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 TAP1Q03518 808 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 INCA1Q0VD86 236 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 RAB30Q15771 203 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 SPOUT1Q5T280 376 aaKnown RBP11.94□□□□□ -0.5
VCP-204ENST00000466100 SMYD5Q6GMV2 418 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 RRAGAQ7L523 313 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.94□□□□□ -0.5
VCP-204ENST00000466100 OSTM1Q86WC4 334 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 PPM1KQ8N3J5 372 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 PDCL2Q8N4E4 241 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 CCDC150Q8NCX0 1101 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 SHC3Q92529 594 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 C17orf80Q9BSJ5 609 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 FAM124BQ9H5Z6 455 aaPredicted RBP11.94□□□□□ -0.5
VCP-204ENST00000466100 CYP3A43Q9HB55 503 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 UBE2TQ9NPD8 197 aaPredicted RBP11.94□□□□□ -0.5
VCP-204ENST00000466100 AAASQ9NRG9 546 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 SPG21Q9NZD8 308 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 CEP72Q9P209 647 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 NXF1Q9UBU9 619 aaKnown RBP11.94□□□□□ -0.5
VCP-204ENST00000466100 DNAJC12Q9UKB3 198 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 PCDHB8Q9UN66 801 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 CNTN6Q9UQ52 1028 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 R3HCC1Q9Y3T6 440 aaKnown RBP11.94□□□□□ -0.5
VCP-204ENST00000466100 RWDD3Q9Y3V2 267 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 NME7Q9Y5B8 376 aa11.94□□□□□ -0.5
VCP-204ENST00000466100 A0A1W2PQJ5 194 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 CYB561D2O14569 222 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 GABRDO14764 452 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 SYN3O14994 580 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 TADA2AO75478 443 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 FGF18O76093 207 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 FAM163BP0C2L3 166 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 ODC1P11926 461 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 P4HA1P13674 534 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 TRIM21P19474 475 aaKnown RBP11.93□□□□□ -0.5
VCP-204ENST00000466100 FGFR3P22607 806 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 WARSP23381 471 aaKnown RBP11.93□□□□□ -0.5
VCP-204ENST00000466100 TKTP29401 623 aaKnown RBP11.93□□□□□ -0.5
VCP-204ENST00000466100 CTNNB1P35222 781 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 FXR1P51114 621 aaKnown RBP eCLIP11.93□□□□□ -0.5
VCP-204ENST00000466100 ZNF132P52740 706 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 CDH8P55286 799 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 POLR2FP61218 127 aaKnown RBP11.93□□□□□ -0.5
VCP-204ENST00000466100 ERVK-21P61565 698 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 SMAD3P84022 425 aaKnown RBP11.93□□□□□ -0.5
VCP-204ENST00000466100 ELAVL2Q12926 359 aaKnown RBP11.93□□□□□ -0.5
VCP-204ENST00000466100 WSCD1Q658N2 575 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 DSTYKQ6XUX3 929 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.93□□□□□ -0.5
VCP-204ENST00000466100 ENOSF1Q7L5Y1 443 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 DPH6Q7L8W6 267 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 TAS1R1Q7RTX1 841 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 TMC6Q7Z403 805 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 KLHL23Q8NBE8 558 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 SPATA18Q8TC71 538 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 JAKMIP2Q96AA8 810 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 TMEM169Q96HH4 297 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 FAM81BQ96LP2 452 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 PCMTD1Q96MG8 357 aaPredicted RBP11.93□□□□□ -0.5
VCP-204ENST00000466100 SAMD11Q96NU1 681 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 RTP3Q9BQQ7 232 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 MRPL45Q9BRJ2 306 aaKnown RBP11.93□□□□□ -0.5
VCP-204ENST00000466100 HERC2P3Q9BVR0 1158 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 PLVAPQ9BX97 442 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 EDEM3Q9BZQ6 932 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 NKX2-4Q9H2Z4 354 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 HMGXB4Q9UGU5 601 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 COLQQ9Y215 455 aaPredicted RBP11.93□□□□□ -0.5
VCP-204ENST00000466100 PCDHB12Q9Y5F1 795 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 PLXNA3P51805 1871 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 PATJQ8NI35 1801 aa11.93□□□□□ -0.5
VCP-204ENST00000466100 MYH10P35580 1976 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 F8VZ95 297 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 TRAPPC3O43617 180 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 HUS1O60921 280 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 CILPO75339 1184 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 SOD2P04179 222 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 WEE2P0C1S8 567 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 DNAJB2P25686 324 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 MFAP3P55082 362 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 TRIM14Q14142 442 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms