RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 GSDMAQ96QA5 445 aa13.91□□□□□ -0.18
COL5A1-206ENST00000465877 GZF1Q9H116 711 aaPredicted RBP13.91□□□□□ -0.18
COL5A1-206ENST00000465877 TSHZ2Q9NRE2 1034 aa13.91□□□□□ -0.18
COL5A1-206ENST00000465877 DMAC2Q9NW81 257 aa13.91□□□□□ -0.18
COL5A1-206ENST00000465877 AGAP1Q9UPQ3 857 aa13.91□□□□□ -0.18
COL5A1-206ENST00000465877 TRAF3IP3Q9Y228 551 aa13.91□□□□□ -0.18
COL5A1-206ENST00000465877 NR2E1Q9Y466 385 aa13.91□□□□□ -0.18
COL5A1-206ENST00000465877 NUP210Q8TEM1 1887 aaPredicted RBP13.91□□□□□ -0.18
COL5A1-206ENST00000465877 KPNA7A9QM74 516 aa13.9□□□□□ -0.18
COL5A1-206ENST00000465877 CYB561D2O14569 222 aa13.9□□□□□ -0.18
COL5A1-206ENST00000465877 ABLIM3O94929 683 aa13.9□□□□□ -0.18
COL5A1-206ENST00000465877 OAZ2O95190 189 aa13.9□□□□□ -0.18
COL5A1-206ENST00000465877 HNRNPA1P09651 372 aaKnown RBP eCLIP13.9□□□□□ -0.18
COL5A1-206ENST00000465877 TNNI1P19237 187 aa13.9□□□□□ -0.18
COL5A1-206ENST00000465877 NR2F2P24468 414 aa13.9□□□□□ -0.18
COL5A1-206ENST00000465877 HOXA9P31269 272 aa13.9□□□□□ -0.18
COL5A1-206ENST00000465877 CASP4P49662 377 aa13.9□□□□□ -0.18
COL5A1-206ENST00000465877 BFSP1Q12934 665 aa13.9□□□□□ -0.18
COL5A1-206ENST00000465877 NFIL3Q16649 462 aa13.9□□□□□ -0.18
COL5A1-206ENST00000465877 DUOXA2Q1HG44 320 aa13.9□□□□□ -0.18
COL5A1-206ENST00000465877 PPM1LQ5SGD2 360 aa13.9□□□□□ -0.18
COL5A1-206ENST00000465877 ZNF658Q5TYW1 1059 aaPredicted RBP13.9□□□□□ -0.18
COL5A1-206ENST00000465877 CYP26C1Q6V0L0 522 aa13.9□□□□□ -0.18
COL5A1-206ENST00000465877 CSGALNACT2Q8N6G5 542 aa13.9□□□□□ -0.18
COL5A1-206ENST00000465877 ZNF461Q8TAF7 563 aa13.9□□□□□ -0.18
COL5A1-206ENST00000465877 PLEKHO2Q8TD55 490 aa13.9□□□□□ -0.18
COL5A1-206ENST00000465877 KHSRPQ92945 711 aaKnown RBP eCLIP13.9□□□□□ -0.18
COL5A1-206ENST00000465877 MFSD14AQ96MC6 490 aa13.9□□□□□ -0.18
COL5A1-206ENST00000465877 OXCT2Q9BYC2 517 aaPredicted RBP13.9□□□□□ -0.18
COL5A1-206ENST00000465877 PRKD2Q9BZL6 878 aa13.9□□□□□ -0.18
COL5A1-206ENST00000465877 DSEQ9UL01 958 aa13.9□□□□□ -0.18
COL5A1-206ENST00000465877 PCDHA5Q9Y5H7 936 aa13.9□□□□□ -0.18
COL5A1-206ENST00000465877 DENND4CQ5VZ89 1909 aa13.9□□□□□ -0.18
COL5A1-206ENST00000465877 OR6C75A6NL08 312 aa13.89□□□□□ -0.19
COL5A1-206ENST00000465877 LRRIQ3A6PVS8 624 aaPredicted RBP13.89□□□□□ -0.19
COL5A1-206ENST00000465877 C2CD4DB7Z1M9 353 aa13.89□□□□□ -0.19
COL5A1-206ENST00000465877 CCL16O15467 120 aa13.89□□□□□ -0.19
COL5A1-206ENST00000465877 POU2F2P09086 479 aa13.89□□□□□ -0.19
COL5A1-206ENST00000465877 OR4Q2P0C623 313 aa13.89□□□□□ -0.19
COL5A1-206ENST00000465877 ATF2P15336 505 aa13.89□□□□□ -0.19
COL5A1-206ENST00000465877 RBP5P82980 135 aa13.89□□□□□ -0.19
COL5A1-206ENST00000465877 MYBPC2Q14324 1141 aa13.89□□□□□ -0.19
COL5A1-206ENST00000465877 COBLL1Q53SF7 1204 aa13.89□□□□□ -0.19
COL5A1-206ENST00000465877 CEP135Q66GS9 1140 aa13.89□□□□□ -0.19
COL5A1-206ENST00000465877 TPGS2Q68CL5 300 aa13.89□□□□□ -0.19
COL5A1-206ENST00000465877 SCARA3Q6AZY7 606 aa13.89□□□□□ -0.19
COL5A1-206ENST00000465877 TRAPPC11Q7Z392 1133 aa13.89□□□□□ -0.19
COL5A1-206ENST00000465877 METTL23Q86XA0 190 aa13.89□□□□□ -0.19
COL5A1-206ENST00000465877 ELOA2Q8IYF1 753 aaPredicted RBP13.89□□□□□ -0.19
COL5A1-206ENST00000465877 TDRD5Q8NAT2 981 aaKnown RBP13.89□□□□□ -0.19
COL5A1-206ENST00000465877 OR10T2Q8NGX3 314 aa13.89□□□□□ -0.19
COL5A1-206ENST00000465877 BORCS6Q96GS4 357 aa13.89□□□□□ -0.19
COL5A1-206ENST00000465877 PIDD1Q9HB75 910 aa13.89□□□□□ -0.19
COL5A1-206ENST00000465877 L1RE1Q9UN81 338 aa13.89□□□□□ -0.19
COL5A1-206ENST00000465877 GREB1Q4ZG55 1949 aa13.88□□□□□ -0.19
COL5A1-206ENST00000465877 PATJQ8NI35 1801 aa13.88□□□□□ -0.19
COL5A1-206ENST00000465877 PRRG1O14668 218 aa13.88□□□□□ -0.19
COL5A1-206ENST00000465877 ADCY1Q08828 1119 aa13.88□□□□□ -0.19
COL5A1-206ENST00000465877 MYO1EQ12965 1108 aa13.88□□□□□ -0.19
COL5A1-206ENST00000465877 UVSSAQ2YD98 709 aa13.88□□□□□ -0.19
COL5A1-206ENST00000465877 WSCD1Q658N2 575 aa13.88□□□□□ -0.19
COL5A1-206ENST00000465877 RNF19BQ6ZMZ0 732 aa13.88□□□□□ -0.19
COL5A1-206ENST00000465877 RTL10Q7L3V2 364 aa13.88□□□□□ -0.19
COL5A1-206ENST00000465877 GET4Q7L5D6 327 aaPredicted RBP13.88□□□□□ -0.19
COL5A1-206ENST00000465877 RNF135Q8IUD6 432 aa13.88□□□□□ -0.19
COL5A1-206ENST00000465877 TCEAL8Q8IYN2 117 aa13.88□□□□□ -0.19
COL5A1-206ENST00000465877 PDCL2Q8N4E4 241 aa13.88□□□□□ -0.19
COL5A1-206ENST00000465877 PARD3BQ8TEW8 1205 aa13.88□□□□□ -0.19
COL5A1-206ENST00000465877 PGLYRP2Q96PD5 576 aa13.88□□□□□ -0.19
COL5A1-206ENST00000465877 TMEM209Q96SK2 561 aa13.88□□□□□ -0.19
COL5A1-206ENST00000465877 RTP3Q9BQQ7 232 aa13.88□□□□□ -0.19
COL5A1-206ENST00000465877 CYP4F11Q9HBI6 524 aa13.88□□□□□ -0.19
COL5A1-206ENST00000465877 WDR6Q9NNW5 1121 aaKnown RBP13.88□□□□□ -0.19
COL5A1-206ENST00000465877 GDAP2Q9NXN4 497 aa13.88□□□□□ -0.19
COL5A1-206ENST00000465877 AFF4Q9UHB7 1163 aaKnown RBP13.88□□□□□ -0.19
COL5A1-206ENST00000465877 MUTYHQ9UIF7 546 aa13.88□□□□□ -0.19
COL5A1-206ENST00000465877 MAN1B1Q9UKM7 699 aa13.88□□□□□ -0.19
COL5A1-206ENST00000465877 USTQ9Y2C2 406 aa13.88□□□□□ -0.19
COL5A1-206ENST00000465877 FRMD4BQ9Y2L6 1034 aa13.88□□□□□ -0.19
COL5A1-206ENST00000465877 R3HCC1Q9Y3T6 440 aaKnown RBP13.88□□□□□ -0.19
COL5A1-206ENST00000465877 INSL5Q9Y5Q6 135 aa13.88□□□□□ -0.19
COL5A1-206ENST00000465877 SNX9Q9Y5X1 595 aa13.88□□□□□ -0.19
COL5A1-206ENST00000465877 MTMR11A4FU01 709 aa13.87□□□□□ -0.19
COL5A1-206ENST00000465877 MAPK13O15264 365 aa13.87□□□□□ -0.19
COL5A1-206ENST00000465877 HUS1O60921 280 aa13.87□□□□□ -0.19
COL5A1-206ENST00000465877 XYLBO75191 536 aa13.87□□□□□ -0.19
COL5A1-206ENST00000465877 SEC24AO95486 1093 aa13.87□□□□□ -0.19
COL5A1-206ENST00000465877 VNN2O95498 520 aa13.87□□□□□ -0.19
COL5A1-206ENST00000465877 LRG1P02750 347 aa13.87□□□□□ -0.19
COL5A1-206ENST00000465877 ELF1P32519 619 aa13.87□□□□□ -0.19
COL5A1-206ENST00000465877 PRCPP42785 496 aa13.87□□□□□ -0.19
COL5A1-206ENST00000465877 BIRC3Q13489 604 aa13.87□□□□□ -0.19
COL5A1-206ENST00000465877 EDRF1Q3B7T1 1238 aa13.87□□□□□ -0.19
COL5A1-206ENST00000465877 TDRD10Q5VZ19 366 aaKnown RBP13.87□□□□□ -0.19
COL5A1-206ENST00000465877 ADGRF2Q8IZF7 708 aa13.87□□□□□ -0.19
COL5A1-206ENST00000465877 HPDLQ96IR7 371 aa13.87□□□□□ -0.19
COL5A1-206ENST00000465877 GTPBP4Q9BZE4 634 aaKnown RBP13.87□□□□□ -0.19
COL5A1-206ENST00000465877 POLIQ9UNA4 740 aa13.87□□□□□ -0.19
COL5A1-206ENST00000465877 YIPF1Q9Y548 306 aa13.87□□□□□ -0.19
COL5A1-206ENST00000465877 MYO10Q9HD67 2058 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms