RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 PDSS2Q86YH6 399 aa7.15□□□□□ -1.26
SSB-207ENST00000465871 SLC17A8Q8NDX2 589 aa7.15□□□□□ -1.26
SSB-207ENST00000465871 NSUN7Q8NE18 718 aaKnown RBP7.15□□□□□ -1.26
SSB-207ENST00000465871 PGBD1Q96JS3 809 aa7.15□□□□□ -1.26
SSB-207ENST00000465871 SIDT1Q9NXL6 827 aaKnown RBP7.15□□□□□ -1.26
SSB-207ENST00000465871 ARPP21Q9UBL0 812 aaPredicted RBP7.15□□□□□ -1.26
SSB-207ENST00000465871 FRMD4BQ9Y2L6 1034 aa7.15□□□□□ -1.26
SSB-207ENST00000465871 ENTPD2Q9Y5L3 495 aa7.15□□□□□ -1.26
SSB-207ENST00000465871 E9PLN8 166 aa7.14□□□□□ -1.27
SSB-207ENST00000465871 RBMXL2O75526 392 aaKnown RBP7.14□□□□□ -1.27
SSB-207ENST00000465871 MALP21145 153 aa7.14□□□□□ -1.27
SSB-207ENST00000465871 GRIA3P42263 894 aa7.14□□□□□ -1.27
SSB-207ENST00000465871 PTPRRQ15256 657 aa7.14□□□□□ -1.27
SSB-207ENST00000465871 CCDC93Q567U6 631 aa7.14□□□□□ -1.27
SSB-207ENST00000465871 AKNAD1Q5T1N1 836 aa7.14□□□□□ -1.27
SSB-207ENST00000465871 SLC4A10Q6U841 1118 aa7.14□□□□□ -1.27
SSB-207ENST00000465871 TOR1AIP2Q8NFQ8 470 aa7.14□□□□□ -1.27
SSB-207ENST00000465871 MYCBPAPQ8TBZ2 947 aa7.14□□□□□ -1.27
SSB-207ENST00000465871 TFAP2BQ92481 460 aa7.14□□□□□ -1.27
SSB-207ENST00000465871 LRIG1Q96JA1 1093 aa7.14□□□□□ -1.27
SSB-207ENST00000465871 TIMP4Q99727 224 aa7.14□□□□□ -1.27
SSB-207ENST00000465871 SMOQ99835 787 aa7.14□□□□□ -1.27
SSB-207ENST00000465871 VRK1Q99986 396 aaPredicted RBP7.14□□□□□ -1.27
SSB-207ENST00000465871 VKORC1Q9BQB6 163 aa7.14□□□□□ -1.27
SSB-207ENST00000465871 IL17RBQ9NRM6 502 aa7.14□□□□□ -1.27
SSB-207ENST00000465871 F2RL2O00254 374 aa7.13□□□□□ -1.27
SSB-207ENST00000465871 PPP3CBP16298 524 aa7.13□□□□□ -1.27
SSB-207ENST00000465871 DSC2Q02487 901 aa7.13□□□□□ -1.27
SSB-207ENST00000465871 PTPN21Q16825 1174 aa7.13□□□□□ -1.27
SSB-207ENST00000465871 TXNRD1Q16881 649 aa7.13□□□□□ -1.27
SSB-207ENST00000465871 KHDC1Q4VXA5 237 aaKnown RBP7.13□□□□□ -1.27
SSB-207ENST00000465871 TSHZ1Q6ZSZ6 1077 aa7.13□□□□□ -1.27
SSB-207ENST00000465871 SCAMP4Q969E2 229 aa7.13□□□□□ -1.27
SSB-207ENST00000465871 TRIB1Q96RU8 372 aa7.13□□□□□ -1.27
SSB-207ENST00000465871 RLIMQ9NVW2 624 aa7.13□□□□□ -1.27
SSB-207ENST00000465871 KAT6AQ92794 2004 aa7.12□□□□□ -1.27
SSB-207ENST00000465871 TNKSO95271 1327 aa7.12□□□□□ -1.27
SSB-207ENST00000465871 NT5C1B-RDH14C9J2C7 533 aa7.12□□□□□ -1.27
SSB-207ENST00000465871 ADM5C9JUS6 153 aa7.12□□□□□ -1.27
SSB-207ENST00000465871 IGSF3O75054 1194 aa7.12□□□□□ -1.27
SSB-207ENST00000465871 GNAI3P08754 354 aa7.12□□□□□ -1.27
SSB-207ENST00000465871 WT1P19544 449 aaPredicted RBP7.12□□□□□ -1.27
SSB-207ENST00000465871 CYP2C19P33261 490 aa7.12□□□□□ -1.27
SSB-207ENST00000465871 NPTX2P47972 431 aa7.12□□□□□ -1.27
SSB-207ENST00000465871 FXR1P51114 621 aaKnown RBP eCLIP7.12□□□□□ -1.27
SSB-207ENST00000465871 GNAI1P63096 354 aa7.12□□□□□ -1.27
SSB-207ENST00000465871 ITIH3Q06033 890 aa7.12□□□□□ -1.27
SSB-207ENST00000465871 SNAPC2Q13487 334 aa7.12□□□□□ -1.27
SSB-207ENST00000465871 ODF1Q14990 250 aa7.12□□□□□ -1.27
SSB-207ENST00000465871 B3GALNT2Q8NCR0 500 aa7.12□□□□□ -1.27
SSB-207ENST00000465871 SARAFQ96BY9 339 aa7.12□□□□□ -1.27
SSB-207ENST00000465871 GNL3LQ9NVN8 582 aaKnown RBP7.12□□□□□ -1.27
SSB-207ENST00000465871 CADPSQ9ULU8 1353 aa7.11□□□□□ -1.27
SSB-207ENST00000465871 POLRMTO00411 1230 aaKnown RBP7.11□□□□□ -1.27
SSB-207ENST00000465871 CHRM2P08172 466 aa7.11□□□□□ -1.27
SSB-207ENST00000465871 CDK4P11802 303 aa7.11□□□□□ -1.27
SSB-207ENST00000465871 NXPH1P58417 271 aa7.11□□□□□ -1.27
SSB-207ENST00000465871 POC1BQ8TC44 478 aa7.11□□□□□ -1.27
SSB-207ENST00000465871 BRD9Q9H8M2 597 aa7.11□□□□□ -1.27
SSB-207ENST00000465871 CFAP97Q9P2B7 532 aa7.11□□□□□ -1.27
SSB-207ENST00000465871 ZRANB2O95218 330 aaKnown RBP eCLIP7.1□□□□□ -1.27
SSB-207ENST00000465871 CHEK2O96017 543 aa7.1□□□□□ -1.27
SSB-207ENST00000465871 GPD1P21695 349 aa7.1□□□□□ -1.27
SSB-207ENST00000465871 PROK1P58294 105 aa7.1□□□□□ -1.27
SSB-207ENST00000465871 MIER2Q8N344 545 aa7.1□□□□□ -1.27
SSB-207ENST00000465871 CPNE5Q9HCH3 593 aa7.1□□□□□ -1.27
SSB-207ENST00000465871 SPATA31A3Q5VYP0 1347 aa7.09□□□□□ -1.27
SSB-207ENST00000465871 WDR27A2RRH5 827 aa7.09□□□□□ -1.27
SSB-207ENST00000465871 ZNF785A8K8V0 405 aa7.09□□□□□ -1.27
SSB-207ENST00000465871 GJB1P08034 283 aa7.09□□□□□ -1.27
SSB-207ENST00000465871 ELFN1P0C7U0 828 aa7.09□□□□□ -1.27
SSB-207ENST00000465871 FTH1P19P0C7X4 201 aa7.09□□□□□ -1.27
SSB-207ENST00000465871 LPOP22079 712 aaPredicted RBP7.09□□□□□ -1.27
SSB-207ENST00000465871 SMARCA1P28370 1054 aa7.09□□□□□ -1.27
SSB-207ENST00000465871 EVA1CP58658 441 aa7.09□□□□□ -1.27
SSB-207ENST00000465871 PSMC1P62191 440 aaKnown RBP7.09□□□□□ -1.27
SSB-207ENST00000465871 FOXF2Q12947 444 aa7.09□□□□□ -1.27
SSB-207ENST00000465871 TSTD2Q5T7W7 516 aa7.09□□□□□ -1.27
SSB-207ENST00000465871 LRCH2Q5VUJ6 765 aa7.09□□□□□ -1.27
SSB-207ENST00000465871 ZNF788Q6ZQV5 615 aa7.09□□□□□ -1.27
SSB-207ENST00000465871 FAM9AQ8IZU1 332 aaPredicted RBP7.09□□□□□ -1.27
SSB-207ENST00000465871 C3orf20Q8ND61 904 aa7.09□□□□□ -1.27
SSB-207ENST00000465871 GPR35Q9HC97 309 aa7.09□□□□□ -1.27
SSB-207ENST00000465871 ETAA1Q9NY74 926 aa7.09□□□□□ -1.27
SSB-207ENST00000465871 POLHQ9Y253 713 aa7.09□□□□□ -1.27
SSB-207ENST00000465871 SPEF1Q9Y4P9 236 aa7.09□□□□□ -1.27
SSB-207ENST00000465871 WASHC2CQ9Y4E1 1318 aa7.08□□□□□ -1.28
SSB-207ENST00000465871 A0A0B4J269 797 aa7.08□□□□□ -1.28
SSB-207ENST00000465871 LRRC14BA6NHZ5 514 aa7.08□□□□□ -1.28
SSB-207ENST00000465871 LINC00473A8K010 186 aa7.08□□□□□ -1.28
SSB-207ENST00000465871 INO80B-WBP1J3KQ70 363 aa7.08□□□□□ -1.28
SSB-207ENST00000465871 DTNBO60941 627 aa7.08□□□□□ -1.28
SSB-207ENST00000465871 ARIH2O95376 493 aa7.08□□□□□ -1.28
SSB-207ENST00000465871 CCND1P24385 295 aa7.08□□□□□ -1.28
SSB-207ENST00000465871 PIK3CGP48736 1102 aa7.08□□□□□ -1.28
SSB-207ENST00000465871 HNRNPMP52272 730 aaKnown RBP eCLIP7.08□□□□□ -1.28
SSB-207ENST00000465871 SOX10P56693 466 aa7.08□□□□□ -1.28
SSB-207ENST00000465871 HNRNPA0Q13151 305 aaKnown RBP7.08□□□□□ -1.28
SSB-207ENST00000465871 TUBB3Q13509 450 aa7.08□□□□□ -1.28
SSB-207ENST00000465871 SRRM1Q8IYB3 904 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms