RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 TMPRSS9Q7Z410 1059 aa6.78□□□□□ -1.32
SMC4-205ENST00000465563 HASPINQ8TF76 798 aa6.78□□□□□ -1.32
SMC4-205ENST00000465563 LRIG1Q96JA1 1093 aa6.78□□□□□ -1.32
SMC4-205ENST00000465563 RNF7Q9UBF6 113 aa6.78□□□□□ -1.32
SMC4-205ENST00000465563 WNT6Q9Y6F9 365 aa6.78□□□□□ -1.32
SMC4-205ENST00000465563 CCDC154A6NI56 674 aa6.77□□□□□ -1.33
SMC4-205ENST00000465563 LINC00473A8K010 186 aa6.77□□□□□ -1.33
SMC4-205ENST00000465563 MT-CO1P00395 513 aa6.77□□□□□ -1.33
SMC4-205ENST00000465563 RPLP2P05387 115 aaKnown RBP6.77□□□□□ -1.33
SMC4-205ENST00000465563 EDNRBP24530 442 aa6.77□□□□□ -1.33
SMC4-205ENST00000465563 NPTX2P47972 431 aa6.77□□□□□ -1.33
SMC4-205ENST00000465563 C3orf36Q3SXR2 165 aa6.77□□□□□ -1.33
SMC4-205ENST00000465563 FAM153CQ494X1 144 aa6.77□□□□□ -1.33
SMC4-205ENST00000465563 KIAA1614Q5VZ46 1190 aa6.77□□□□□ -1.33
SMC4-205ENST00000465563 TAPT1Q6NXT6 567 aa6.77□□□□□ -1.33
SMC4-205ENST00000465563 TRIB1Q96RU8 372 aa6.77□□□□□ -1.33
SMC4-205ENST00000465563 HAPLN3Q96S86 360 aa6.77□□□□□ -1.33
SMC4-205ENST00000465563 SMOQ99835 787 aa6.77□□□□□ -1.33
SMC4-205ENST00000465563 MAN1C1Q9NR34 630 aa6.77□□□□□ -1.33
SMC4-205ENST00000465563 KLC4Q9NSK0 619 aa6.77□□□□□ -1.33
SMC4-205ENST00000465563 PCDHB1Q9Y5F3 818 aa6.77□□□□□ -1.33
SMC4-205ENST00000465563 WDR27A2RRH5 827 aa6.76□□□□□ -1.33
SMC4-205ENST00000465563 MANSC4A6NHS7 340 aaPredicted RBP6.76□□□□□ -1.33
SMC4-205ENST00000465563 XPOTO43592 962 aaKnown RBP6.76□□□□□ -1.33
SMC4-205ENST00000465563 HNRNPMP52272 730 aaKnown RBP eCLIP6.76□□□□□ -1.33
SMC4-205ENST00000465563 EXOSC10Q01780 885 aaKnown RBP6.76□□□□□ -1.33
SMC4-205ENST00000465563 KIF23Q02241 960 aaPredicted RBP6.76□□□□□ -1.33
SMC4-205ENST00000465563 AMIGO2Q86SJ2 522 aa6.76□□□□□ -1.33
SMC4-205ENST00000465563 ST3GAL5Q9UNP4 418 aa6.76□□□□□ -1.33
SMC4-205ENST00000465563 MRFAP1Q9Y605 127 aa6.76□□□□□ -1.33
SMC4-205ENST00000465563 WIPF3A6NGB9 483 aa6.75□□□□□ -1.33
SMC4-205ENST00000465563 GCOM1H8Y6P7 765 aaPredicted RBP6.75□□□□□ -1.33
SMC4-205ENST00000465563 PCDHGA12O60330 932 aa6.75□□□□□ -1.33
SMC4-205ENST00000465563 ERBB2P04626 1255 aa6.75□□□□□ -1.33
SMC4-205ENST00000465563 PRKCGP05129 697 aa6.75□□□□□ -1.33
SMC4-205ENST00000465563 ITPKBP27987 946 aa6.75□□□□□ -1.33
SMC4-205ENST00000465563 SYDE2Q5VT97 1194 aa6.75□□□□□ -1.33
SMC4-205ENST00000465563 FCRLBQ6BAA4 426 aa6.75□□□□□ -1.33
SMC4-205ENST00000465563 DPF1Q92782 380 aa6.75□□□□□ -1.33
SMC4-205ENST00000465563 KAT5Q92993 513 aa6.75□□□□□ -1.33
SMC4-205ENST00000465563 SCAMP4Q969E2 229 aa6.75□□□□□ -1.33
SMC4-205ENST00000465563 COA7Q96BR5 231 aa6.75□□□□□ -1.33
SMC4-205ENST00000465563 DMRTA2Q96SC8 542 aa6.75□□□□□ -1.33
SMC4-205ENST00000465563 PCDHGA9Q9Y5G4 932 aaKnown RBP6.75□□□□□ -1.33
SMC4-205ENST00000465563 PCDHGA8Q9Y5G5 932 aa6.75□□□□□ -1.33
SMC4-205ENST00000465563 PCDHGA7Q9Y5G6 932 aa6.75□□□□□ -1.33
SMC4-205ENST00000465563 PCDHGA6Q9Y5G7 932 aa6.75□□□□□ -1.33
SMC4-205ENST00000465563 PCDHGA3Q9Y5H0 932 aa6.75□□□□□ -1.33
SMC4-205ENST00000465563 NR2E3Q9Y5X4 410 aa6.75□□□□□ -1.33
SMC4-205ENST00000465563 SPATA31A3Q5VYP0 1347 aa6.75□□□□□ -1.33
SMC4-205ENST00000465563 A0A0B4J269 797 aa6.74□□□□□ -1.33
SMC4-205ENST00000465563 VWC2LB2RUY7 222 aa6.74□□□□□ -1.33
SMC4-205ENST00000465563 E9PLN8 166 aa6.74□□□□□ -1.33
SMC4-205ENST00000465563 POLRMTO00411 1230 aaKnown RBP6.74□□□□□ -1.33
SMC4-205ENST00000465563 URI1O94763 535 aaPredicted RBP6.74□□□□□ -1.33
SMC4-205ENST00000465563 MYBL2P10244 700 aa6.74□□□□□ -1.33
SMC4-205ENST00000465563 ZNF81P51508 661 aa6.74□□□□□ -1.33
SMC4-205ENST00000465563 TUBB3Q13509 450 aa6.74□□□□□ -1.33
SMC4-205ENST00000465563 EGFLAMQ63HQ2 1017 aa6.74□□□□□ -1.33
SMC4-205ENST00000465563 TTC7BQ86TV6 843 aa6.74□□□□□ -1.33
SMC4-205ENST00000465563 PDSS2Q86YH6 399 aa6.74□□□□□ -1.33
SMC4-205ENST00000465563 RASAL3Q86YV0 1011 aa6.74□□□□□ -1.33
SMC4-205ENST00000465563 FAM9AQ8IZU1 332 aaPredicted RBP6.74□□□□□ -1.33
SMC4-205ENST00000465563 POC1BQ8TC44 478 aa6.74□□□□□ -1.33
SMC4-205ENST00000465563 SCARB1Q8WTV0 552 aa6.74□□□□□ -1.33
SMC4-205ENST00000465563 VKORC1Q9BQB6 163 aa6.74□□□□□ -1.33
SMC4-205ENST00000465563 ATP8A1Q9Y2Q0 1164 aa6.74□□□□□ -1.33
SMC4-205ENST00000465563 CFAP20Q9Y6A4 193 aaKnown RBP6.74□□□□□ -1.33
SMC4-205ENST00000465563 ADGRA2Q96PE1 1338 aa6.74□□□□□ -1.33
SMC4-205ENST00000465563 F5H697 171 aa6.73□□□□□ -1.33
SMC4-205ENST00000465563 TRIAP1O43715 76 aa6.73□□□□□ -1.33
SMC4-205ENST00000465563 TTLL1O95922 423 aa6.73□□□□□ -1.33
SMC4-205ENST00000465563 MALP21145 153 aa6.73□□□□□ -1.33
SMC4-205ENST00000465563 ABCB5Q2M3G0 1257 aa6.73□□□□□ -1.33
SMC4-205ENST00000465563 CCDC93Q567U6 631 aa6.73□□□□□ -1.33
SMC4-205ENST00000465563 NSUN6Q8TEA1 469 aaKnown RBP6.73□□□□□ -1.33
SMC4-205ENST00000465563 FBXO41Q8TF61 875 aa6.73□□□□□ -1.33
SMC4-205ENST00000465563 DDB2Q92466 427 aa6.73□□□□□ -1.33
SMC4-205ENST00000465563 PBKQ96KB5 322 aa6.73□□□□□ -1.33
SMC4-205ENST00000465563 TEKT5Q96M29 485 aa6.73□□□□□ -1.33
SMC4-205ENST00000465563 VRK1Q99986 396 aaPredicted RBP6.73□□□□□ -1.33
SMC4-205ENST00000465563 C1QTNF7Q9BXJ2 289 aa6.73□□□□□ -1.33
SMC4-205ENST00000465563 BRD9Q9H8M2 597 aa6.73□□□□□ -1.33
SMC4-205ENST00000465563 GNL3LQ9NVN8 582 aaKnown RBP6.73□□□□□ -1.33
SMC4-205ENST00000465563 SIDT1Q9NXL6 827 aaKnown RBP6.73□□□□□ -1.33
SMC4-205ENST00000465563 ADAM21Q9UKJ8 722 aa6.73□□□□□ -1.33
SMC4-205ENST00000465563 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.73□□□□□ -1.33
SMC4-205ENST00000465563 AOX1Q06278 1338 aa6.73□□□□□ -1.33
SMC4-205ENST00000465563 F2RL2O00254 374 aa6.72□□□□□ -1.33
SMC4-205ENST00000465563 CELA2AP08217 269 aa6.72□□□□□ -1.33
SMC4-205ENST00000465563 CYP2C19P33261 490 aa6.72□□□□□ -1.33
SMC4-205ENST00000465563 KRT85P78386 507 aa6.72□□□□□ -1.33
SMC4-205ENST00000465563 KHDC1Q4VXA5 237 aaKnown RBP6.72□□□□□ -1.33
SMC4-205ENST00000465563 SLC30A10Q6XR72 485 aa6.72□□□□□ -1.33
SMC4-205ENST00000465563 C1QL2Q7Z5L3 287 aa6.72□□□□□ -1.33
SMC4-205ENST00000465563 ALG8Q9BVK2 526 aa6.72□□□□□ -1.33
SMC4-205ENST00000465563 TPSD1Q9BZJ3 242 aa6.72□□□□□ -1.33
SMC4-205ENST00000465563 SPC25Q9HBM1 224 aa6.72□□□□□ -1.33
SMC4-205ENST00000465563 RLIMQ9NVW2 624 aa6.72□□□□□ -1.33
SMC4-205ENST00000465563 TRHDEQ9UKU6 1024 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms