RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 SMRP1Q8NCR6 262 aa21.88■■□□□ 1.09
SKA3-205ENST00000465471 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.88■■□□□ 1.09
SKA3-205ENST00000465471 HDAC7Q8WUI4 952 aa21.88■■□□□ 1.09
SKA3-205ENST00000465471 MED15Q96RN5 788 aa21.88■■□□□ 1.09
SKA3-205ENST00000465471 DSEQ9UL01 958 aa21.88■■□□□ 1.09
SKA3-205ENST00000465471 TIMM13Q9Y5L4 95 aaPredicted RBP21.88■■□□□ 1.09
SKA3-205ENST00000465471 CYB561D2O14569 222 aa21.87■■□□□ 1.09
SKA3-205ENST00000465471 KRT13P13646 458 aa21.87■■□□□ 1.09
SKA3-205ENST00000465471 HOXB8P17481 243 aaPredicted RBP21.87■■□□□ 1.09
SKA3-205ENST00000465471 OR1D2P34982 312 aa21.87■■□□□ 1.09
SKA3-205ENST00000465471 AAK1Q2M2I8 961 aa21.87■■□□□ 1.09
SKA3-205ENST00000465471 DPCR1Q3MIW9 517 aa21.87■■□□□ 1.09
SKA3-205ENST00000465471 OVOS1Q6IE37 1185 aa21.87■■□□□ 1.09
SKA3-205ENST00000465471 EP400NLQ6ZTU2 488 aa21.87■■□□□ 1.09
SKA3-205ENST00000465471 GLYCTKQ8IVS8 523 aa21.87■■□□□ 1.09
SKA3-205ENST00000465471 HPDLQ96IR7 371 aa21.87■■□□□ 1.09
SKA3-205ENST00000465471 ASB2Q96Q27 587 aa21.87■■□□□ 1.09
SKA3-205ENST00000465471 OXCT2Q9BYC2 517 aaPredicted RBP21.87■■□□□ 1.09
SKA3-205ENST00000465471 XYLT2Q9H1B5 865 aa21.87■■□□□ 1.09
SKA3-205ENST00000465471 S1PR5Q9H228 398 aa21.87■■□□□ 1.09
SKA3-205ENST00000465471 VRTNQ9H8Y1 702 aa21.87■■□□□ 1.09
SKA3-205ENST00000465471 RWDD2AQ9UIY3 292 aa21.87■■□□□ 1.09
SKA3-205ENST00000465471 CD207Q9UJ71 328 aa21.87■■□□□ 1.09
SKA3-205ENST00000465471 FBXW11Q9UKB1 542 aa21.87■■□□□ 1.09
SKA3-205ENST00000465471 VNN1O95497 513 aa21.86■■□□□ 1.09
SKA3-205ENST00000465471 TRIM49P0CI25 452 aa21.86■■□□□ 1.09
SKA3-205ENST00000465471 TRIM49CP0CI26 452 aa21.86■■□□□ 1.09
SKA3-205ENST00000465471 NLRP12P59046 1061 aa21.86■■□□□ 1.09
SKA3-205ENST00000465471 ROR1Q01973 937 aa21.86■■□□□ 1.09
SKA3-205ENST00000465471 PPP3CAQ08209 521 aa21.86■■□□□ 1.09
SKA3-205ENST00000465471 MYO1EQ12965 1108 aa21.86■■□□□ 1.09
SKA3-205ENST00000465471 CTXN3Q4LDR2 81 aa21.86■■□□□ 1.09
SKA3-205ENST00000465471 SV2AQ7L0J3 742 aa21.86■■□□□ 1.09
SKA3-205ENST00000465471 FILIP1Q7Z7B0 1213 aa21.86■■□□□ 1.09
SKA3-205ENST00000465471 PALB2Q86YC2 1186 aa21.86■■□□□ 1.09
SKA3-205ENST00000465471 MAN1C1Q9NR34 630 aa21.86■■□□□ 1.09
SKA3-205ENST00000465471 L1RE1Q9UN81 338 aa21.86■■□□□ 1.09
SKA3-205ENST00000465471 WDR27A2RRH5 827 aa21.85■■□□□ 1.09
SKA3-205ENST00000465471 ABLIM3O94929 683 aa21.85■■□□□ 1.09
SKA3-205ENST00000465471 ATICP31939 592 aa21.85■■□□□ 1.09
SKA3-205ENST00000465471 GTF2H1P32780 548 aa21.85■■□□□ 1.09
SKA3-205ENST00000465471 KCNQ1P51787 676 aa21.85■■□□□ 1.09
SKA3-205ENST00000465471 STX17P56962 302 aa21.85■■□□□ 1.09
SKA3-205ENST00000465471 SMAD4Q13485 552 aaKnown RBP21.85■■□□□ 1.09
SKA3-205ENST00000465471 PUS10Q3MIT2 529 aaKnown RBP21.85■■□□□ 1.09
SKA3-205ENST00000465471 CCDC183Q5T5S1 534 aa21.85■■□□□ 1.09
SKA3-205ENST00000465471 WSCD1Q658N2 575 aa21.85■■□□□ 1.09
SKA3-205ENST00000465471 TOP6BLQ8N6T0 577 aa21.85■■□□□ 1.09
SKA3-205ENST00000465471 SPATA18Q8TC71 538 aa21.85■■□□□ 1.09
SKA3-205ENST00000465471 RTP3Q9BQQ7 232 aa21.85■■□□□ 1.09
SKA3-205ENST00000465471 PLEKHA4Q9H4M7 779 aa21.85■■□□□ 1.09
SKA3-205ENST00000465471 TMEM63CQ9P1W3 806 aa21.85■■□□□ 1.09
SKA3-205ENST00000465471 DPP7Q9UHL4 492 aa21.85■■□□□ 1.09
SKA3-205ENST00000465471 OR6C75A6NL08 312 aa21.84■■□□□ 1.09
SKA3-205ENST00000465471 MBTPS2O43462 519 aa21.84■■□□□ 1.09
SKA3-205ENST00000465471 MYL6P60660 151 aa21.84■■□□□ 1.09
SKA3-205ENST00000465471 BIRC3Q13489 604 aa21.84■■□□□ 1.09
SKA3-205ENST00000465471 NCOA4Q13772 614 aa21.84■■□□□ 1.09
SKA3-205ENST00000465471 DPH6Q7L8W6 267 aa21.84■■□□□ 1.09
SKA3-205ENST00000465471 TMEM86AQ8N2M4 240 aa21.84■■□□□ 1.09
SKA3-205ENST00000465471 PDCL2Q8N4E4 241 aa21.84■■□□□ 1.09
SKA3-205ENST00000465471 KREMEN2Q8NCW0 462 aa21.84■■□□□ 1.09
SKA3-205ENST00000465471 CMASQ8NFW8 434 aaPredicted RBP21.84■■□□□ 1.09
SKA3-205ENST00000465471 ZNF461Q8TAF7 563 aa21.84■■□□□ 1.09
SKA3-205ENST00000465471 SUSD6Q92537 303 aa21.84■■□□□ 1.09
SKA3-205ENST00000465471 SFXN1Q9H9B4 322 aa21.84■■□□□ 1.09
SKA3-205ENST00000465471 TMEM8AQ9HCN3 771 aa21.84■■□□□ 1.09
SKA3-205ENST00000465471 R3HCC1Q9Y3T6 440 aaKnown RBP21.84■■□□□ 1.09
SKA3-205ENST00000465471 SNX9Q9Y5X1 595 aa21.84■■□□□ 1.09
SKA3-205ENST00000465471 GRXCR2A6NFK2 248 aa21.83■■□□□ 1.09
SKA3-205ENST00000465471 BMP1P13497 986 aa21.83■■□□□ 1.09
SKA3-205ENST00000465471 GCLMP48507 274 aa21.83■■□□□ 1.09
SKA3-205ENST00000465471 MARSP56192 900 aaKnown RBP21.83■■□□□ 1.09
SKA3-205ENST00000465471 TRPC3Q13507 836 aa21.83■■□□□ 1.09
SKA3-205ENST00000465471 CLUL1Q15846 466 aa21.83■■□□□ 1.09
SKA3-205ENST00000465471 SOWAHAQ2M3V2 549 aa21.83■■□□□ 1.09
SKA3-205ENST00000465471 PTCRAQ6ISU1 281 aaPredicted RBP21.83■■□□□ 1.09
SKA3-205ENST00000465471 FRMD5Q7Z6J6 570 aa21.83■■□□□ 1.09
SKA3-205ENST00000465471 OR10T2Q8NGX3 314 aa21.83■■□□□ 1.09
SKA3-205ENST00000465471 SLC35C1Q96A29 364 aa21.83■■□□□ 1.09
SKA3-205ENST00000465471 SYAP1Q96A49 352 aaPredicted RBP21.83■■□□□ 1.09
SKA3-205ENST00000465471 RHOBTB2Q9BYZ6 727 aa21.83■■□□□ 1.09
SKA3-205ENST00000465471 METTL14Q9HCE5 456 aaKnown RBP21.83■■□□□ 1.09
SKA3-205ENST00000465471 ARMCX3Q9UH62 379 aaPredicted RBP21.83■■□□□ 1.09
SKA3-205ENST00000465471 VCANP13611 3396 aa21.83■■□□□ 1.08
SKA3-205ENST00000465471 C2orf16Q68DN1 1984 aa21.83■■□□□ 1.08
SKA3-205ENST00000465471 GABRDO14764 452 aa21.82■■□□□ 1.08
SKA3-205ENST00000465471 HUS1O60921 280 aa21.82■■□□□ 1.08
SKA3-205ENST00000465471 PHACTR2O75167 634 aa21.82■■□□□ 1.08
SKA3-205ENST00000465471 SPATA31D3P0C874 917 aa21.82■■□□□ 1.08
SKA3-205ENST00000465471 ITIH3Q06033 890 aa21.82■■□□□ 1.08
SKA3-205ENST00000465471 SMAD2Q15796 467 aaKnown RBP21.82■■□□□ 1.08
SKA3-205ENST00000465471 CT47A1Q5JQC4 288 aaPredicted RBP21.82■■□□□ 1.08
SKA3-205ENST00000465471 TPGS2Q68CL5 300 aa21.82■■□□□ 1.08
SKA3-205ENST00000465471 ELMSAN1Q6PJG2 1045 aa21.82■■□□□ 1.08
SKA3-205ENST00000465471 SPATA31D4Q6ZUB0 917 aa21.82■■□□□ 1.08
SKA3-205ENST00000465471 METTL23Q86XA0 190 aa21.82■■□□□ 1.08
SKA3-205ENST00000465471 C12orf76Q8N812 135 aaPredicted RBP21.82■■□□□ 1.08
SKA3-205ENST00000465471 KBTBD7Q8WVZ9 684 aa21.82■■□□□ 1.08
SKA3-205ENST00000465471 ADAM7Q9H2U9 754 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms