RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 AP3M2P53677 418 aa19.4■□□□□ 0.7
SYNE4-204ENST00000465425 CNTN2Q02246 1040 aa19.4■□□□□ 0.7
SYNE4-204ENST00000465425 CAPSQ13938 189 aa19.4■□□□□ 0.7
SYNE4-204ENST00000465425 ANGEL2Q5VTE6 544 aaKnown RBP19.4■□□□□ 0.7
SYNE4-204ENST00000465425 CYB5D1Q6P9G0 228 aa19.4■□□□□ 0.7
SYNE4-204ENST00000465425 DCUN1D2Q6PH85 259 aa19.4■□□□□ 0.7
SYNE4-204ENST00000465425 TRPM8Q7Z2W7 1104 aa19.4■□□□□ 0.7
SYNE4-204ENST00000465425 C9orf72Q96LT7 481 aa19.4■□□□□ 0.7
SYNE4-204ENST00000465425 RBM15Q96T37 977 aaKnown RBP eCLIP19.4■□□□□ 0.7
SYNE4-204ENST00000465425 ADCY3O60266 1144 aa19.4■□□□□ 0.7
SYNE4-204ENST00000465425 DNAJC8O75937 253 aaPredicted RBP19.4■□□□□ 0.7
SYNE4-204ENST00000465425 KRT1P04264 644 aa19.4■□□□□ 0.7
SYNE4-204ENST00000465425 EDN1P05305 212 aa19.4■□□□□ 0.7
SYNE4-204ENST00000465425 STAT4Q14765 748 aa19.4■□□□□ 0.7
SYNE4-204ENST00000465425 DNAJC24Q6P3W2 148 aa19.4■□□□□ 0.7
SYNE4-204ENST00000465425 FAM212AQ96EL1 285 aa19.4■□□□□ 0.7
SYNE4-204ENST00000465425 SGSM3Q96HU1 749 aa19.4■□□□□ 0.7
SYNE4-204ENST00000465425 MCEEQ96PE7 176 aa19.4■□□□□ 0.7
SYNE4-204ENST00000465425 MLXIPLQ9NP71 852 aa19.4■□□□□ 0.7
SYNE4-204ENST00000465425 ZNF148Q9UQR1 794 aa19.4■□□□□ 0.7
SYNE4-204ENST00000465425 SNX3O60493 162 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 KRT10P13645 584 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 KLRC2P26717 231 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 XRCC4Q13426 336 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 ATP13A4Q4VNC1 1196 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 SWT1Q5T5J6 900 aaKnown RBP19.39■□□□□ 0.69
SYNE4-204ENST00000465425 NUGGCQ68CJ6 796 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 HIBCHQ6NVY1 386 aaPredicted RBP19.39■□□□□ 0.69
SYNE4-204ENST00000465425 ANKS1BQ7Z6G8 1248 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 RELL1Q8IUW5 271 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 APOBEC3FQ8IUX4 373 aaKnown RBP19.39■□□□□ 0.69
SYNE4-204ENST00000465425 WDR49Q8IV35 697 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 BRSK2Q8IWQ3 736 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 CHST13Q8NET6 341 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 SLITRK1Q96PX8 696 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 FOXP3Q9BZS1 431 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 FGFR1OP2Q9NVK5 253 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 TMEM191CA6NGB0 347 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 LIASO43766 372 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 ASS1P00966 412 aaKnown RBP19.39■□□□□ 0.69
SYNE4-204ENST00000465425 CST3P01034 146 aaPredicted RBP19.39■□□□□ 0.69
SYNE4-204ENST00000465425 TMEM191BP0C7N4 346 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 UBA1P22314 1058 aaKnown RBP19.39■□□□□ 0.69
SYNE4-204ENST00000465425 FSTL1Q12841 308 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 ZNF394Q53GI3 561 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 CYP4F22Q6NT55 531 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 ZPBP2Q6X784 338 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 ARHGEF18Q6ZSZ5 1173 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 ZBTB33Q86T24 672 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 PRUNE1Q86TP1 453 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 SRRM1Q8IYB3 904 aaKnown RBP19.39■□□□□ 0.69
SYNE4-204ENST00000465425 ZCCHC9Q8N567 271 aaKnown RBP19.39■□□□□ 0.69
SYNE4-204ENST00000465425 GDAP1Q8TB36 358 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 NKIRAS1Q9NYS0 192 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 NAALADL1Q9UQQ1 740 aa19.39■□□□□ 0.69
SYNE4-204ENST00000465425 SRCAPQ6ZRS2 3230 aa19.38■□□□□ 0.69
SYNE4-204ENST00000465425 IGKV6D-21A0A0A0MT36 114 aa19.38■□□□□ 0.69
SYNE4-204ENST00000465425 LSM8O95777 96 aaKnown RBP19.38■□□□□ 0.69
SYNE4-204ENST00000465425 GSTA1P08263 222 aa19.38■□□□□ 0.69
SYNE4-204ENST00000465425 STX2P32856 288 aa19.38■□□□□ 0.69
SYNE4-204ENST00000465425 TNFSF9P41273 254 aa19.38■□□□□ 0.69
SYNE4-204ENST00000465425 STAT5BP51692 787 aa19.38■□□□□ 0.69
SYNE4-204ENST00000465425 ZNF132P52740 706 aa19.38■□□□□ 0.69
SYNE4-204ENST00000465425 PDE4CQ08493 712 aa19.38■□□□□ 0.69
SYNE4-204ENST00000465425 FAM160B1Q5W0V3 765 aa19.38■□□□□ 0.69
SYNE4-204ENST00000465425 PARP9Q8IXQ6 854 aa19.38■□□□□ 0.69
SYNE4-204ENST00000465425 TMEM35BQ8NCS4 154 aa19.38■□□□□ 0.69
SYNE4-204ENST00000465425 MTMR12Q9C0I1 747 aa19.38■□□□□ 0.69
SYNE4-204ENST00000465425 LGALS13Q9UHV8 139 aa19.38■□□□□ 0.69
SYNE4-204ENST00000465425 DNPEPQ9ULA0 475 aa19.38■□□□□ 0.69
SYNE4-204ENST00000465425 USP15Q9Y4E8 981 aaPredicted RBP19.38■□□□□ 0.69
SYNE4-204ENST00000465425 FOXO6A8MYZ6 492 aa19.37■□□□□ 0.69
SYNE4-204ENST00000465425 SUN1O94901 812 aa19.37■□□□□ 0.69
SYNE4-204ENST00000465425 MAGEA4P43358 317 aa19.37■□□□□ 0.69
SYNE4-204ENST00000465425 ALDH5A1P51649 535 aaPredicted RBP19.37■□□□□ 0.69
SYNE4-204ENST00000465425 EFNA5P52803 228 aa19.37■□□□□ 0.69
SYNE4-204ENST00000465425 MCL1Q07820 350 aa19.37■□□□□ 0.69
SYNE4-204ENST00000465425 MFSD7Q6UXD7 560 aa19.37■□□□□ 0.69
SYNE4-204ENST00000465425 KLRG1Q96E93 195 aa19.37■□□□□ 0.69
SYNE4-204ENST00000465425 CFAP57Q96MR6 1250 aa19.37■□□□□ 0.69
SYNE4-204ENST00000465425 MRPL4Q9BYD3 311 aaKnown RBP19.37■□□□□ 0.69
SYNE4-204ENST00000465425 CEP83Q9Y592 693 aa19.37■□□□□ 0.69
SYNE4-204ENST00000465425 IVNS1ABPQ9Y6Y0 642 aa19.37■□□□□ 0.69
SYNE4-204ENST00000465425 CHUKO15111 745 aa19.37■□□□□ 0.69
SYNE4-204ENST00000465425 TOM1L1O75674 476 aa19.37■□□□□ 0.69
SYNE4-204ENST00000465425 FARP2O94887 1054 aaPredicted RBP19.37■□□□□ 0.69
SYNE4-204ENST00000465425 TCF4P15884 667 aa19.37■□□□□ 0.69
SYNE4-204ENST00000465425 BRD2P25440 801 aaKnown RBP19.37■□□□□ 0.69
SYNE4-204ENST00000465425 RDXP35241 583 aaKnown RBP19.37■□□□□ 0.69
SYNE4-204ENST00000465425 TRPC3Q13507 836 aa19.37■□□□□ 0.69
SYNE4-204ENST00000465425 SNCBQ16143 134 aa19.37■□□□□ 0.69
SYNE4-204ENST00000465425 EAPPQ56P03 285 aaPredicted RBP19.37■□□□□ 0.69
SYNE4-204ENST00000465425 LRRC38Q5VT99 294 aa19.37■□□□□ 0.69
SYNE4-204ENST00000465425 CYP4X1Q8N118 509 aa19.37■□□□□ 0.69
SYNE4-204ENST00000465425 CKAP2Q8WWK9 683 aa19.37■□□□□ 0.69
SYNE4-204ENST00000465425 PRPF31Q8WWY3 499 aaKnown RBP19.37■□□□□ 0.69
SYNE4-204ENST00000465425 NIF3L1Q9GZT8 377 aa19.37■□□□□ 0.69
SYNE4-204ENST00000465425 PPP1R1BQ9UD71 204 aaPredicted RBP19.37■□□□□ 0.69
SYNE4-204ENST00000465425 SLC12A4Q9UP95 1085 aa19.37■□□□□ 0.69
SYNE4-204ENST00000465425 F8VP50 259 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms