RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 LEMD2Q8NC56 503 aa16.42■□□□□ 0.22
HDAC6-214ENST00000465269 UROC1Q96N76 676 aa16.42■□□□□ 0.22
HDAC6-214ENST00000465269 HSD17B14Q9BPX1 270 aa16.42■□□□□ 0.22
HDAC6-214ENST00000465269 ADPGKQ9BRR6 497 aa16.42■□□□□ 0.22
HDAC6-214ENST00000465269 GPR88Q9GZN0 384 aa16.42■□□□□ 0.22
HDAC6-214ENST00000465269 CCDC113Q9H0I3 377 aa16.42■□□□□ 0.22
HDAC6-214ENST00000465269 ATXN3LQ9H3M9 355 aa16.42■□□□□ 0.22
HDAC6-214ENST00000465269 HPS4Q9NQG7 708 aa16.42■□□□□ 0.22
HDAC6-214ENST00000465269 FSCN3Q9NQT6 498 aa16.42■□□□□ 0.22
HDAC6-214ENST00000465269 GKN1Q9NS71 199 aa16.42■□□□□ 0.22
HDAC6-214ENST00000465269 GJB4Q9NTQ9 266 aa16.42■□□□□ 0.22
HDAC6-214ENST00000465269 ANKEF1Q9NU02 776 aa16.42■□□□□ 0.22
HDAC6-214ENST00000465269 SLC27A5Q9Y2P5 690 aa16.42■□□□□ 0.22
HDAC6-214ENST00000465269 TIMM13Q9Y5L4 95 aaPredicted RBP16.42■□□□□ 0.22
HDAC6-214ENST00000465269 GRSF1Q12849 480 aaKnown RBP eCLIP16.41■□□□□ 0.22
HDAC6-214ENST00000465269 DUSP4Q13115 394 aa16.41■□□□□ 0.22
HDAC6-214ENST00000465269 MAPK6Q16659 721 aa16.41■□□□□ 0.22
HDAC6-214ENST00000465269 KRT25Q7Z3Z0 450 aa16.41■□□□□ 0.22
HDAC6-214ENST00000465269 NEK8Q86SG6 692 aa16.41■□□□□ 0.22
HDAC6-214ENST00000465269 DAGLBQ8NCG7 672 aa16.41■□□□□ 0.22
HDAC6-214ENST00000465269 RPLP0P6Q8NHW5 317 aa16.41■□□□□ 0.22
HDAC6-214ENST00000465269 BPIFB1Q8TDL5 484 aa16.41■□□□□ 0.22
HDAC6-214ENST00000465269 OXER1Q8TDS5 423 aa16.41■□□□□ 0.22
HDAC6-214ENST00000465269 PIGKQ92643 395 aa16.41■□□□□ 0.22
HDAC6-214ENST00000465269 EZH1Q92800 747 aaPredicted RBP16.41■□□□□ 0.22
HDAC6-214ENST00000465269 JAKMIP1Q96N16 626 aaKnown RBP16.41■□□□□ 0.22
HDAC6-214ENST00000465269 EBF3Q9H4W6 596 aa16.41■□□□□ 0.22
HDAC6-214ENST00000465269 NUB1Q9Y5A7 615 aa16.41■□□□□ 0.22
HDAC6-214ENST00000465269 NUP210Q8TEM1 1887 aaPredicted RBP16.4■□□□□ 0.22
HDAC6-214ENST00000465269 ACKR2O00590 384 aa16.4■□□□□ 0.22
HDAC6-214ENST00000465269 SYN3O14994 580 aa16.4■□□□□ 0.22
HDAC6-214ENST00000465269 ATG13O75143 517 aa16.4■□□□□ 0.22
HDAC6-214ENST00000465269 ARSAP15289 507 aa16.4■□□□□ 0.22
HDAC6-214ENST00000465269 GABRR2P28476 465 aa16.4■□□□□ 0.22
HDAC6-214ENST00000465269 PDIA3P30101 505 aaKnown RBP16.4■□□□□ 0.22
HDAC6-214ENST00000465269 DGKEP52429 567 aa16.4■□□□□ 0.22
HDAC6-214ENST00000465269 SCAPQ12770 1279 aa16.4■□□□□ 0.22
HDAC6-214ENST00000465269 TSGA10IPQ3SY00 556 aa16.4■□□□□ 0.22
HDAC6-214ENST00000465269 PMS2CLQ68D20 193 aa16.4■□□□□ 0.22
HDAC6-214ENST00000465269 PPP4R3AQ6IN85 833 aa16.4■□□□□ 0.22
HDAC6-214ENST00000465269 ZNF280DQ6N043 979 aa16.4■□□□□ 0.22
HDAC6-214ENST00000465269 PIK3AP1Q6ZUJ8 805 aa16.4■□□□□ 0.22
HDAC6-214ENST00000465269 CYP2U1Q7Z449 544 aa16.4■□□□□ 0.22
HDAC6-214ENST00000465269 CAMKK1Q8N5S9 505 aa16.4■□□□□ 0.22
HDAC6-214ENST00000465269 HNRNPLLQ8WVV9 542 aaKnown RBP16.4■□□□□ 0.22
HDAC6-214ENST00000465269 DDX12PQ92771 950 aa16.4■□□□□ 0.22
HDAC6-214ENST00000465269 LARP6Q9BRS8 491 aaKnown RBP16.4■□□□□ 0.22
HDAC6-214ENST00000465269 CCDC194A0A1B0GVG4 234 aa16.39■□□□□ 0.21
HDAC6-214ENST00000465269 LYPLA2O95372 231 aa16.39■□□□□ 0.21
HDAC6-214ENST00000465269 APBB3O95704 486 aa16.39■□□□□ 0.21
HDAC6-214ENST00000465269 DHPSP49366 369 aaPredicted RBP16.39■□□□□ 0.21
HDAC6-214ENST00000465269 SSRP1Q08945 709 aaKnown RBP16.39■□□□□ 0.21
HDAC6-214ENST00000465269 DMC1Q14565 340 aa16.39■□□□□ 0.21
HDAC6-214ENST00000465269 ARMCX6Q7L4S7 300 aa16.39■□□□□ 0.21
HDAC6-214ENST00000465269 SKAP1Q86WV1 359 aa16.39■□□□□ 0.21
HDAC6-214ENST00000465269 RIN3Q8TB24 985 aa16.39■□□□□ 0.21
HDAC6-214ENST00000465269 ADAM32Q8TC27 787 aa16.39■□□□□ 0.21
HDAC6-214ENST00000465269 TBC1D32Q96NH3 1257 aa16.39■□□□□ 0.21
HDAC6-214ENST00000465269 CCL26Q9Y258 94 aa16.39■□□□□ 0.21
HDAC6-214ENST00000465269 TRDMT1O14717 391 aaKnown RBP16.38■□□□□ 0.21
HDAC6-214ENST00000465269 PRB1P04280 392 aa16.38■□□□□ 0.21
HDAC6-214ENST00000465269 ATP2B1P20020 1258 aa16.38■□□□□ 0.21
HDAC6-214ENST00000465269 MCM4P33991 863 aa16.38■□□□□ 0.21
HDAC6-214ENST00000465269 MCM2P49736 904 aa16.38■□□□□ 0.21
HDAC6-214ENST00000465269 GALK1P51570 392 aa16.38■□□□□ 0.21
HDAC6-214ENST00000465269 EPHB3P54753 998 aa16.38■□□□□ 0.21
HDAC6-214ENST00000465269 DCAF4L1Q3SXM0 396 aa16.38■□□□□ 0.21
HDAC6-214ENST00000465269 TRIM61Q5EBN2 209 aa16.38■□□□□ 0.21
HDAC6-214ENST00000465269 ATF7IP2Q5U623 682 aa16.38■□□□□ 0.21
HDAC6-214ENST00000465269 DNAJB7Q7Z6W7 309 aaPredicted RBP16.38■□□□□ 0.21
HDAC6-214ENST00000465269 ATAD1Q8NBU5 361 aa16.38■□□□□ 0.21
HDAC6-214ENST00000465269 LRIG1Q96JA1 1093 aa16.38■□□□□ 0.21
HDAC6-214ENST00000465269 SUSD3Q96L08 255 aa16.38■□□□□ 0.21
HDAC6-214ENST00000465269 LPIN3Q9BQK8 851 aa16.38■□□□□ 0.21
HDAC6-214ENST00000465269 HECTD1Q9ULT8 2610 aa16.38■□□□□ 0.21
HDAC6-214ENST00000465269 ATXN2Q99700 1313 aaKnown RBP16.38■□□□□ 0.21
HDAC6-214ENST00000465269 ZNF462Q96JM2 2506 aa16.38■□□□□ 0.21
HDAC6-214ENST00000465269 GCFC2P16383 781 aaKnown RBP16.37■□□□□ 0.21
HDAC6-214ENST00000465269 PSMD2Q13200 908 aa16.37■□□□□ 0.21
HDAC6-214ENST00000465269 RUNX3Q13761 415 aa16.37■□□□□ 0.21
HDAC6-214ENST00000465269 KRT32Q14532 448 aa16.37■□□□□ 0.21
HDAC6-214ENST00000465269 KARSQ15046 597 aaKnown RBP16.37■□□□□ 0.21
HDAC6-214ENST00000465269 ALKAL1Q6UXT8 129 aa16.37■□□□□ 0.21
HDAC6-214ENST00000465269 PIP4P1Q86T03 277 aa16.37■□□□□ 0.21
HDAC6-214ENST00000465269 TRIM22Q8IYM9 498 aa16.37■□□□□ 0.21
HDAC6-214ENST00000465269 FRMD1Q8N878 549 aa16.37■□□□□ 0.21
HDAC6-214ENST00000465269 BEST2Q8NFU1 509 aa16.37■□□□□ 0.21
HDAC6-214ENST00000465269 DEPTORQ8TB45 409 aa16.37■□□□□ 0.21
HDAC6-214ENST00000465269 CRELD1Q96HD1 420 aa16.37■□□□□ 0.21
HDAC6-214ENST00000465269 FAM83CQ9BQN1 747 aa16.37■□□□□ 0.21
HDAC6-214ENST00000465269 SLC46A2Q9BY10 475 aa16.37■□□□□ 0.21
HDAC6-214ENST00000465269 C2orf40Q9H1Z8 148 aa16.37■□□□□ 0.21
HDAC6-214ENST00000465269 CDT1Q9H211 546 aa16.37■□□□□ 0.21
HDAC6-214ENST00000465269 SLC32A1Q9H598 525 aa16.37■□□□□ 0.21
HDAC6-214ENST00000465269 TMEM74BQ9NUR3 256 aa16.37■□□□□ 0.21
HDAC6-214ENST00000465269 MBD1Q9UIS9 605 aaPredicted RBP16.37■□□□□ 0.21
HDAC6-214ENST00000465269 PI4KAP42356 2102 aa16.36■□□□□ 0.21
HDAC6-214ENST00000465269 MYO16Q9Y6X6 1858 aa16.36■□□□□ 0.21
HDAC6-214ENST00000465269 WNT7AO00755 349 aa16.36■□□□□ 0.21
HDAC6-214ENST00000465269 HMGB1P09429 215 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms