RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 RBAKQ9NYW8 714 aaPredicted RBP18.86■□□□□ 0.61
CPSF4-209ENST00000465132 KLK14Q9P0G3 267 aa18.86■□□□□ 0.61
CPSF4-209ENST00000465132 FNIP2Q9P278 1114 aa18.86■□□□□ 0.61
CPSF4-209ENST00000465132 CPSF3Q9UKF6 684 aaKnown RBP18.86■□□□□ 0.61
CPSF4-209ENST00000465132 USP20Q9Y2K6 914 aa18.86■□□□□ 0.61
CPSF4-209ENST00000465132 DERAQ9Y315 318 aa18.86■□□□□ 0.61
CPSF4-209ENST00000465132 NARSO43776 548 aaKnown RBP18.85■□□□□ 0.61
CPSF4-209ENST00000465132 CD44P16070 742 aaKnown RBP18.85■□□□□ 0.61
CPSF4-209ENST00000465132 OSTNP61366 133 aa18.85■□□□□ 0.61
CPSF4-209ENST00000465132 CEP135Q66GS9 1140 aa18.85■□□□□ 0.61
CPSF4-209ENST00000465132 LILRA6Q6PI73 481 aa18.85■□□□□ 0.61
CPSF4-209ENST00000465132 CACTINQ8WUQ7 758 aaKnown RBP18.85■□□□□ 0.61
CPSF4-209ENST00000465132 RSAD2Q8WXG1 361 aa18.85■□□□□ 0.61
CPSF4-209ENST00000465132 RIN2Q8WYP3 895 aaPredicted RBP18.85■□□□□ 0.61
CPSF4-209ENST00000465132 FNBP1Q96RU3 617 aa18.85■□□□□ 0.61
CPSF4-209ENST00000465132 MYADMQ96S97 322 aa18.85■□□□□ 0.61
CPSF4-209ENST00000465132 PRR23AA6NEV1 266 aa18.84■□□□□ 0.61
CPSF4-209ENST00000465132 TADA2AO75478 443 aa18.84■□□□□ 0.61
CPSF4-209ENST00000465132 RECQL4O94761 1208 aa18.84■□□□□ 0.61
CPSF4-209ENST00000465132 ACOT2P49753 483 aa18.84■□□□□ 0.61
CPSF4-209ENST00000465132 AP3M2P53677 418 aa18.84■□□□□ 0.61
CPSF4-209ENST00000465132 CREMQ03060 361 aa18.84■□□□□ 0.61
CPSF4-209ENST00000465132 SPATA1Q5VX52 437 aa18.84■□□□□ 0.61
CPSF4-209ENST00000465132 TTI2Q6NXR4 508 aa18.84■□□□□ 0.61
CPSF4-209ENST00000465132 FILIP1Q7Z7B0 1213 aa18.84■□□□□ 0.61
CPSF4-209ENST00000465132 GLYCTKQ8IVS8 523 aa18.84■□□□□ 0.61
CPSF4-209ENST00000465132 BRSK2Q8IWQ3 736 aa18.84■□□□□ 0.61
CPSF4-209ENST00000465132 CCDC105Q8IYK2 499 aa18.84■□□□□ 0.61
CPSF4-209ENST00000465132 FAM186BQ8IYM0 893 aa18.84■□□□□ 0.61
CPSF4-209ENST00000465132 ANKRD20A12PQ8NF67 263 aa18.84■□□□□ 0.61
CPSF4-209ENST00000465132 ENOX1Q8TC92 643 aaKnown RBP18.84■□□□□ 0.61
CPSF4-209ENST00000465132 SAAL1Q96ER3 474 aa18.84■□□□□ 0.61
CPSF4-209ENST00000465132 RTP3Q9BQQ7 232 aa18.84■□□□□ 0.61
CPSF4-209ENST00000465132 PIDD1Q9HB75 910 aa18.84■□□□□ 0.61
CPSF4-209ENST00000465132 ZDHHC7Q9NXF8 308 aa18.84■□□□□ 0.61
CPSF4-209ENST00000465132 MAGEC2Q9UBF1 373 aaPredicted RBP18.84■□□□□ 0.61
CPSF4-209ENST00000465132 WNT16Q9UBV4 365 aa18.84■□□□□ 0.61
CPSF4-209ENST00000465132 R3HCC1Q9Y3T6 440 aaKnown RBP18.84■□□□□ 0.61
CPSF4-209ENST00000465132 BECN2A8MW95 431 aa18.83■□□□□ 0.6
CPSF4-209ENST00000465132 TISP43B9A030 160 aa18.83■□□□□ 0.6
CPSF4-209ENST00000465132 THP07101 528 aa18.83■□□□□ 0.6
CPSF4-209ENST00000465132 TPM2P07951 284 aa18.83■□□□□ 0.6
CPSF4-209ENST00000465132 RPL17P18621 184 aaKnown RBP18.83■□□□□ 0.6
CPSF4-209ENST00000465132 MYL5Q02045 173 aa18.83■□□□□ 0.6
CPSF4-209ENST00000465132 ANO6Q4KMQ2 910 aa18.83■□□□□ 0.6
CPSF4-209ENST00000465132 LRSAM1Q6UWE0 723 aa18.83■□□□□ 0.6
CPSF4-209ENST00000465132 FRMD5Q7Z6J6 570 aa18.83■□□□□ 0.6
CPSF4-209ENST00000465132 SLC44A3Q8N4M1 653 aa18.83■□□□□ 0.6
CPSF4-209ENST00000465132 NXPE3Q969Y0 559 aa18.83■□□□□ 0.6
CPSF4-209ENST00000465132 PAAF1Q9BRP4 392 aa18.83■□□□□ 0.6
CPSF4-209ENST00000465132 PRKD2Q9BZL6 878 aa18.83■□□□□ 0.6
CPSF4-209ENST00000465132 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.83■□□□□ 0.6
CPSF4-209ENST00000465132 CACNG4Q9UBN1 327 aa18.83■□□□□ 0.6
CPSF4-209ENST00000465132 TDRD15B5MCY1 1934 aaKnown RBP18.82■□□□□ 0.6
CPSF4-209ENST00000465132 SF3B1O75533 1304 aaKnown RBP eCLIP18.82■□□□□ 0.6
CPSF4-209ENST00000465132 IKBKBO14920 756 aa18.82■□□□□ 0.6
CPSF4-209ENST00000465132 FAM189A1O60320 539 aa18.82■□□□□ 0.6
CPSF4-209ENST00000465132 ADRB2P07550 413 aa18.82■□□□□ 0.6
CPSF4-209ENST00000465132 CFHP08603 1231 aa18.82■□□□□ 0.6
CPSF4-209ENST00000465132 KCNE1P15382 129 aa18.82■□□□□ 0.6
CPSF4-209ENST00000465132 ZNF165P49910 485 aa18.82■□□□□ 0.6
CPSF4-209ENST00000465132 STX17P56962 302 aa18.82■□□□□ 0.6
CPSF4-209ENST00000465132 SPAG1Q07617 926 aa18.82■□□□□ 0.6
CPSF4-209ENST00000465132 TUSC3Q13454 348 aa18.82■□□□□ 0.6
CPSF4-209ENST00000465132 CCDC40Q4G0X9 1142 aa18.82■□□□□ 0.6
CPSF4-209ENST00000465132 RTP2Q5QGT7 225 aa18.82■□□□□ 0.6
CPSF4-209ENST00000465132 PRSS55Q6UWB4 352 aaPredicted RBP18.82■□□□□ 0.6
CPSF4-209ENST00000465132 ZC3H3Q8IXZ2 948 aaKnown RBP18.82■□□□□ 0.6
CPSF4-209ENST00000465132 DTWD2Q8NBA8 298 aa18.82■□□□□ 0.6
CPSF4-209ENST00000465132 TMC2Q8TDI7 906 aa18.82■□□□□ 0.6
CPSF4-209ENST00000465132 FAM212AQ96EL1 285 aa18.82■□□□□ 0.6
CPSF4-209ENST00000465132 SNX27Q96L92 541 aa18.82■□□□□ 0.6
CPSF4-209ENST00000465132 UROC1Q96N76 676 aa18.82■□□□□ 0.6
CPSF4-209ENST00000465132 HAPLN2Q9GZV7 340 aa18.82■□□□□ 0.6
CPSF4-209ENST00000465132 GZF1Q9H116 711 aaPredicted RBP18.82■□□□□ 0.6
CPSF4-209ENST00000465132 DNAJC25Q9H1X3 360 aa18.82■□□□□ 0.6
CPSF4-209ENST00000465132 TSPY26PQ9H489 355 aa18.82■□□□□ 0.6
CPSF4-209ENST00000465132 THAP9Q9H5L6 903 aa18.82■□□□□ 0.6
CPSF4-209ENST00000465132 CNTN3Q9P232 1028 aa18.82■□□□□ 0.6
CPSF4-209ENST00000465132 ARMCX3Q9UH62 379 aaPredicted RBP18.82■□□□□ 0.6
CPSF4-209ENST00000465132 C2CD2Q9Y426 696 aa18.82■□□□□ 0.6
CPSF4-209ENST00000465132 MYO15AQ9UKN7 3530 aa18.81■□□□□ 0.6
CPSF4-209ENST00000465132 TTC26A0AVF1 554 aa18.81■□□□□ 0.6
CPSF4-209ENST00000465132 KRBA1A5PL33 1030 aa18.81■□□□□ 0.6
CPSF4-209ENST00000465132 GOLGA8IPA6NC78 632 aa18.81■□□□□ 0.6
CPSF4-209ENST00000465132 TRIM49BA6NDI0 452 aa18.81■□□□□ 0.6
CPSF4-209ENST00000465132 GOLGA8JA6NMD2 632 aa18.81■□□□□ 0.6
CPSF4-209ENST00000465132 PTGESO14684 152 aa18.81■□□□□ 0.6
CPSF4-209ENST00000465132 ZMYND10O75800 440 aa18.81■□□□□ 0.6
CPSF4-209ENST00000465132 CXCL8P10145 99 aa18.81■□□□□ 0.6
CPSF4-209ENST00000465132 SRFP11831 508 aa18.81■□□□□ 0.6
CPSF4-209ENST00000465132 LAMP2P13473 410 aa18.81■□□□□ 0.6
CPSF4-209ENST00000465132 PAX3P23760 479 aa18.81■□□□□ 0.6
CPSF4-209ENST00000465132 ZNF445P59923 1031 aa18.81■□□□□ 0.6
CPSF4-209ENST00000465132 PSMD6Q15008 389 aa18.81■□□□□ 0.6
CPSF4-209ENST00000465132 ENOX2Q16206 610 aaKnown RBP18.81■□□□□ 0.6
CPSF4-209ENST00000465132 SLC10A6Q3KNW5 377 aa18.81■□□□□ 0.6
CPSF4-209ENST00000465132 XKR4Q5GH76 650 aa18.81■□□□□ 0.6
CPSF4-209ENST00000465132 ALKAL1Q6UXT8 129 aa18.81■□□□□ 0.6
CPSF4-209ENST00000465132 CEP120Q8N960 986 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms