RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 KMT5AQ9NQR1 393 aa5.49□□□□□ -1.53
ITGB1-208ENST00000464001 TRHDEQ9UKU6 1024 aa5.49□□□□□ -1.53
ITGB1-208ENST00000464001 PCDHGA9Q9Y5G4 932 aaKnown RBP5.49□□□□□ -1.53
ITGB1-208ENST00000464001 PCDHGA8Q9Y5G5 932 aa5.49□□□□□ -1.53
ITGB1-208ENST00000464001 PCDHGA7Q9Y5G6 932 aa5.49□□□□□ -1.53
ITGB1-208ENST00000464001 PCDHGA6Q9Y5G7 932 aa5.49□□□□□ -1.53
ITGB1-208ENST00000464001 PCDHGA3Q9Y5H0 932 aa5.49□□□□□ -1.53
ITGB1-208ENST00000464001 CFAP20Q9Y6A4 193 aaKnown RBP5.49□□□□□ -1.53
ITGB1-208ENST00000464001 EDNRBP24530 442 aa5.48□□□□□ -1.53
ITGB1-208ENST00000464001 ITIH3Q06033 890 aa5.48□□□□□ -1.53
ITGB1-208ENST00000464001 ITKQ08881 620 aa5.48□□□□□ -1.53
ITGB1-208ENST00000464001 FOXF2Q12947 444 aa5.48□□□□□ -1.53
ITGB1-208ENST00000464001 ABCB5Q2M3G0 1257 aa5.48□□□□□ -1.53
ITGB1-208ENST00000464001 TSTD2Q5T7W7 516 aa5.48□□□□□ -1.53
ITGB1-208ENST00000464001 RNF187Q5TA31 235 aaPredicted RBP5.48□□□□□ -1.53
ITGB1-208ENST00000464001 ZNF788Q6ZQV5 615 aa5.48□□□□□ -1.53
ITGB1-208ENST00000464001 PTF1AQ7RTS3 328 aa5.48□□□□□ -1.53
ITGB1-208ENST00000464001 KAT5Q92993 513 aa5.48□□□□□ -1.53
ITGB1-208ENST00000464001 SARAFQ96BY9 339 aa5.48□□□□□ -1.53
ITGB1-208ENST00000464001 TEKT5Q96M29 485 aa5.48□□□□□ -1.53
ITGB1-208ENST00000464001 TRIB1Q96RU8 372 aa5.48□□□□□ -1.53
ITGB1-208ENST00000464001 SIDT1Q9NXL6 827 aaKnown RBP5.48□□□□□ -1.53
ITGB1-208ENST00000464001 SLC45A2Q9UMX9 530 aa5.48□□□□□ -1.53
ITGB1-208ENST00000464001 PCDHB1Q9Y5F3 818 aa5.48□□□□□ -1.53
ITGB1-208ENST00000464001 ADM5C9JUS6 153 aa5.47□□□□□ -1.53
ITGB1-208ENST00000464001 PPM1GO15355 546 aaPredicted RBP5.47□□□□□ -1.53
ITGB1-208ENST00000464001 CHRM2P08172 466 aa5.47□□□□□ -1.53
ITGB1-208ENST00000464001 PPP3CBP16298 524 aa5.47□□□□□ -1.53
ITGB1-208ENST00000464001 CYP2C19P33261 490 aa5.47□□□□□ -1.53
ITGB1-208ENST00000464001 NPTX2P47972 431 aa5.47□□□□□ -1.53
ITGB1-208ENST00000464001 ATXN1P54253 815 aaKnown RBP5.47□□□□□ -1.53
ITGB1-208ENST00000464001 KHDC1Q4VXA5 237 aaKnown RBP5.47□□□□□ -1.53
ITGB1-208ENST00000464001 EFCAB2Q5VUJ9 269 aa5.47□□□□□ -1.53
ITGB1-208ENST00000464001 TAPT1Q6NXT6 567 aa5.47□□□□□ -1.53
ITGB1-208ENST00000464001 TMPRSS9Q7Z410 1059 aa5.47□□□□□ -1.53
ITGB1-208ENST00000464001 PDSS2Q86YH6 399 aa5.47□□□□□ -1.53
ITGB1-208ENST00000464001 MYCBPAPQ8TBZ2 947 aa5.47□□□□□ -1.53
ITGB1-208ENST00000464001 SCAMP4Q969E2 229 aa5.47□□□□□ -1.53
ITGB1-208ENST00000464001 DMRTA2Q96SC8 542 aa5.47□□□□□ -1.53
ITGB1-208ENST00000464001 GNL3LQ9NVN8 582 aaKnown RBP5.47□□□□□ -1.53
ITGB1-208ENST00000464001 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.47□□□□□ -1.53
ITGB1-208ENST00000464001 SPATA31A3Q5VYP0 1347 aa5.47□□□□□ -1.53
ITGB1-208ENST00000464001 POLRMTO00411 1230 aaKnown RBP5.46□□□□□ -1.54
ITGB1-208ENST00000464001 GNAI3P08754 354 aa5.46□□□□□ -1.54
ITGB1-208ENST00000464001 MALP21145 153 aa5.46□□□□□ -1.54
ITGB1-208ENST00000464001 SMARCA1P28370 1054 aa5.46□□□□□ -1.54
ITGB1-208ENST00000464001 GNAI1P63096 354 aa5.46□□□□□ -1.54
ITGB1-208ENST00000464001 MC2RQ01718 297 aa5.46□□□□□ -1.54
ITGB1-208ENST00000464001 MTMR1Q13613 665 aa5.46□□□□□ -1.54
ITGB1-208ENST00000464001 PCBP2Q15366 365 aaKnown RBP eCLIP5.46□□□□□ -1.54
ITGB1-208ENST00000464001 TXNRD1Q16881 649 aa5.46□□□□□ -1.54
ITGB1-208ENST00000464001 UAP1L1Q3KQV9 507 aa5.46□□□□□ -1.54
ITGB1-208ENST00000464001 FAM153CQ494X1 144 aa5.46□□□□□ -1.54
ITGB1-208ENST00000464001 PNMA8AQ86V59 439 aaPredicted RBP5.46□□□□□ -1.54
ITGB1-208ENST00000464001 POC1BQ8TC44 478 aa5.46□□□□□ -1.54
ITGB1-208ENST00000464001 NSUN6Q8TEA1 469 aaKnown RBP5.46□□□□□ -1.54
ITGB1-208ENST00000464001 MTMR8Q96EF0 704 aa5.46□□□□□ -1.54
ITGB1-208ENST00000464001 LRIG1Q96JA1 1093 aa5.46□□□□□ -1.54
ITGB1-208ENST00000464001 HAPLN3Q96S86 360 aa5.46□□□□□ -1.54
ITGB1-208ENST00000464001 VRK1Q99986 396 aaPredicted RBP5.46□□□□□ -1.54
ITGB1-208ENST00000464001 BRD9Q9H8M2 597 aa5.46□□□□□ -1.54
ITGB1-208ENST00000464001 KLC4Q9NSK0 619 aa5.46□□□□□ -1.54
ITGB1-208ENST00000464001 RLIMQ9NVW2 624 aa5.46□□□□□ -1.54
ITGB1-208ENST00000464001 F5H697 171 aa5.45□□□□□ -1.54
ITGB1-208ENST00000464001 GCOM1H8Y6P7 765 aaPredicted RBP5.45□□□□□ -1.54
ITGB1-208ENST00000464001 F2RL2O00254 374 aa5.45□□□□□ -1.54
ITGB1-208ENST00000464001 GABRDO14764 452 aa5.45□□□□□ -1.54
ITGB1-208ENST00000464001 TRIAP1O43715 76 aa5.45□□□□□ -1.54
ITGB1-208ENST00000464001 ABCG1P45844 678 aa5.45□□□□□ -1.54
ITGB1-208ENST00000464001 ADKP55263 362 aaKnown RBP5.45□□□□□ -1.54
ITGB1-208ENST00000464001 SRSF4Q08170 494 aaKnown RBP5.45□□□□□ -1.54
ITGB1-208ENST00000464001 SNAPC2Q13487 334 aa5.45□□□□□ -1.54
ITGB1-208ENST00000464001 CCDC93Q567U6 631 aa5.45□□□□□ -1.54
ITGB1-208ENST00000464001 KIAA1614Q5VZ46 1190 aa5.45□□□□□ -1.54
ITGB1-208ENST00000464001 FAM9AQ8IZU1 332 aaPredicted RBP5.45□□□□□ -1.54
ITGB1-208ENST00000464001 SH2D3CQ8N5H7 860 aa5.45□□□□□ -1.54
ITGB1-208ENST00000464001 POLR3GLQ9BT43 218 aa5.45□□□□□ -1.54
ITGB1-208ENST00000464001 CCDC8Q9H0W5 538 aaPredicted RBP5.45□□□□□ -1.54
ITGB1-208ENST00000464001 CFAP97Q9P2B7 532 aa5.45□□□□□ -1.54
ITGB1-208ENST00000464001 NR2E3Q9Y5X4 410 aa5.45□□□□□ -1.54
ITGB1-208ENST00000464001 WNT6Q9Y6F9 365 aa5.45□□□□□ -1.54
ITGB1-208ENST00000464001 A0A0B4J269 797 aa5.44□□□□□ -1.54
ITGB1-208ENST00000464001 LINC00473A8K010 186 aa5.44□□□□□ -1.54
ITGB1-208ENST00000464001 FZD9O00144 591 aa5.44□□□□□ -1.54
ITGB1-208ENST00000464001 SOAT2O75908 522 aa5.44□□□□□ -1.54
ITGB1-208ENST00000464001 TTLL1O95922 423 aa5.44□□□□□ -1.54
ITGB1-208ENST00000464001 CHEK2O96017 543 aa5.44□□□□□ -1.54
ITGB1-208ENST00000464001 ELFN1P0C7U0 828 aa5.44□□□□□ -1.54
ITGB1-208ENST00000464001 HNRNPMP52272 730 aaKnown RBP eCLIP5.44□□□□□ -1.54
ITGB1-208ENST00000464001 PROK1P58294 105 aa5.44□□□□□ -1.54
ITGB1-208ENST00000464001 TUBB3Q13509 450 aa5.44□□□□□ -1.54
ITGB1-208ENST00000464001 SLC4A10Q6U841 1118 aa5.44□□□□□ -1.54
ITGB1-208ENST00000464001 SLC30A10Q6XR72 485 aa5.44□□□□□ -1.54
ITGB1-208ENST00000464001 HASPINQ8TF76 798 aa5.44□□□□□ -1.54
ITGB1-208ENST00000464001 ANKS1AQ92625 1134 aa5.44□□□□□ -1.54
ITGB1-208ENST00000464001 SIK2Q9H0K1 926 aa5.44□□□□□ -1.54
ITGB1-208ENST00000464001 ST3GAL5Q9UNP4 418 aa5.44□□□□□ -1.54
ITGB1-208ENST00000464001 POLHQ9Y253 713 aa5.44□□□□□ -1.54
ITGB1-208ENST00000464001 WDR27A2RRH5 827 aa5.43□□□□□ -1.54
ITGB1-208ENST00000464001 ZNF785A8K8V0 405 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms