RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 TMEM209Q96SK2 561 aa20.41■□□□□ 0.86
SF3A1-205ENST00000463818 CRISPLD1Q9H336 500 aa20.41■□□□□ 0.86
SF3A1-205ENST00000463818 ASAH2Q9NR71 780 aa20.41■□□□□ 0.86
SF3A1-205ENST00000463818 DLGAP2Q9P1A6 1054 aa20.41■□□□□ 0.86
SF3A1-205ENST00000463818 SLC27A5Q9Y2P5 690 aa20.41■□□□□ 0.86
SF3A1-205ENST00000463818 YIPF1Q9Y548 306 aa20.41■□□□□ 0.86
SF3A1-205ENST00000463818 KANSL1LA0AUZ9 987 aa20.4■□□□□ 0.86
SF3A1-205ENST00000463818 TULP1O00294 542 aaPredicted RBP20.4■□□□□ 0.86
SF3A1-205ENST00000463818 GJA1P17302 382 aa20.4■□□□□ 0.86
SF3A1-205ENST00000463818 EPHA5P54756 1037 aa20.4■□□□□ 0.86
SF3A1-205ENST00000463818 ASCL5Q7RTU5 278 aa20.4■□□□□ 0.86
SF3A1-205ENST00000463818 LEMD2Q8NC56 503 aa20.4■□□□□ 0.86
SF3A1-205ENST00000463818 ZSWIM2Q8NEG5 633 aa20.4■□□□□ 0.86
SF3A1-205ENST00000463818 PJA1Q8NG27 643 aa20.4■□□□□ 0.86
SF3A1-205ENST00000463818 SNX21Q969T3 373 aa20.4■□□□□ 0.86
SF3A1-205ENST00000463818 ZNF396Q96N95 335 aaPredicted RBP20.4■□□□□ 0.86
SF3A1-205ENST00000463818 DDX23Q9BUQ8 820 aaKnown RBP20.4■□□□□ 0.86
SF3A1-205ENST00000463818 ZFP14Q9HCL3 533 aa20.4■□□□□ 0.86
SF3A1-205ENST00000463818 OLFML3Q9NRN5 406 aa20.4■□□□□ 0.86
SF3A1-205ENST00000463818 PANK4Q9NVE7 773 aa20.4■□□□□ 0.86
SF3A1-205ENST00000463818 FRMD3A2A2Y4 597 aa20.39■□□□□ 0.85
SF3A1-205ENST00000463818 CYB561D2O14569 222 aa20.39■□□□□ 0.85
SF3A1-205ENST00000463818 SPTLC2O15270 562 aa20.39■□□□□ 0.85
SF3A1-205ENST00000463818 LRRN2O75325 713 aa20.39■□□□□ 0.85
SF3A1-205ENST00000463818 IL18RAPO95256 599 aa20.39■□□□□ 0.85
SF3A1-205ENST00000463818 CYP11A1P05108 521 aa20.39■□□□□ 0.85
SF3A1-205ENST00000463818 GLULP15104 373 aa20.39■□□□□ 0.85
SF3A1-205ENST00000463818 FCARP24071 287 aa20.39■□□□□ 0.85
SF3A1-205ENST00000463818 ALDH1A3P47895 512 aa20.39■□□□□ 0.85
SF3A1-205ENST00000463818 TAF6P49848 677 aa20.39■□□□□ 0.85
SF3A1-205ENST00000463818 CASP5P51878 434 aa20.39■□□□□ 0.85
SF3A1-205ENST00000463818 EPHB3P54753 998 aa20.39■□□□□ 0.85
SF3A1-205ENST00000463818 PLD1Q13393 1074 aa20.39■□□□□ 0.85
SF3A1-205ENST00000463818 EFCAB13Q8IY85 973 aa20.39■□□□□ 0.85
SF3A1-205ENST00000463818 SYCP3Q8IZU3 236 aa20.39■□□□□ 0.85
SF3A1-205ENST00000463818 ASB16Q96NS5 453 aa20.39■□□□□ 0.85
SF3A1-205ENST00000463818 FAM213AQ9BRX8 229 aa20.39■□□□□ 0.85
SF3A1-205ENST00000463818 LRRC3Q9BY71 257 aa20.39■□□□□ 0.85
SF3A1-205ENST00000463818 DSEQ9UL01 958 aa20.39■□□□□ 0.85
SF3A1-205ENST00000463818 MTMR11A4FU01 709 aa20.38■□□□□ 0.85
SF3A1-205ENST00000463818 FAM170BA6NMN3 283 aa20.38■□□□□ 0.85
SF3A1-205ENST00000463818 CD72P21854 359 aa20.38■□□□□ 0.85
SF3A1-205ENST00000463818 TEAD2Q15562 447 aa20.38■□□□□ 0.85
SF3A1-205ENST00000463818 FOXD4L5Q5VV16 416 aaPredicted RBP20.38■□□□□ 0.85
SF3A1-205ENST00000463818 METTL23Q86XA0 190 aa20.38■□□□□ 0.85
SF3A1-205ENST00000463818 NT5DC4Q86YG4 428 aa20.38■□□□□ 0.85
SF3A1-205ENST00000463818 OR10T2Q8NGX3 314 aa20.38■□□□□ 0.85
SF3A1-205ENST00000463818 FOXD4L4Q8WXT5 416 aaPredicted RBP20.38■□□□□ 0.85
SF3A1-205ENST00000463818 SMARCD2Q92925 531 aa20.38■□□□□ 0.85
SF3A1-205ENST00000463818 SAAL1Q96ER3 474 aa20.38■□□□□ 0.85
SF3A1-205ENST00000463818 BORCS6Q96GS4 357 aa20.38■□□□□ 0.85
SF3A1-205ENST00000463818 PYM1Q9BRP8 204 aaKnown RBP20.38■□□□□ 0.85
SF3A1-205ENST00000463818 FGFBP2Q9BYJ0 223 aa20.38■□□□□ 0.85
SF3A1-205ENST00000463818 DNAJC25Q9H1X3 360 aa20.38■□□□□ 0.85
SF3A1-205ENST00000463818 MTF2Q9Y483 593 aaPredicted RBP20.38■□□□□ 0.85
SF3A1-205ENST00000463818 PRR23AA6NEV1 266 aa20.37■□□□□ 0.85
SF3A1-205ENST00000463818 PPP6R2O75170 966 aa20.37■□□□□ 0.85
SF3A1-205ENST00000463818 PRPF6O94906 941 aaKnown RBP20.37■□□□□ 0.85
SF3A1-205ENST00000463818 LDHAP00338 332 aaKnown RBP20.37■□□□□ 0.85
SF3A1-205ENST00000463818 GARTP22102 1010 aa20.37■□□□□ 0.85
SF3A1-205ENST00000463818 WNT7BP56706 349 aa20.37■□□□□ 0.85
SF3A1-205ENST00000463818 ALCAMQ13740 583 aa20.37■□□□□ 0.85
SF3A1-205ENST00000463818 GRM2Q14416 872 aa20.37■□□□□ 0.85
SF3A1-205ENST00000463818 UBXN2BQ14CS0 331 aa20.37■□□□□ 0.85
SF3A1-205ENST00000463818 C1orf210Q8IVY1 113 aa20.37■□□□□ 0.85
SF3A1-205ENST00000463818 CCDC65Q8IXS2 484 aa20.37■□□□□ 0.85
SF3A1-205ENST00000463818 THEM5Q8N1Q8 247 aa20.37■□□□□ 0.85
SF3A1-205ENST00000463818 SHKBP1Q8TBC3 707 aa20.37■□□□□ 0.85
SF3A1-205ENST00000463818 NKD2Q969F2 451 aaPredicted RBP20.37■□□□□ 0.85
SF3A1-205ENST00000463818 TRMT61BQ9BVS5 477 aaKnown RBP20.37■□□□□ 0.85
SF3A1-205ENST00000463818 ZCWPW1Q9H0M4 648 aa20.37■□□□□ 0.85
SF3A1-205ENST00000463818 PTPRZ1P23471 2315 aaPredicted RBP20.36■□□□□ 0.85
SF3A1-205ENST00000463818 GOLGA8IPA6NC78 632 aa20.36■□□□□ 0.85
SF3A1-205ENST00000463818 GOLGA8JA6NMD2 632 aa20.36■□□□□ 0.85
SF3A1-205ENST00000463818 SOAT2O75908 522 aa20.36■□□□□ 0.85
SF3A1-205ENST00000463818 VIPR2P41587 438 aa20.36■□□□□ 0.85
SF3A1-205ENST00000463818 CDR1P51861 262 aa20.36■□□□□ 0.85
SF3A1-205ENST00000463818 TFAMQ00059 246 aaKnown RBP20.36■□□□□ 0.85
SF3A1-205ENST00000463818 SLC39A12Q504Y0 691 aa20.36■□□□□ 0.85
SF3A1-205ENST00000463818 WSCD1Q658N2 575 aa20.36■□□□□ 0.85
SF3A1-205ENST00000463818 DNAJB7Q7Z6W7 309 aaPredicted RBP20.36■□□□□ 0.85
SF3A1-205ENST00000463818 TMC8Q8IU68 726 aa20.36■□□□□ 0.85
SF3A1-205ENST00000463818 BRSK2Q8IWQ3 736 aa20.36■□□□□ 0.85
SF3A1-205ENST00000463818 TTC9BQ8N6N2 239 aa20.36■□□□□ 0.85
SF3A1-205ENST00000463818 ZSCAN18Q8TBC5 510 aaPredicted RBP20.36■□□□□ 0.85
SF3A1-205ENST00000463818 CBWD1Q9BRT8 395 aa20.36■□□□□ 0.85
SF3A1-205ENST00000463818 OSBPL6Q9BZF3 934 aa20.36■□□□□ 0.85
SF3A1-205ENST00000463818 LRRC27Q9C0I9 530 aa20.36■□□□□ 0.85
SF3A1-205ENST00000463818 GPR88Q9GZN0 384 aa20.36■□□□□ 0.85
SF3A1-205ENST00000463818 PCIF1Q9H4Z3 704 aa20.36■□□□□ 0.85
SF3A1-205ENST00000463818 TMEM206Q9H813 350 aa20.36■□□□□ 0.85
SF3A1-205ENST00000463818 BRD9Q9H8M2 597 aa20.36■□□□□ 0.85
SF3A1-205ENST00000463818 LTB4R2Q9NPC1 389 aa20.36■□□□□ 0.85
SF3A1-205ENST00000463818 HEBP1Q9NRV9 189 aa20.36■□□□□ 0.85
SF3A1-205ENST00000463818 ASB3Q9Y575 518 aa20.36■□□□□ 0.85
SF3A1-205ENST00000463818 PDCD11Q14690 1871 aaKnown RBP20.36■□□□□ 0.85
SF3A1-205ENST00000463818 A0A1W2PRU2 124 aa20.35■□□□□ 0.85
SF3A1-205ENST00000463818 KPNA7A9QM74 516 aa20.35■□□□□ 0.85
SF3A1-205ENST00000463818 EXTL3O43909 919 aa20.35■□□□□ 0.85
SF3A1-205ENST00000463818 PSMC3P17980 439 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms