RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 DNAJC25Q9H1X3 360 aa15.78■□□□□ 0.12
SMC1A-204ENST00000463684 SH2B1Q9NRF2 756 aaPredicted RBP15.78■□□□□ 0.12
SMC1A-204ENST00000463684 KIAA1024Q9UPX6 916 aa15.78■□□□□ 0.12
SMC1A-204ENST00000463684 SLC27A5Q9Y2P5 690 aa15.78■□□□□ 0.12
SMC1A-204ENST00000463684 PCDHGA5Q9Y5G8 931 aa15.78■□□□□ 0.12
SMC1A-204ENST00000463684 USP24Q9UPU5 2620 aa15.77■□□□□ 0.12
SMC1A-204ENST00000463684 OR6C75A6NL08 312 aa15.77■□□□□ 0.12
SMC1A-204ENST00000463684 M0QZQ0 153 aa15.77■□□□□ 0.12
SMC1A-204ENST00000463684 PROZP22891 400 aa15.77■□□□□ 0.12
SMC1A-204ENST00000463684 GABRR2P28476 465 aa15.77■□□□□ 0.12
SMC1A-204ENST00000463684 HOXC13P31276 330 aa15.77■□□□□ 0.12
SMC1A-204ENST00000463684 TNK2Q07912 1038 aa15.77■□□□□ 0.12
SMC1A-204ENST00000463684 GRSF1Q12849 480 aaKnown RBP eCLIP15.77■□□□□ 0.12
SMC1A-204ENST00000463684 STRN3Q13033 797 aa15.77■□□□□ 0.12
SMC1A-204ENST00000463684 ORC2Q13416 577 aaPredicted RBP15.77■□□□□ 0.12
SMC1A-204ENST00000463684 ECM1Q16610 540 aa15.77■□□□□ 0.12
SMC1A-204ENST00000463684 SLC10A6Q3KNW5 377 aa15.77■□□□□ 0.12
SMC1A-204ENST00000463684 RNF43Q68DV7 783 aa15.77■□□□□ 0.12
SMC1A-204ENST00000463684 DSTYKQ6XUX3 929 aa15.77■□□□□ 0.12
SMC1A-204ENST00000463684 DNAJB7Q7Z6W7 309 aaPredicted RBP15.77■□□□□ 0.12
SMC1A-204ENST00000463684 ITIH5Q86UX2 942 aa15.77■□□□□ 0.12
SMC1A-204ENST00000463684 PSMG2Q969U7 264 aa15.77■□□□□ 0.12
SMC1A-204ENST00000463684 DRC1Q96MC2 740 aa15.77■□□□□ 0.12
SMC1A-204ENST00000463684 VPS45Q9NRW7 570 aa15.77■□□□□ 0.12
SMC1A-204ENST00000463684 DDX19AQ9NUU7 478 aaKnown RBP15.77■□□□□ 0.12
SMC1A-204ENST00000463684 ARHGAP28Q9P2N2 729 aa15.77■□□□□ 0.12
SMC1A-204ENST00000463684 LRWD1Q9UFC0 647 aa15.77■□□□□ 0.12
SMC1A-204ENST00000463684 TUBGCP4Q9UGJ1 667 aa15.77■□□□□ 0.12
SMC1A-204ENST00000463684 STK24Q9Y6E0 443 aa15.77■□□□□ 0.12
SMC1A-204ENST00000463684 CHD6Q8TD26 2715 aa15.76■□□□□ 0.11
SMC1A-204ENST00000463684 HIP1RO75146 1068 aa15.76■□□□□ 0.11
SMC1A-204ENST00000463684 AKAP3O75969 853 aa15.76■□□□□ 0.11
SMC1A-204ENST00000463684 VNN2O95498 520 aa15.76■□□□□ 0.11
SMC1A-204ENST00000463684 MPLP40238 635 aa15.76■□□□□ 0.11
SMC1A-204ENST00000463684 PLA2G2CQ5R387 149 aa15.76■□□□□ 0.11
SMC1A-204ENST00000463684 CENPPQ6IPU0 288 aa15.76■□□□□ 0.11
SMC1A-204ENST00000463684 ARMCX5Q6P1M9 558 aa15.76■□□□□ 0.11
SMC1A-204ENST00000463684 GAREM2Q75VX8 874 aa15.76■□□□□ 0.11
SMC1A-204ENST00000463684 TAS1R3Q7RTX0 852 aa15.76■□□□□ 0.11
SMC1A-204ENST00000463684 NSUN7Q8NE18 718 aaKnown RBP15.76■□□□□ 0.11
SMC1A-204ENST00000463684 GTF3C6Q969F1 213 aa15.76■□□□□ 0.11
SMC1A-204ENST00000463684 ZBTB45Q96K62 511 aaPredicted RBP15.76■□□□□ 0.11
SMC1A-204ENST00000463684 ZC3H10Q96K80 434 aaKnown RBP15.76■□□□□ 0.11
SMC1A-204ENST00000463684 MKNK1Q9BUB5 465 aa15.76■□□□□ 0.11
SMC1A-204ENST00000463684 CRISPLD1Q9H336 500 aa15.76■□□□□ 0.11
SMC1A-204ENST00000463684 TASP1Q9H6P5 420 aa15.76■□□□□ 0.11
SMC1A-204ENST00000463684 C17orf75Q9HAS0 396 aa15.76■□□□□ 0.11
SMC1A-204ENST00000463684 PLEKHA5Q9HAU0 1116 aa15.76■□□□□ 0.11
SMC1A-204ENST00000463684 ANKFY1Q9P2R3 1169 aa15.76■□□□□ 0.11
SMC1A-204ENST00000463684 DNM3Q9UQ16 869 aa15.76■□□□□ 0.11
SMC1A-204ENST00000463684 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.76■□□□□ 0.11
SMC1A-204ENST00000463684 ABLIM1O14639 778 aa15.75■□□□□ 0.11
SMC1A-204ENST00000463684 SLC16A4O15374 487 aa15.75■□□□□ 0.11
SMC1A-204ENST00000463684 MEFVO15553 781 aaPredicted RBP15.75■□□□□ 0.11
SMC1A-204ENST00000463684 TOM1L1O75674 476 aa15.75■□□□□ 0.11
SMC1A-204ENST00000463684 WEE1P30291 646 aa15.75■□□□□ 0.11
SMC1A-204ENST00000463684 MATR3P43243 847 aaKnown RBP eCLIP15.75■□□□□ 0.11
SMC1A-204ENST00000463684 MCM2P49736 904 aa15.75■□□□□ 0.11
SMC1A-204ENST00000463684 CACNB1Q02641 598 aaPredicted RBP15.75■□□□□ 0.11
SMC1A-204ENST00000463684 MYBPC2Q14324 1141 aa15.75■□□□□ 0.11
SMC1A-204ENST00000463684 NOLC1Q14978 699 aaKnown RBP eCLIP15.75■□□□□ 0.11
SMC1A-204ENST00000463684 ME3Q16798 604 aa15.75■□□□□ 0.11
SMC1A-204ENST00000463684 SEZ6Q53EL9 994 aa15.75■□□□□ 0.11
SMC1A-204ENST00000463684 OVOS1Q6IE37 1185 aa15.75■□□□□ 0.11
SMC1A-204ENST00000463684 PSAPL1Q6NUJ1 521 aa15.75■□□□□ 0.11
SMC1A-204ENST00000463684 CAMKK1Q8N5S9 505 aa15.75■□□□□ 0.11
SMC1A-204ENST00000463684 ATAD1Q8NBU5 361 aa15.75■□□□□ 0.11
SMC1A-204ENST00000463684 KIF12Q96FN5 646 aa15.75■□□□□ 0.11
SMC1A-204ENST00000463684 GCNAQ96QF7 691 aa15.75■□□□□ 0.11
SMC1A-204ENST00000463684 SMOC1Q9H4F8 434 aa15.75■□□□□ 0.11
SMC1A-204ENST00000463684 GKN1Q9NS71 199 aa15.75■□□□□ 0.11
SMC1A-204ENST00000463684 KCNG1Q9UIX4 513 aa15.75■□□□□ 0.11
SMC1A-204ENST00000463684 MTMR11A4FU01 709 aa15.74■□□□□ 0.11
SMC1A-204ENST00000463684 CLDN3O15551 220 aa15.74■□□□□ 0.11
SMC1A-204ENST00000463684 JAK2O60674 1132 aa15.74■□□□□ 0.11
SMC1A-204ENST00000463684 LRPAP1P30533 357 aa15.74■□□□□ 0.11
SMC1A-204ENST00000463684 FXR2P51116 673 aaKnown RBP eCLIP15.74■□□□□ 0.119e-7■■■□□ 19.2
SMC1A-204ENST00000463684 AMPD2Q01433 879 aa15.74■□□□□ 0.11
SMC1A-204ENST00000463684 PDIA5Q14554 519 aa15.74■□□□□ 0.11
SMC1A-204ENST00000463684 VEPH1Q14D04 833 aa15.74■□□□□ 0.11
SMC1A-204ENST00000463684 ELF2Q15723 593 aa15.74■□□□□ 0.11
SMC1A-204ENST00000463684 TAF12Q16514 161 aa15.74■□□□□ 0.11
SMC1A-204ENST00000463684 PKN3Q6P5Z2 889 aa15.74■□□□□ 0.11
SMC1A-204ENST00000463684 DAW1Q8N136 415 aa15.74■□□□□ 0.11
SMC1A-204ENST00000463684 RAB34Q9BZG1 259 aa15.74■□□□□ 0.11
SMC1A-204ENST00000463684 HSFX1Q9UBD0 423 aa15.74■□□□□ 0.11
SMC1A-204ENST00000463684 UBQLN1Q9UMX0 589 aaKnown RBP15.74■□□□□ 0.11
SMC1A-204ENST00000463684 RALGAPA1Q6GYQ0 2036 aa15.73■□□□□ 0.11
SMC1A-204ENST00000463684 E9PMD0 336 aa15.73■□□□□ 0.11
SMC1A-204ENST00000463684 XPOTO43592 962 aaKnown RBP15.73■□□□□ 0.11
SMC1A-204ENST00000463684 SOAT2O75908 522 aa15.73■□□□□ 0.11
SMC1A-204ENST00000463684 RHOBTB1O94844 696 aa15.73■□□□□ 0.11
SMC1A-204ENST00000463684 PRAMEF12O95522 483 aa15.73■□□□□ 0.11
SMC1A-204ENST00000463684 CLTAP09496 248 aa15.73■□□□□ 0.11
SMC1A-204ENST00000463684 CXCL8P10145 99 aa15.73■□□□□ 0.11
SMC1A-204ENST00000463684 TYMPP19971 482 aa15.73■□□□□ 0.11
SMC1A-204ENST00000463684 CYP3A5P20815 502 aa15.73■□□□□ 0.11
SMC1A-204ENST00000463684 CDC25CP30307 473 aa15.73■□□□□ 0.11
SMC1A-204ENST00000463684 TUFMP49411 452 aaKnown RBP15.73■□□□□ 0.11
SMC1A-204ENST00000463684 NOVA1P51513 510 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms